| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,824,715 | C→A | 5.9% | intergenic (+139/+35) | PP_5102 → / ← trmB | hypothetical protein/tRNA (guanosine(46)‑N7)‑methyltransferase TrmB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,824,715 | 0 | C | A | 5.9% | 318.5 / 7.9 | 101 | intergenic (+139/+35) | PP_5102/trmB | hypothetical protein/tRNA (guanosine(46)‑N7)‑methyltransferase TrmB |
| Reads supporting (aligned to +/- strand): ref base C (50/45); new base A (4/2); total (54/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.88e-02 | |||||||||||
Only 100 of 102 total aligned reads displayed.
CGCGGCTGAGCGAATGACCCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCGGCACATAGGTGCCGTCTG > NC_002947/5824568‑5824862 | cgcgGCTGAGCGAATGACCCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCa < 3:119859/149‑1 (MQ=255) gcgGCTGAGCGAATGACCCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCac < 4:323738/149‑2 (MQ=255) ggCTGAGCGAATGACTCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAggg < 2:303374/149‑1 (MQ=255) gCTGAGCGAATGACCCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑c > 2:158870/1‑149 (MQ=255) gAGCGAATGACCCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGt < 4:97443/149‑1 (MQ=255) gAATGACCCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑a > 8:173432/1‑149 (MQ=255) gAATGACCCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTGAAAAGGG‑CGGttttt > 1:30007/1‑148 (MQ=255) aaTGACCCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCTGGCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑a > 1:81556/1‑149 (MQ=255) aaTGACCCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑Ac < 3:258463/149‑1 (MQ=255) aaTGACCCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑Ac < 2:240962/149‑1 (MQ=255) aaTGACCCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTGAAAAGGG‑CGGtttttt < 2:30007/149‑3 (MQ=255) aCCCCTTGTGGGAGCGGATTCAACCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGttttttctt < 8:42779/148‑6 (MQ=255) gTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGcc < 7:173432/148‑1 (MQ=255) gTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGc < 2:81556/147‑1 (MQ=255) gAGCGGATTCAACCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGcc < 8:127000/144‑1 (MQ=255) gAGCGGATTCAACCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGcc > 7:127000/1‑144 (MQ=255) gAGCGGATTCAACCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTAt > 1:194860/1‑148 (MQ=255) aGCGGATTCAACCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTAt > 8:351724/1‑147 (MQ=255) aGCGGATTCAACCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTAt > 2:248607/1‑147 (MQ=255) gATTCAACCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCTGCCg > 7:80964/1‑149 (MQ=255) gATTCAACCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCg < 2:194860/149‑1 (MQ=255) aaCCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAACGGCCGTATCAGCCGCTCaa > 4:173138/1‑149 (MQ=255) aaCCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCaa < 1:158870/149‑1 (MQ=255) aaCCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCa > 7:40204/1‑148 (MQ=255) aCCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAAt > 3:272994/1‑149 (MQ=255) gcgAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCACGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCa > 1:110658/1‑149 (MQ=255) gAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCAcc > 7:307307/1‑149 (MQ=255) aGGGCCGGTTTT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTtc < 1:316986/149‑1 (MQ=255) ggccggccCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTtctc < 6:363127/149‑1 (MQ=255) cggccCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGaa < 5:368701/149‑1 (MQ=255) ccT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACtt > 2:85126/1‑148 (MQ=255) gctgGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAg > 2:89309/1‑149 (MQ=255) ctgGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGGCCGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCaa < 1:98003/148‑1 (MQ=255) tgGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTc > 3:285219/1‑149 (MQ=255) gCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTcc < 5:209372/148‑1 (MQ=255) cAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGt > 1:95507/1‑144 (MQ=255) cAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGt < 2:95507/144‑1 (MQ=255) cAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCca > 8:114410/1‑148 (MQ=255) cAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCca > 5:171841/1‑148 (MQ=255) aaTCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTGAAAAGGG‑CGGttttt < 6:112096/95‑2 (MQ=18) aaTCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTGAAAAGGG‑CGGttttt > 5:112096/1‑94 (MQ=18) aTCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCacac > 4:205177/1‑149 (MQ=255) tctcCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACAcc > 5:351604/1‑149 (MQ=255) tcCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACAcccc > 4:259292/1‑149 (MQ=255) tcCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACAcccc > 5:345268/1‑149 (MQ=255) cACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCATTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGACGCTCAATCCACCATCTCGAACTTCAAGTCCCACCCCCCGt > 6:364946/1‑149 (MQ=255) aCCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTg > 8:211748/1‑149 (MQ=255) ccGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGCGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGcc > 8:199447/1‑149 (MQ=255) cTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGc > 7:114710/1‑149 (MQ=255) cACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCTATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCg < 1:265069/148‑1 (MQ=255) aCCGGGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGc < 8:3295/148‑1 (MQ=255) cGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCa < 7:114410/149‑1 (MQ=255) tGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAAACGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCAcc > 6:290847/1‑149 (MQ=255) ggCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑AGCGAAAAGGCCGTATCAGACGCTCAATCCACAATCTCGAACTTCAAGTCACACACCCCGTGCACCAGCCGCGCAAcgg > 4:12124/1‑148 (MQ=38) gcTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGtt > 8:57822/1‑149 (MQ=255) gcTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGtt < 5:364946/149‑1 (MQ=255) cTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTc < 3:259292/149‑1 (MQ=255) cTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTc < 5:290847/149‑1 (MQ=255) ccGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGaa > 2:245132/1‑149 (MQ=255) ccGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGaa < 4:285219/149‑1 (MQ=255) cGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAAc > 8:164816/1‑149 (MQ=255) cGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGACCCAGCCGCTCACCGCGGCGTTCGAAc > 4:264068/1‑149 (MQ=255) tATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACtt > 8:248093/1‑149 (MQ=255) ttCGCGTGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTCTCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTg < 6:138048/148‑1 (MQ=255) ttCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTgg > 7:163924/1‑149 (MQ=255) ttCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTgg > 7:159035/1‑149 (MQ=255) ttCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTgg < 6:345268/149‑1 (MQ=255) ttCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTg < 2:110658/148‑1 (MQ=255) ttCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTg < 7:164816/148‑1 (MQ=255) ttCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTg < 3:176302/148‑1 (MQ=255) ttCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTg < 4:272994/148‑1 (MQ=255) gcgGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTTAACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGt > 1:97409/1‑148 (MQ=255) gggTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATc < 7:351724/149‑1 (MQ=255) gTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCgg < 8:40204/149‑1 (MQ=255) aaCCCGCTCCTACAAAGAAAAAACCTCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGgc < 8:307307/148‑1 (MQ=255) aCCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGgcgc < 6:171841/149‑1 (MQ=255) cccGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGct > 1:241539/1‑149 (MQ=255) ccGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGctc > 6:24006/1‑149 (MQ=255) tCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGACCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCg > 5:289481/1‑149 (MQ=255) cTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCg < 8:114710/147‑1 (MQ=255) cTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCg < 1:245132/147‑1 (MQ=255) aaaGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAACGGCCGTATCAGCCGCTCACTCCACGTTCTCGAACTTCAAGTCCCCCACCGCGTGGCCCAGCCGCTCACCGCGGCGTTCGAACAGGGTGCGCGGGCGCTCATCGGGgcgc > 4:280297/1‑149 (MQ=255) aaaGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCCCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGgcgc > 8:218525/1‑149 (MQ=255) aaGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGcgcg > 5:60953/1‑149 (MQ=255) aGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCgg > 6:54836/1‑149 (MQ=255) aGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCgg < 3:205177/149‑1 (MQ=255) aGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCgg > 5:363070/1‑149 (MQ=255) ggtaaaaCCGCCCTGAAAAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTATTCGGCGCGCGGc > 6:308002/4‑149 (MQ=255) gAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCGGc < 7:49192/149‑1 (MQ=255) aaaaaaCCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAACCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCGGca > 4:336692/1‑149 (MQ=255) aaaaCCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCGGcaca < 3:12124/149‑1 (MQ=255) aaaaCCGCCCTGAAAAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCGGcaca > 1:268428/1‑149 (MQ=255) aCCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGgcgc < 3:54322/140‑1 (MQ=255) aCCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCGGCACATAg < 6:351604/149‑1 (MQ=255) aCCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACAACCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGgcgc > 4:54322/1‑140 (MQ=255) cGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCGGCACATAGGt < 7:97033/149‑1 (MQ=255) cGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCGGCACATAGGt < 7:199447/149‑1 (MQ=255) gCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCGGCACATAGGTg > 2:13330/1‑149 (MQ=255) cTTTTCACGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCGGCACATAGGTGCCg < 3:148181/149‑1 (MQ=255) cAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAACCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCGGCACATAGGTGCCGTCTg < 3:336692/148‑1 (MQ=255) | CGCGGCTGAGCGAATGACCCCTTGTAGGAGCGGATTCAACCGCGAAAGGGCCGGCCCT‑GCTGGCCAATCTCCACCCGCCCTTCACCGTGGGCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACAAAGAAAAAACCGCCCTTTTCAGGG‑CGGTTTT‑ACCGAAAAGGCCGTATCAGCCGCTCAATCCACCTTCTCGAACTTCAAGTCCCACACCCCGTGCCCCAGCCGCTCACCGCGGCGTTCGAACTTGGTGATCGGGCGCTCTTCGGGGCGCGGCACATAGGTGCCGTCTG > NC_002947/5824568‑5824862 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |