Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 558,478 | C→T | 5.9% | L22F (CTC→TTC) | rplR → | 50S ribosomal protein L18 |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 558,478 | 0 | C | T | 5.9% | 201.6 / 2.3 | 67 | L22F (CTC→TTC) | rplR | 50S ribosomal protein L18 |
Reads supporting (aligned to +/- strand): ref base C (28/35); new base T (2/2); total (30/37) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.95e-01 |
CCAGAGCCTTACAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCAACATCGACGC > NC_002947/558330‑558620 | ccAGAGCCTTACAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTCCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAAc > 8:340634/1‑149 (MQ=255) gCCTTACAAAGGTAAAGGTGTGCGTTACGGGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCTAATCACGTCTCAAGATGCACGAACTCGaa < 7:340634/149‑1 (MQ=255) gCCTTACAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGaa < 2:55153/149‑1 (MQ=255) aCAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCGCAAGATGCACGAACTCGAAGTCGt > 8:97702/1‑149 (MQ=255) aaaggtaaaggtGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTgc > 8:309303/1‑149 (MQ=255) gtaaaggtGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGACTTCGAGTTCGTgcatct > 5:94311/1‑145 (MQ=255) taaaggtGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGACTTCGAGTTCGTgcatctt < 6:94311/149‑6 (MQ=255) aaaggtGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCtgt > 6:101426/1‑149 (MQ=255) gtgtGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCgt > 5:218096/1‑149 (MQ=255) cGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTc < 5:103166/148‑1 (MQ=255) ttACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGc > 8:75836/1‑149 (MQ=255) cgcgGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGctc < 5:50781/148‑1 (MQ=255) gcgGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGCCTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACGCGAAGTCGTTCGCCTGTGCGTGGTcccag > 6:259883/1‑143 (MQ=255) gcgGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGctcct < 4:16089/149‑1 (MQ=255) gACGAAGTAGTCCGTCGTAAAGAAGCGAAGAAGAAGTAGTGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCgc < 3:352525/149‑1 (MQ=255) gAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCgcag > 3:153870/1‑148 (MQ=255) agtagtCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGcac < 5:101426/149‑1 (MQ=255) agtCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACAt < 1:271563/148‑1 (MQ=255) gtCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCt < 3:327052/149‑1 (MQ=255) cgtcgtAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTAc < 6:379831/148‑1 (MQ=255) tAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTACCGCTCCTCGCAGCACATCTACGCCCAg < 1:208933/149‑1 (MQ=255) agCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCAt < 4:59766/148‑1 (MQ=255) gCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCAttt < 2:347993/149‑1 (MQ=255) gCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCAtt > 1:347993/1‑148 (MQ=255) ccAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTc > 3:220096/1‑149 (MQ=255) ccAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAG‑TATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCg > 2:318289/1‑149 (MQ=255) aagaagaagTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCgg > 1:277552/1‑149 (MQ=255) aagaagaagTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCgg > 5:202908/1‑149 (MQ=255) aagaagaagTAGGGCCTAGTAAATGACCCACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCgg > 1:208486/1‑149 (MQ=255) agaagaagTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGc < 5:259883/149‑1 (MQ=255) agaagaagTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGc < 7:75836/149‑1 (MQ=255) gTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTgc > 6:306078/1‑90 (MQ=255) gTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTgc < 5:306078/90‑1 (MQ=255) gTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGgc < 7:309303/149‑1 (MQ=255) tAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGCGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGgca < 5:99511/149‑1 (MQ=255) ggCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTAGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGgcagc > 5:16221/1‑148 (MQ=255) gCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGgcagc > 2:359536/1‑147 (MQ=255) ccTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAg > 3:183249/1‑149 (MQ=255) gTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGtt < 6:99289/148‑1 (MQ=255) gTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTc > 7:304183/1‑149 (MQ=255) aaTGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTg < 4:8631/148‑1 (MQ=255) aCCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCaa < 1:149666/148‑1 (MQ=255) cGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAgcg > 7:46100/1‑149 (MQ=255) aaaaGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGCTCTGGCATGCGCCTCGa > 1:157383/1‑149 (MQ=255) aaaGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTGCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGAc < 6:357496/149‑1 (MQ=255) aGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCGTCGACCt > 5:300918/1‑149 (MQ=255) ttATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTg < 4:183249/149‑1 (MQ=255) ttATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTAGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTg < 6:16221/149‑1 (MQ=255) ttCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGAc < 1:318289/149‑1 (MQ=255) tCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGc < 6:218096/149‑1 (MQ=255) cgcTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTg < 4:220096/149‑1 (MQ=255) gcTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGa < 4:153870/149‑1 (MQ=255) cTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCAGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGAt > 5:158812/1‑149 (MQ=255) tCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGtcgat > 4:370491/1‑145 (MQ=255) gCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATg < 8:46100/147‑1 (MQ=255) gCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGgc < 6:202908/149‑1 (MQ=255) gCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGgc < 2:277552/149‑1 (MQ=255) aaaGCACGTCTCAAGATGCACGAACTCGAAGTCGTGAGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGgcgc > 6:180533/1‑149 (MQ=255) aaGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATgttgc > 3:351066/1‑144 (MQ=255) gCACGTATCAAGATGCACGAACTCGAAGTCGTGCGCCTCTGCGTGTTACGCTCCTCGCAGCACATCTACGCACAGGTCATTTCGGAAGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACATTGGACAAAGACCTGCGTGATGGCGCCAc > 2:102609/1‑149 (MQ=255) gcgCACGACTTCGAGTTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGAc > 1:167554/3‑120 (MQ=255) gcgCACGACTTCGAGTTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGAc < 2:167554/118‑1 (MQ=255) tGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCAACATCGAc < 2:208486/149‑1 (MQ=255) gCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCAACATCGAcg > 7:42808/1‑149 (MQ=255) cACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGTTGCCAGTGGCGCCATcacgc < 4:351066/148‑5 (MQ=255) cACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCAACATCGAcgc > 6:106275/1‑149 (MQ=255) cACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCAACATCGAcg < 7:97702/148‑1 (MQ=255) cACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGGCATTTCGGCCGACGGCAGCAAGGCTCTGGCATGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCAACATCGAcgc < 2:157383/149‑1 (MQ=255) | CCAGAGCCTTACAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCAACATCGACGC > NC_002947/558330‑558620 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |