| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 658,249 | T→A | 6.7% | intergenic (+56/‑184) | PP_0565 → / → yciH | Nudix hydrolase/translation‑related factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 658,249 | 0 | T | A | 6.7% | 296.4 / 7.5 | 99 | intergenic (+56/‑184) | PP_0565/yciH | Nudix hydrolase/translation‑related factor |
| Reads supporting (aligned to +/- strand): ref base T (51/41); new base A (5/2); total (56/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.86e-01 | |||||||||||
Only 100 of 101 total aligned reads displayed.
ATCGGTCTGGAACAGGCTGAGCAGGAAAGCCTGAGCAAGCCTTATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTGGGGCTTCGCGGTCGGCCTCAACCCCAAGGC > NC_002947/658101‑658396 | aTCGGTCTGGAACAGGCTGAGCAGGAAAGCCTGAGCAAGCCTTATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCt < 4:106945/149‑1 (MQ=255) tCGGTCTGGAACAGGCTGAGCAGGAAAGCCTGAGCAAGCCTTATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCtt > 3:3846/1‑149 (MQ=255) ggTCTGGAACAGGCTGAGCAGGAAAGCCTGAGCAAGCCTTATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTg < 1:113657/149‑1 (MQ=255) gTCTGGAACAGGCTGAGCAGGAAAGCCTGAGCAAGCCTTATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGc > 3:86298/1‑149 (MQ=255) ctCTGGAACAGGCTGAGCAGGAAAGCCTGAGCAAGCCTAATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGc > 8:113206/2‑149 (MQ=255) tCTGGAACAGGCTGAGCAGGAAAGCCTGAGCAAGCCTTATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGTCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGcc < 6:276711/149‑1 (MQ=255) gtaCAGGCTTAGCATGAAATCCTGAGCAAGACTTATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCtt < 8:296423/146‑1 (MQ=255) gAACAGGCTGAGCAGGAAAGCCTGAGCAAGCCTTATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGccc < 7:113206/146‑1 (MQ=255) aCAGGCTGAGCAGGAAAGCCTGAGCAAGCCTTATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGGTTCCCAGGGCAAGGGCTTTGCCCTTGtt > 2:312291/1‑149 (MQ=255) ggCTGAGCAGGAAAGCCTGAGCAAGCCTTATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTcgc < 1:209912/149‑1 (MQ=255) gCTGAGCAGGAAAGCCTGAGCAAGCCTTATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTcgcg > 5:282333/1‑149 (MQ=255) gCTGAGCAGGAAAGCCTGAGCAAGCCTTATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTcgcg < 3:191675/149‑1 (MQ=255) cTGAGCAGGAAAGCCTGAGCAAGCCTTATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCgg < 1:4266/149‑1 (MQ=255) aGCAGGAAAGCCTGAGCAAGCCTTATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGt > 3:22852/1‑148 (MQ=255) aGGAAAGCCTGAGCAAGCCTTATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCgg < 7:55033/143‑1 (MQ=255) gAAAGCCTGAGCAAGCCTTATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATcc < 6:246990/149‑1 (MQ=255) gAAAGCCTGAGCAAGCCTTATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATcc > 5:360650/1‑149 (MQ=255) gAAAGCCTGAGCAAGCCTTATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATcc > 5:114876/1‑149 (MQ=255) gCCTGAGCAAGCCTTATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCTGCCCAGACACCCTTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCtt < 6:234497/149‑1 (MQ=255) gCCTGAGCAAGCCTTATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCtt < 4:103329/149‑1 (MQ=255) gCCTGAGCAAGCCTTATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCtt < 7:13690/149‑1 (MQ=255) tGAGCAAGCCTTATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCACAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGAGGGTAAATCCGCTTCTa > 2:163297/1‑149 (MQ=255) aaGCCTTATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTGCGCGGGTAAATCCGCTTCTACACaa < 1:250757/149‑1 (MQ=255) tATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCg > 4:153004/1‑149 (MQ=255) ttGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTa > 1:220857/1‑149 (MQ=255) ccGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTacac < 5:313783/135‑1 (MQ=255) ccGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTacac > 6:313783/1‑135 (MQ=255) ccGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGACCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTa < 3:320121/149‑1 (MQ=255) cGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTAt < 6:114876/149‑1 (MQ=255) gACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCg > 3:110300/1‑149 (MQ=255) tCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTa > 2:239132/1‑149 (MQ=255) gTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTac > 6:77364/1‑148 (MQ=255) ggcgTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTgcgc > 3:190628/1‑149 (MQ=255) gcgTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTgcgcg > 5:1595/1‑149 (MQ=255) cgTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCg > 1:234867/1‑136 (MQ=255) cgTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCg < 2:234867/136‑1 (MQ=255) gTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGcc > 2:217981/1‑149 (MQ=255) cgcTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCg > 5:275554/1‑149 (MQ=255) gcTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCgg < 4:3846/149‑1 (MQ=255) tACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGc > 4:87918/1‑149 (MQ=255) tACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGc > 4:370236/1‑149 (MQ=255) aaGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGc < 6:275554/149‑1 (MQ=255) ggCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTAtt < 6:37767/115‑1 (MQ=255) ggCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTAtt > 5:37767/1‑115 (MQ=255) cACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCaa > 2:185358/1‑149 (MQ=255) cACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCaa > 1:90462/1‑149 (MQ=255) cACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCaa > 3:66958/1‑149 (MQ=255) aCTTTGTAGGCTCGGGTTTGCCGGCGAAATACCGGCCCAGACACCAGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGAGGGTAAATCCGCTTCAACACAACCGGCGTATTTATCGTAACACTCCGAGACGTTTACGGGCTGCCGCAAt > 7:236597/1‑149 (MQ=255) cTTTGTAGGCTCGGTTTTGCCCGCGAAATACCGGCCCAGACACCCGTATCCCAGTGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAAtt < 4:236917/149‑1 (MQ=255) tttGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTc > 3:241632/1‑149 (MQ=255) tGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCt < 7:47009/148‑1 (MQ=255) tAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTg < 6:282333/148‑1 (MQ=255) tAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTg < 6:360650/148‑1 (MQ=255) tAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTg > 1:256610/1‑148 (MQ=255) ggCTCGGGTGTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTgca < 6:60628/148‑1 (MQ=255) gCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTgcag > 7:52477/1‑148 (MQ=255) tCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGcagcag > 2:121558/1‑149 (MQ=255) gTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCACAGGGCAAGTGCTTTGCCCTTGTTCGCGGTAAAATCCGCTTCTAAACAACCGGCGTATTTATCGTTACACAGCGCGCCCTTTTCGGTCTGCCGCAATTCTTGcagcagactc > 2:202397/1‑145 (MQ=255) gCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGcc > 8:118072/1‑125 (MQ=255) gCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGcc < 7:118072/125‑1 (MQ=255) ccGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCg < 1:275144/124‑1 (MQ=255) ccGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCg > 2:275144/1‑124 (MQ=255) ccGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCgccgcc < 4:22852/149‑1 (MQ=255) cgcgAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGccc > 2:258055/1‑149 (MQ=255) gcgAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGcccc > 6:183077/1‑149 (MQ=255) aaaTACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGc < 4:110300/149‑1 (MQ=255) aTACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCa < 3:87918/149‑1 (MQ=255) aTACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCa < 2:220857/149‑1 (MQ=255) tACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGc > 7:177261/1‑146 (MQ=255) ccGGCCCAGACACCCGTTTCCCAGGTCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCagag < 4:241632/149‑1 (MQ=255) ccGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCagag > 3:198236/1‑149 (MQ=255) ggCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTg < 8:52477/149‑1 (MQ=255) ggCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCGACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAAGTCTTGCAGCAGTCGCGCCGCCCCTGCCAGCGTg > 8:240240/1‑149 (MQ=255) gCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTgg < 1:185358/149‑1 (MQ=255) ccAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTgggg > 2:77456/1‑149 (MQ=255) ccAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTgggg < 4:86298/149‑1 (MQ=255) cAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTGGGGc > 3:111840/1‑149 (MQ=255) acCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTggg > 1:362922/1‑142 (MQ=255) acCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTggg < 2:362922/142‑1 (MQ=255) cccGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTGGGGCTTcgcg < 3:370236/149‑1 (MQ=255) ccGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTGGGGCTTCGCgg > 2:375078/1‑149 (MQ=255) ccGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTAGTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTTGGGCTTCTCgg > 3:223086/1‑149 (MQ=255) ccAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTGGGGCTTCGCGGTCGGCCt > 2:172515/1‑149 (MQ=255) ccAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTGGGGCTTCGCGGTCGGCCt > 8:251564/1‑149 (MQ=255) gcgaacAAGGGCAAAGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTGGGGCTTCGCGGTCGGCCt > 4:31073/6‑148 (MQ=255) gcgaacAAGGGCAAAGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTGGGGCTTCGCGGTCGGCCTc > 6:93658/6‑149 (MQ=255) gggCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTGGGGCTTCGCGGTCGGCCTCaa < 1:258055/149‑1 (MQ=255) gaacAAGGGCAAAGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATc < 6:226863/58‑1 (MQ=37) gaacAAGGGCAAAGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATc > 5:226863/4‑61 (MQ=37) gaacAAGGGCAAAGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTGGGGCTTCGCGGTCGGCCTc < 6:341066/144‑1 (MQ=255) gaacAAGGGCAAAGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTGGGGCTTCGCGGTCGGCCTc > 5:341066/4‑147 (MQ=255) gaacAAGGGCAAAGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCAGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTGGGGCTTCGCGGTCGGCCTCaa > 6:77645/4‑149 (MQ=255) gCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTGGGGCTTCGCGGTCGGCCTCAAcc > 5:74984/1‑149 (MQ=255) cAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTGGGGCTTCGCGGTCGGCCTCAAccc > 8:296595/1‑149 (MQ=255) gggCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTGGGGCTTCGCGGTCGGCCTCAACCCCaa < 2:90462/149‑1 (MQ=255) gggCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACAGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTGGGGCTTCGCGGTCGGCCTCAAcccc > 1:71599/1‑147 (MQ=255) ggCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTGGGGCTTCGCGGTCGGCCTCAACCCCAAg < 1:217981/149‑1 (MQ=255) cTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTGGGGCTTCGCGGTCGGCCTCAACCCCAAgg > 7:133112/1‑148 (MQ=255) cTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTGGGGCTTCGCGGTCGGCCTCAACCCCAAgg > 5:364673/1‑148 (MQ=255) cTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTGGGGCTTCGCGGTCGGCCTCAACCCCAAGGc < 5:77364/149‑1 (MQ=255) | ATCGGTCTGGAACAGGCTGAGCAGGAAAGCCTGAGCAAGCCTTATTGCCCGGACTCGTTGGCGGCGTTGCAGCGCTACAAGGCCACTTTGTAGGCTCGGGTTTGCCCGCGAAATACCGGCCCAGACACCCGTTTCCCAGGGCAAGGGCTTTGCCCTTGTTCGCGGGTAAATCCGCTTCTACACAACCGGCGTATTTATCGTTACACTGCGCGCCCTTTTCGGGCTGCCGCAATTCTTGCAGCAGTAGCGCCGCCCCTGCCAGAGTGGGGCTTCGCGGTCGGCCTCAACCCCAAGGC > NC_002947/658101‑658396 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |