| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 650,846 | T→A | 8.3% | intergenic (‑135/+45) | aroQ‑I ← / ← dsbD‑I | type II 3‑dehydroquinate dehydratase/thiol/disulfide interchange protein 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 650,846 | 0 | T | A | 8.3% | 243.7 / 10.1 | 84 | intergenic (‑135/+45) | aroQ‑I/dsbD‑I | type II 3‑dehydroquinate dehydratase/thiol/disulfide interchange protein 1 |
| Reads supporting (aligned to +/- strand): ref base T (42/35); new base A (4/3); total (46/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.35e-01 | |||||||||||
TTGCCATCTGCGGATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGCTGCCGTTCG > NC_002947/650705‑650991 | ttGCCATCTGCGGATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCg > 3:337313/1‑149 (MQ=255)ttGCCATCTGCGGATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCg > 6:242807/1‑149 (MQ=255) ccATCTGCGGATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATTTAAATATCCGGt < 6:148865/148‑1 (MQ=255) cATCTGCGGATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCa > 5:185254/1‑149 (MQ=255) aTCTGCGGATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCAc > 7:140409/1‑149 (MQ=255) tGCGGATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑Ca > 6:56513/1‑149 (MQ=255) cGGATTCCTTGGATTTGTAGGGCATTTCGACACAGCGCGGCGAGTGTGCCGTAAAGCATCGGCAAGTGTCCAGTTCCCTGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATTTAAATATCCGGTCAcata < 6:50735/147‑4 (MQ=255) aTTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCa < 4:355270/149‑1 (MQ=255) ttCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCa < 8:140409/148‑1 (MQ=255) cTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCACGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGa < 8:308113/148‑1 (MQ=255) cTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGAt < 5:56513/149‑1 (MQ=255) cTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGAt > 3:174459/1‑149 (MQ=255) ttGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCa < 6:289928/135‑1 (MQ=255) ttGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCa > 5:289928/1‑135 (MQ=255) ttGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGAtt > 4:289803/1‑149 (MQ=255) gATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGAttttt < 4:337313/149‑1 (MQ=255) gTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGa < 5:287963/148‑1 (MQ=255) ggCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTcg > 6:301035/1‑149 (MQ=255) aaTTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCgg > 5:31462/1‑149 (MQ=255) acacAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCGGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGtt > 1:259391/1‑149 (MQ=255) acaGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTtat < 7:260389/149‑1 (MQ=255) caGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTtat < 1:238783/149‑1 (MQ=255) ggcgAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGa < 6:31462/149‑1 (MQ=255) tgCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGcc < 4:32211/148‑1 (MQ=255) ccGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCcgcg < 5:301035/149‑1 (MQ=255) cGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCcgcg > 1:165726/1‑148 (MQ=255) cGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCcgcg > 1:171235/1‑148 (MQ=255) tAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCTAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCAc > 2:166173/1‑149 (MQ=255) tAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCAc > 1:151908/1‑149 (MQ=255) tAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACAGACTTTGCCGCGCAc > 6:96764/1‑149 (MQ=255) aaaGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCAcg > 3:115162/1‑149 (MQ=255) gCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCAcgcgc < 1:245453/149‑1 (MQ=255) aaCGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGt < 6:185254/149‑1 (MQ=255) cGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTc < 7:353724/148‑1 (MQ=255) cGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCa < 1:179667/149‑1 (MQ=255) gCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCTGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTta > 6:254765/1‑118 (MQ=255) gCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCTGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTta < 5:254765/118‑1 (MQ=255) cAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGaa < 4:115162/149‑1 (MQ=255) ccAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCt < 7:122532/145‑1 (MQ=255) ccAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCt > 8:122532/1‑145 (MQ=255) cAGTTCCCGGCAATAGCTAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTgcgc < 1:166173/148‑1 (MQ=255) cAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTgcgc > 8:251597/1‑148 (MQ=255) aGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGcgcg > 7:23063/1‑148 (MQ=255) aGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGcgcg > 2:192148/1‑148 (MQ=255) ttCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAAt > 5:105987/1‑149 (MQ=255) ccGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCt < 5:149413/91‑1 (MQ=255) ccGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCt > 6:149413/1‑91 (MQ=255) ccGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATAGTTAAATCCGGTCCCT‑CAGTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCCCGCGCGTCAGAATCTGCGCGAATTCa > 1:202340/1‑149 (MQ=255) tAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCAt > 8:209510/1‑149 (MQ=255) tAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCAt > 7:347135/1‑149 (MQ=255) ccAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTa > 8:323392/1‑149 (MQ=255) ccAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTa > 6:254001/1‑149 (MQ=255) cAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAg > 4:12965/1‑122 (MQ=255) cAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAg < 3:12965/122‑1 (MQ=255) aGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTAtc > 7:354711/1‑149 (MQ=255) aCGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCg < 7:251597/149‑1 (MQ=255) tCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATc < 3:289803/149‑1 (MQ=255) ccGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGaa > 3:228970/1‑77 (MQ=255) ccGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGaa < 4:228970/77‑1 (MQ=255) cGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGACAATCAc > 2:323931/1‑149 (MQ=255) gAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAAt < 7:269086/122‑1 (MQ=255) gAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAAt > 8:269086/1‑122 (MQ=255) tCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGAt > 2:330127/1‑148 (MQ=255) gcgcgAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAg > 1:331302/1‑149 (MQ=255) gcgAAGGATGTGACCGGATATTTCACTCCGGTCACT‑CATTGCCGGAGTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCCCCGGCATTTATCTCGCCACTCACCCGCTCAGCg < 2:202340/149‑1 (MQ=255) cgAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCgg < 8:354711/149‑1 (MQ=255) aaGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTa < 2:331302/149‑1 (MQ=255) aGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTaa < 5:242807/149‑1 (MQ=255) gTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAAt < 4:97700/149‑1 (MQ=255) atgagtgACCGGATTTAAATATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAAt > 8:278684/5‑149 (MQ=255) tATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAAtt > 6:354446/1‑149 (MQ=255) tgtgACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTc < 4:174459/149‑1 (MQ=255) gtgACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCg > 6:17755/1‑149 (MQ=255) tgACCGGATTTAAATATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGc > 2:231659/1‑149 (MQ=255) gACCGGATTTAAATATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGCt > 4:63590/1‑149 (MQ=255) aCCGGATTTAAATATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTAtct > 5:32559/1‑117 (MQ=255) aCCGGATTTAAATATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTAtct < 6:32559/117‑1 (MQ=255) aCCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGAGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGTCATTTATCTCGCCAATCAACCTATCAGCGGTAttttggat < 8:248433/148‑5 (MQ=255) ccGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGCTGc < 7:209510/149‑1 (MQ=255) ggATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGCTGCCg > 1:78257/1‑149 (MQ=255) ggATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCA‑TTATGTAGCCAATCACCCGATGAGCCGTAATTTAGCTGCCGt > 7:114950/1‑149 (MQ=255) gATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGCTGCCGt > 1:52431/1‑149 (MQ=255) atatTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGCTGCCGtt > 8:302665/1‑149 (MQ=255) tatTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGCTGCCGTTc < 7:302665/149‑1 (MQ=255) ttAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGCTGCCGTTCg > 2:277353/1‑147 (MQ=255) | TTGCCATCTGCGGATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACT‑CATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGCTGCCGTTCG > NC_002947/650705‑650991 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |