| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,079,451 | T→G | 5.8% | intergenic (‑226/‑136) | PP_5330 ← / → PP_5331 | MFS transporter/acyl‑CoA thioesterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,079,451 | 0 | T | G | 5.8% | 277.5 / 5.4 | 86 | intergenic (‑226/‑136) | PP_5330/PP_5331 | MFS transporter/acyl‑CoA thioesterase |
| Reads supporting (aligned to +/- strand): ref base T (38/43); new base G (2/3); total (40/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
GAGCTACGCCGAAAGCGATACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGCCCCATCGCATGATTGAGC > NC_002947/6079309‑6079596 | gAGCTACGCCGAAAGCGATACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAg < 4:216754/149‑1 (MQ=255)gAGCTACGCCGAAAGCGATACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAg < 6:76297/149‑1 (MQ=255) aGCTACGCCGAAAGCGATACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAgg > 3:15679/1‑149 (MQ=255) cTACGCCGAAAGCGATACAAAATCCCCACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTCTGGCCTATATACTGGCGACTCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCg < 7:253696/149‑1 (MQ=255) cTACGCCGAAAGCGATACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCg < 1:276937/149‑1 (MQ=255) aCGCCGAAAGCGATACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAACCGCCTGACAATAGTGACCGGCgtt > 5:188313/1‑147 (MQ=255) aCGCCGAAAGCGATACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGt > 1:215019/1‑149 (MQ=255) cGCCGAAAGCGATACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCgg < 4:15679/147‑1 (MQ=255) cGCCGAAAGCGATACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGGGCGAAAACGCCGGTCACTATTGTCAGGCgg < 1:51050/147‑1 (MQ=255) gAAAGCGATACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAACCGCCTGACAATAGTGACCGGCGTTTTCGc < 6:188313/149‑1 (MQ=38) aaaGCGATACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAACCGCCTGACAATAGTGACCGGCGTTTTCGCa < 6:171519/149‑1 (MQ=38) aaaGCGATACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCg > 7:232419/1‑147 (MQ=255) aaaGCGATACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCa < 8:232419/149‑1 (MQ=255) aaaGCGATACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCa < 6:235112/149‑1 (MQ=255) aaGCGATACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAACCGCCTGACAATAGTGACCGGCGTTTTCGCa < 8:132384/148‑1 (MQ=38) aGCGATACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCaga < 4:191449/149‑1 (MQ=255) aTACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCCCATGCCGTTATGCCCTATATCCTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGttt < 8:173944/149‑1 (MQ=255) tACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTc < 2:215019/149‑1 (MQ=255) tACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTc > 4:150149/1‑149 (MQ=255) tACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTc > 6:33129/1‑149 (MQ=255) aCAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTcc > 2:101125/1‑149 (MQ=255) cAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTccc < 7:113867/149‑1 (MQ=255) cAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTccc > 3:318785/1‑149 (MQ=255) cAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTcc < 2:287319/148‑1 (MQ=255) aaaaTCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCt < 8:136954/149‑1 (MQ=255) tCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACgg < 3:91460/149‑1 (MQ=255) acacaGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGgccg > 5:304326/1‑149 (MQ=255) acaGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGgccgcc > 2:42407/1‑149 (MQ=255) acaGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGgccgcc > 1:200617/1‑149 (MQ=255) caGATATTCGTGAATGCGCGGTCGTCGCTGTCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTACTAACGTGGGATGTTGTGCGAAAACGCAGGTCAATATTGTCAGGCGGTTTCTCAGAGTTTCCCTACgaagatt > 8:218210/1‑142 (MQ=255) aGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAAGGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACTGCCGccct > 8:263471/1‑148 (MQ=255) aGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGccct > 6:15699/1‑148 (MQ=255) atTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTg > 6:181599/1‑148 (MQ=255) gTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAAc < 2:197513/148‑1 (MQ=255) aaTGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGaa > 4:274426/1‑148 (MQ=255) aaTGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGCATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGaaa > 8:258500/1‑149 (MQ=255) cgcgGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTTGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCg < 7:120030/148‑1 (MQ=255) gcgGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGgccgc > 8:89961/1‑130 (MQ=255) gcgGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGgccgc < 7:89961/130‑1 (MQ=255) cgGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGCATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCg < 7:258500/149‑1 (MQ=255) gtcgtcGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCgta < 5:276223/149‑1 (MQ=255) gtcgtcGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCgta < 5:85126/149‑1 (MQ=255) gtcgCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCgtagta > 3:308926/1‑149 (MQ=255) tcgCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTAt > 2:180307/1‑149 (MQ=255) cTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGtt < 1:180307/149‑1 (MQ=255) ccGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCaa < 2:295987/149‑1 (MQ=255) ccGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCaa < 1:101125/149‑1 (MQ=255) ccGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCaa < 2:245643/149‑1 (MQ=255) cccTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAAt < 2:200617/148‑1 (MQ=255) ccTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCg > 7:137061/1‑149 (MQ=255) ccTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCg > 5:74598/1‑149 (MQ=255) tataCTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGttt < 5:181599/148‑1 (MQ=255) tataCTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTa < 1:42407/149‑1 (MQ=255) aCTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTAccc > 1:309503/1‑149 (MQ=255) aCTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTAccc > 3:152557/1‑149 (MQ=255) cTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTAccc < 3:150149/148‑1 (MQ=255) cTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCg < 3:274426/149‑1 (MQ=255) tGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCgg > 4:56924/1‑149 (MQ=255) tGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCgg > 6:48943/1‑149 (MQ=255) gCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCgg < 8:137061/147‑1 (MQ=255) gAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCtt > 8:279153/1‑149 (MQ=255) tCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTgc < 7:285992/149‑1 (MQ=255) tCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTgc < 3:56924/149‑1 (MQ=255) gTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTgcgc < 3:307671/149‑1 (MQ=255) tAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCaa > 2:47071/1‑121 (MQ=255) tAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCaa < 1:47071/121‑1 (MQ=255) tGTTGCTTCTAACGTGGGTTGTTTTGCGAAAACGCCCGTCACCATTTTGACGGGGTTTCGGATTTGTTCCCTAAGGCCGGCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAAc < 5:15699/149‑1 (MQ=255) tGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCaa < 5:48943/148‑1 (MQ=255) tGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAAc < 4:308926/149‑1 (MQ=255) gTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCaaacaaac > 5:259763/1‑148 (MQ=255) gTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAAc > 4:308810/1‑148 (MQ=255) ttGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACg > 1:12491/1‑148 (MQ=255) gCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCCAGCTGAATCGTTTAGCCGGGCTTTGCGCCACACCAACGaa > 6:292422/1‑148 (MQ=255) ccTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCTTAGTATGTTTCAGGCTGAATCGTTTACCCGGGCATTGCGCCACACCAACGAAAAGc > 2:324328/1‑149 (MQ=255) tAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCcaca < 2:246886/135‑1 (MQ=255) tAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCcaca > 1:246886/1‑135 (MQ=255) tAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGt > 5:94681/1‑149 (MQ=255) aCGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGt < 7:279153/147‑1 (MQ=255) gCGAAACCGCCTGACAATAGTGACCGGCGTTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGccc > 8:225248/1‑149 (MQ=38) gAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTAAGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGCCCCa > 5:90082/1‑149 (MQ=255) aaaaCGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGCCCCAt > 1:203905/1‑149 (MQ=255) aatcGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAATCGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGATAAGCGTCACGGGTCAGAGGCCCCATc < 1:324328/146‑1 (MQ=255) aaaCGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGTGTCAGAGGCCCCATc < 6:304326/149‑1 (MQ=255) cGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCa < 6:252674/132‑1 (MQ=255) cGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCa > 5:252674/1‑132 (MQ=255) cTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGCCCCATCGCATGATTGAGc > 5:292367/1‑149 (MQ=255) | GAGCTACGCCGAAAGCGATACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAACGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGCCCCATCGCATGATTGAGC > NC_002947/6079309‑6079596 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |