Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 543,730 | C→T | 8.0% | A657V (GCT→GTT) | rpoC → | DNA‑directed RNA polymerase subunit beta' |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 543,730 | 0 | C | T | 8.0% | 218.2 / 7.0 | 75 | A657V (GCT→GTT) | rpoC | DNA‑directed RNA polymerase subunit beta' |
Reads supporting (aligned to +/- strand): ref base C (34/35); new base T (3/3); total (37/38) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.36e-01 |
TACCGCGTGGTTGGTCTGAAAGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCGATGATGGCCAACCTCTCGAAAGAGAA > NC_002947/543585‑543874 | tACCGCGTGGTTGGTCTGAAAGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTAc > 7:295988/1‑149 (MQ=255) ttggtCTGAAAGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAGCGTTACCGAtgatgcg < 5:354928/149‑5 (MQ=255) ttggtCTGAAAGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCAGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGAtgaagtg < 3:297317/149‑1 (MQ=255) tCTGAAAGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGAtgaagtgaag > 2:236193/1‑148 (MQ=255) tGAAAGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAGCGTTACCGAtga < 6:383254/139‑1 (MQ=255) tGAAAGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAGCGTTACCGAtga > 5:383254/1‑139 (MQ=255) tGAAAGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGa > 1:16493/1‑148 (MQ=255) tGAAAGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGa > 4:60994/1‑148 (MQ=255) aaaGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGaaa < 1:236193/148‑1 (MQ=255) gagaCCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATc > 6:349014/1‑147 (MQ=255) ccGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGc < 8:298301/149‑1 (MQ=255) cGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGc > 4:141328/1‑148 (MQ=255) ttCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGc > 8:118002/1‑149 (MQ=255) gACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑gg < 8:80190/149‑1 (MQ=255) cAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCt < 1:279078/149‑1 (MQ=255) aCTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTgg > 3:259765/1‑149 (MQ=255) cTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGt < 2:300603/149‑1 (MQ=255) cTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGt < 5:292195/149‑1 (MQ=255) aTGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTaa < 6:93618/148‑1 (MQ=255) aTGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAAc > 4:350828/1‑149 (MQ=255) cacCGTTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAgg < 7:307431/149‑1 (MQ=255) cacCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAgg < 3:141328/149‑1 (MQ=255) cacCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAgg < 3:15952/149‑1 (MQ=255) cacCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAgg > 1:80315/1‑149 (MQ=255) cacCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAgg < 2:275439/149‑1 (MQ=255) acCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAggg > 5:209725/1‑149 (MQ=255) acCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGACAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAAACGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAggg > 8:314629/1‑149 (MQ=255) ccGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGc < 5:164146/149‑1 (MQ=255) cGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCt > 1:106336/1‑128 (MQ=255) cGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCt < 2:106336/128‑1 (MQ=255) cGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGCTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCg < 1:18073/149‑1 (MQ=255) tCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGaa < 4:313990/148‑1 (MQ=255) tCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGaa < 4:114343/148‑1 (MQ=255) tCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAg > 5:353507/1‑149 (MQ=255) gCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGt > 7:251164/1‑148 (MQ=255) gCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTa > 8:24812/1‑149 (MQ=255) cATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTac < 7:29930/149‑1 (MQ=255) cTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTacaac < 4:352366/148‑1 (MQ=255) gACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAgg > 5:166589/1‑149 (MQ=255) gACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAgg > 1:209136/1‑149 (MQ=255) gACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAATGAAGGAAATCGAGAGCCAGTACGCCCC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAgg > 4:208520/1‑149 (MQ=255) gACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTAATACCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGAAAGTACGCATC‑C‑GGCCTTGTAACCCAGGGCGAGAAGTACAACAAgg > 7:178324/1‑149 (MQ=255) aCCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAgg > 7:44877/1‑148 (MQ=255) cATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCa > 5:202203/1‑149 (MQ=255) tttCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATc < 5:349014/149‑1 (MQ=255) tttCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATc < 6:353507/149‑1 (MQ=255) cGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACt < 6:166589/149‑1 (MQ=255) tCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGt < 5:213661/148‑1 (MQ=255) tCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAATGAAGGAAATCGAGAGCCAGTACGCCCC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAg < 3:208520/149‑1 (MQ=255) ttAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAac < 8:295988/149‑1 (MQ=255) aaCGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAacga > 8:42746/1‑149 (MQ=255) aCTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCTATGAAGTGAAGTAAATCGAGAGCCATTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGaa < 8:178324/149‑1 (MQ=255) aCTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGaa < 8:244343/149‑1 (MQ=255) ttCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAgt > 6:361124/1‑149 (MQ=255) ttCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAgt > 5:1486/1‑149 (MQ=255) ttATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTcc < 2:296784/149‑1 (MQ=255) ccGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGc > 4:73286/1‑149 (MQ=255) cGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAATTGAAGGAAATCGAGAGCCAGTACGCCTC‑A‑GGCCTGGTAACCCAGGGCGAGAAGTAGAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGc > 8:319024/1‑148 (MQ=255) gACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCAAAGGCgat > 2:301115/1‑149 (MQ=255) gagaAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCgatgat > 6:157589/1‑149 (MQ=255) agaAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTtgt > 7:37662/1‑111 (MQ=255) agaAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTtgt < 8:37662/111‑1 (MQ=255) agaAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCGatgatg > 3:306486/1‑149 (MQ=255) gaAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCGATGATgg < 7:24812/149‑1 (MQ=255) aaGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCGATGATGGc < 7:93373/148‑1 (MQ=255) cGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCGATGATGGCCAAcc > 5:12301/1‑148 (MQ=255) acttcatcGGTAGCGTTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCGATGATGGCCAACctc > 8:316478/4‑149 (MQ=255) ttcatcGGTAGCGTTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCGATGATGGCCAACCtctc > 7:38339/2‑149 (MQ=255) tcGGTAGCGTTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCGATGATGGCCAACCTCTCGaaa < 7:316478/149‑1 (MQ=255) tcGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCGATGAGGGCCAACCTCTCGaaa < 2:16493/149‑1 (MQ=255) gTAACGCTACCTATGAATTGAAGGAAATAGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCGATGATGGCCAACCTCTCGAAagag < 7:118002/149‑1 (MQ=255) gTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCTC‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCGATGATGGCCAACCTCTCGaaa > 1:270499/1‑147 (MQ=255) aCGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCGATGATGGCCAACCTCTCGAAAGAGaa < 8:251164/148‑1 (MQ=255) gCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑CGGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTc > 1:76200/1‑114 (MQ=255) gCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTc < 2:76200/113‑1 (MQ=255) | TACCGCGTGGTTGGTCTGAAAGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTC‑C‑GGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCGATGATGGCCAACCTCTCGAAAGAGAA > NC_002947/543585‑543874 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |