Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,563,575 A→T 8.8% Y224* (TAT→TAA)  hflX ← GTPase HflX

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,563,5750AT 8.8% 156.0 / 4.0 56Y224* (TAT→TAA) hflXGTPase HflX
Reads supporting (aligned to +/- strand):  ref base A (16/35);  new base T (3/2);  total (19/37)
Fisher's exact test for biased strand distribution p-value = 3.24e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TTCGAGCGTAGCCCGAAATGCCTCGACCAGCTTGTGCGGCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTGGTATAACCCACCAGCGACACCGAGGGGATATCCGCGCGCTTGCGCCCGCGACGCGCCTGCTCACGCTGGCTGCGCACTTTCTCCAGGCGCGACTTGA  >  NC_002947/5563428‑5563723
                                                                                                                                                   |                                                                                                                                                    
ttCGAGCGTAGCCCGAAATGCCTCGACCAGCTTGTGCGGCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCa                                                                                                                                                      >  3:265920/1‑148 (MQ=255)
    aGCGTAGCCCGAAATGCCTCGACCAGCTTGTGCGGCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATacac                                                                                                                                                 >  3:148282/1‑149 (MQ=255)
       gTAGCCCGAAATGCCTCGACCAGCTTGTGCGGCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTc                                                                                                                                              <  7:65608/149‑1 (MQ=255)
          gCCCGAAATGCCTCGACCAGCTTGTGCGGCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGa                                                                                                                                           <  2:84409/149‑1 (MQ=255)
            ccGAAATGCCTCGACCAGCTTGTGCGGCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGAtt                                                                                                                                         <  6:263032/149‑1 (MQ=255)
              gAAATGCCTCGACCAGCTTGTGCGGCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCg                                                                                                                                       >  2:288695/1‑149 (MQ=255)
                aaTGCCTCGACCAGCTTGTGCGGCAGGTTGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCgg                                                                                                                                      <  6:271546/148‑1 (MQ=255)
                    ccTCGACCAGCTTGTGCGGCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAgg                                                                                                                                 <  7:140935/149‑1 (MQ=255)
                     cTCGACCAGCTTGTGCGGCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCTTACACCTCGGATTCGGTCAggg                                                                                                                                >  6:160609/1‑149 (MQ=255)
                     cTCGACCAGCTTGTGCGGCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCTTACACCTCGGATTCGGTCAggg                                                                                                                                >  6:166195/1‑149 (MQ=255)
                         aCCAGCTTGTGCGGCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGtt                                                                                                                            <  5:132893/149‑1 (MQ=255)
                         aCCAGCTTGTGCGGCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGtt                                                                                                                            <  8:285001/149‑1 (MQ=255)
                          ccAGCTTGTGCGGCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTg                                                                                                                           <  3:150468/149‑1 (MQ=255)
                             gCTTGTGCGGCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCTTACACCTCGGATTCGGTCAGGGCGTTGAAc                                                                                                                        <  5:160609/149‑1 (MQ=255)
                             gCTTGTGCGGCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCTTACACCTCGGATTCGGTCAGGGCGTTGAAc                                                                                                                        <  5:166195/149‑1 (MQ=255)
                              cTTGTGCGGCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGaa                                                                                                                         >  8:210899/1‑147 (MQ=255)
                              cTTGTGCGGCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACa                                                                                                                       <  2:7126/149‑1 (MQ=255)
                              cTTGTGCGGCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACa                                                                                                                       <  6:343804/149‑1 (MQ=255)
                               ttGTGCGGCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAg                                                                                                                      >  2:47376/1‑149 (MQ=255)
                               ttGTGCGGCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAg                                                                                                                      >  4:17957/1‑149 (MQ=255)
                                 gtgCGGCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTTAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGc                                                                                                                     <  7:67837/148‑1 (MQ=255)
                                    cGGCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTgg                                                                                                                 <  4:123620/149‑1 (MQ=255)
                                    cGGCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTg                                                                                                                  <  3:247116/148‑1 (MQ=255)
                                    cGGCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTg                                                                                                                  <  1:263586/148‑1 (MQ=255)
                                      gCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGAc                                                                                                               >  7:172764/1‑149 (MQ=255)
                                      gCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGAc                                                                                                               <  7:342596/149‑1 (MQ=255)
                                           tGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGcc                                                                                                          <  7:210899/149‑1 (MQ=255)
                                            ggCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGGAGGGTCGGGTCGCGGGTGGCGAACCACTGGTCCGCGGCTTACACATCGGATTGGGTCAGGGCGTTGAGCAGCGTGGACtgggcg                                                                                                         >  8:317622/1‑144 (MQ=255)
                                                 aTGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCTCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGtt                                                                                                    <  1:288695/149‑1 (MQ=255)
                                                  tGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTg                                                                                                   <  8:55177/149‑1 (MQ=255)
                                                  tGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTg                                                                                                   <  1:47376/149‑1 (MQ=255)
                                                   gAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGGCGAGGGTGGCGAACAACTGGTCCGCGGCATACCCGGCGGATTCGGTCAGGGCGTTGAACAGCGTGGCCTTGCCGGCGTTgg                                                                                                  >  4:56941/1‑149 (MQ=255)
                                                     aGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTGGta                                                                                                <  4:265920/149‑1 (MQ=255)
                                                      gCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTGGtat                                                                                               <  6:165217/149‑1 (MQ=255)
                                                        cTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTGGTATaa                                                                                             <  2:264231/149‑1 (MQ=255)
                                                           cGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTGGTATAAcc                                                                                           >  2:73367/1‑148 (MQ=255)
                                                                  ggCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTGGTATAACCCACCAGc                                                                                    <  8:172764/148‑1 (MQ=255)
                                                                   gCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTGGTATAACCCACCAGCGa                                                                                  >  5:384574/1‑149 (MQ=255)
                                                                      aGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTGGTATAACCCACCAGCGacac                                                                               >  6:314086/1‑149 (MQ=255)
                                                                          cGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTGGTATAACCCACCAGCGACACCGAg                                                                           <  2:234938/149‑1 (MQ=255)
                                                                          cGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTAGGGTCGAGGGGGGAGAACAACTGGGCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTGGTATAACCCACCAGCGACACCGAg                                                                           <  6:382193/149‑1 (MQ=255)
                                                                           gATCGGCCCCAGGGCGTTGTTCTCCAGCCGGCGGAGGGTCGGGTCGTTGGGGGCGTACAACTGGTCCGCGGCATACACCTCGGATTGGGTCAGGGCGTTGTAAACCCGGGTCTTGCCGGCCTTTGTATAACCCACCATCGAAAACGAgg                                                                          <  8:288595/149‑1 (MQ=255)
                                                                            accGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTGGTATAACCCACCAGCGACACCGAggg                                                                         <  5:329007/147‑1 (MQ=255)
                                                                             tCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTGGTATAACCCACCAGCGACACCGAggg                                                                         <  2:343652/148‑1 (MQ=255)
                                                                                   ccAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTGGTATAACCCACCAGCGACACCGAGGGGATATcc                                                                  >  8:114390/1‑149 (MQ=255)
                                                                                         cGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCTAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTGGTATAACCCACCAGCGACACCGAGGGGATATCCgcgcgc                                                            <  5:314086/149‑1 (MQ=255)
                                                                                             gAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTGGTATAACCCACCAGCGACACCGAGGGGATATCCGCGCGCTTg                                                         <  3:56941/148‑1 (MQ=255)
                                                                                                  cGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTGGTATAACCCACCAGCGACACCGAGGGGATATCCGCGCGCTTGCGCCcg                                                   >  3:343503/1‑149 (MQ=255)
                                                                                                          cgcAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTGGTATAACCCACCAGCGACACCGAGGGGATATCCGCGCGCTTGCGCCCGCGACgcgc                                           <  1:73367/149‑1 (MQ=255)
                                                                                                                gtcgggtcgAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTGGTATAACCCACCAGCGACACCGAGGGGATATCCGCGCGCTTGCGCCCGCGACGCGCCTGCTc                                     <  4:343503/149‑1 (MQ=255)
                                                                                                                             tGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGCACAGCGTCGACCTGCCGGCGTTGGTATAACCCACCAGCGTCACCGAGGGGATTTCCGCGCGCTTGCGCCCGCGACGCGCCTGCTCACGCTGGCTgcgc                        <  7:218037/149‑1 (MQ=255)
                                                                                                                                    caacTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTGGTATAACCCACCAGCGACACCGAGGGGATATCCGCGCGCTTGCGCCCGCGACGCGCCTGCTCACGCTGGCTgcg                         >  2:89843/1‑141 (MQ=255)
                                                                                                                                    caacTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTGGTATAACCCACCAGCGACACCGAGGGGATATCCGCGCGCTTGCGCCCGCGACGCGCCTGCTCACGCTGGCTgcg                         <  1:89843/141‑1 (MQ=255)
                                                                                                                                     aacTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACATGCCGGCGTTGGTATAACCCACCAGCGACACCGAGGGGATATCCGCGCGCTTGCGCCCGCGACGCGCCTGCTCACGCTGGCTGCGCACTTtctc                >  5:372463/1‑149 (MQ=255)
                                                                                                                                          gTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTGGTATAACCCACCAGCGACACCCAGGGGATATCCGCGCGCTTGCGCCCGCGACGCGCCTGCTCACGCTGGCTGCGCACTTTCTCCAGgc           >  2:82172/1‑149 (MQ=255)
                                                                                                                                           tCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTGGTATAACCCACCAGCGACACCGAGGGGATATCCGCGCGCTTGCGCCCGCGACGCGCCTGCTCACGCTGGCTGCGCACTTTCTCCAGgcg          >  2:265924/1‑149 (MQ=255)
                                                                                                                                               cgGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTGGTATAACCCACCAGCGACACCGAGGGGATATCCGCGCGCTTGCGCCCGCGACGCGCCTGCTCACGCTGGCTGCGCACTTTCTCCAGGCGCGAc      <  4:148282/149‑1 (MQ=255)
                                                                                                                                                   aTACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTGGTATAACCCACCAGCGACACCGAGGGGATATCCGCGCGCTTGCGCCCGCGACGCGCCTGCTCACGCTGGCTGCGCACTTTCTCCAGGCGCGACTTGa  <  3:17957/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
TTCGAGCGTAGCCCGAAATGCCTCGACCAGCTTGTGCGGCAGGTGGCGAATGAAGCCTACGGTGTCGGCCAGCACGATCGGCCCCAGGTCGTTGAGCTCGAGCCGGCGCAGGGTCGGGTCGAGGGTGGCGAACAACTGGTCCGCGGCATACACCTCGGATTCGGTCAGGGCGTTGAACAGCGTGGACTTGCCGGCGTTGGTATAACCCACCAGCGACACCGAGGGGATATCCGCGCGCTTGCGCCCGCGACGCGCCTGCTCACGCTGGCTGCGCACTTTCTCCAGGCGCGACTTGA  >  NC_002947/5563428‑5563723

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑