| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 812,329 | A→G | 7.1% | intergenic (‑78/‑150) | PP_0698 ← / → PP_0699 | LysR family transcriptional regulator/LysE family transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 812,329 | 0 | A | G | 7.1% | 209.5 / 4.6 | 71 | intergenic (‑78/‑150) | PP_0698/PP_0699 | LysR family transcriptional regulator/LysE family transporter |
| Reads supporting (aligned to +/- strand): ref base A (33/32); new base G (2/3); total (36/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.29e-01 | |||||||||||
CGCGCACGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATCGGCGGTCTGTGCATTTCCATCGCCTATCGAGAGCCCT > NC_002947/812182‑812474 | cgcgcACGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAg < 4:275356/149‑1 (MQ=255) ctcACGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCTGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGt < 3:277648/147‑1 (MQ=255) gcACGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGtt > 4:151799/1‑149 (MQ=255) cACGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCGGGta > 1:196886/1‑147 (MQ=255) cACGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGttt < 4:77871/149‑1 (MQ=255) cGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTAc < 8:45370/149‑1 (MQ=255) aaGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCTTTGAGTGGCGGCAGTTTCATGATATCCCTGTTCCGCGGTGCCGGCCGCTTCGCGGGTAAACCTGCCCCTACATGGAAATATGTGGCCATGTAGGAGCGGGTTTAccc < 1:244624/149‑1 (MQ=18) aaGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCTGCCCCTACAGGGAAATATGTGGCCATGTAGGAGCGGGTTTAccc < 7:179818/149‑1 (MQ=21) aGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCTGCCCCTACAGGGAAATATGTGGCCATGTAGGAGCGGGTTTACCcg < 3:140038/149‑1 (MQ=21) ggTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAag < 2:199269/147‑1 (MQ=255) ggcggcAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGcc < 6:305510/146‑1 (MQ=255) ggcggcAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCGGCGACATGGCCACATATTTCCCTGGAGGGGGAGGTTTAGCCGCGAAGAGGCCAag > 8:129131/1‑149 (MQ=255) gcggcAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAagg < 5:216844/149‑1 (MQ=255) gcggcAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAagg < 3:245207/149‑1 (MQ=255) cAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGc < 7:277291/140‑1 (MQ=255) cAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGc > 8:277291/1‑140 (MQ=255) tCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGt < 2:37279/148‑1 (MQ=255) aaGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACa > 4:296925/1‑148 (MQ=255) cGGAAGGCGTTGAGTGGCGGCAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCtgt < 7:129131/149‑1 (MQ=255) gAAGGCGTTGAGTGGCGGCAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCtgt > 3:247852/1‑147 (MQ=255) gCGTTGAGTGGCGGCAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTAGCCGCGaa > 2:283832/1‑115 (MQ=255) gCGTTGAGTGGCGGCAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGa > 8:81416/1‑145 (MQ=255) gCGTTGAGTGGCGGCAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGa < 7:81416/145‑1 (MQ=255) gTTGAGTGGCGGCAGTTTCATGATATCCCTGTTAAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGACGCCAAGGCAGGCTGTACATATATGTGAGCaat > 7:348004/1‑147 (MQ=255) tGGCGGCAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTAt > 1:52379/1‑147 (MQ=255) cggcAGTTTCATGATATCCCTGTTCAGCTGTGCCTGCCTCTTCGGGGGTAAACCCGCTCCTACATGGCCACTTATTTCCCTGTAGGGGCAGGTTTACCGGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGAt < 7:326606/149‑1 (MQ=255) ggcAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCCCATATTTCCCGGTAGGGGCCGGTTTACACGCGAAGATGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGAtt > 7:135919/1‑149 (MQ=39) gTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGTCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCAtc < 4:247852/149‑1 (MQ=255) gATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGAtt < 3:290501/138‑1 (MQ=255) gATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGAtt > 4:290501/1‑138 (MQ=255) gATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCa > 5:174699/1‑148 (MQ=255) atatCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCAGTAGGGGCAGGGTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGAATAATCTCACCAt > 4:44852/1‑148 (MQ=39) tCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTAAGCATAAAt > 2:290943/1‑149 (MQ=255) cccTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATc > 3:275307/1‑149 (MQ=255) ccTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCAGAAATc > 6:376979/1‑148 (MQ=255) cTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAAATTCATCTCAGCATAAATCGa > 7:97421/1‑149 (MQ=255) cTGTGCCGCCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGAGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTcc > 1:313045/1‑148 (MQ=255) cTGTCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCg > 6:339248/1‑149 (MQ=255) ccGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATc < 7:59537/148‑1 (MQ=255) ccGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCt < 3:44852/149‑1 (MQ=255) ccGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCt < 3:151799/149‑1 (MQ=255) cGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACGATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTg > 1:147336/1‑149 (MQ=255) tctTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAgc > 7:45635/1‑149 (MQ=255) tctTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAgc > 8:249628/1‑149 (MQ=255) cgcgGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCtt > 4:247668/1‑149 (MQ=255) gcgGGTAAACCTGCCCCTACAGGGAAATATGTGGCCATGTAGGAGCGGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCTTCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCtt > 6:184806/1‑148 (MQ=18) gggTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGAt < 7:249628/149‑1 (MQ=255) gggTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTCTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGa > 1:131755/1‑148 (MQ=255) ggTAAACACGCTCCTACATGGCCACATATTTCCATGTAGCGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCTAAACTATCAGATTCATCACAGCATAAATCGATTTATCCGCATATGGAAGCGCTTAAt > 6:164944/1‑148 (MQ=255) aCCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATcgg < 2:52379/149‑1 (MQ=255) cccGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATcggc > 4:360240/1‑149 (MQ=255) ccGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATcggcg > 6:263600/1‑149 (MQ=255) ccTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATCGGCGGTCtg > 1:301172/1‑149 (MQ=255) cTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATCGGCGGTCtgt < 4:275307/149‑1 (MQ=255) cTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATCGGCGGTCt < 5:339248/147‑1 (MQ=255) cTACATCGCCACTTATTTCCCTTTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTTAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATCGGCGGTCt < 8:348004/147‑1 (MQ=255) gCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATCGGCGGTCTGTGCAttt < 5:263600/148‑1 (MQ=255) ccACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATCGGCGGTCTGTGc > 1:201670/1‑143 (MQ=255) ccACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATCGGCGGTCTGTGc < 2:201670/143‑1 (MQ=255) ccACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATCGGCGGTCTGTGCATTTcc < 1:310402/149‑1 (MQ=255) cacaTATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATCGGCGGTCTGTGCATTTCCa < 3:247668/149‑1 (MQ=255) acaTATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATCGGCGGTCTGTGCATTTCCAt > 2:318382/1‑149 (MQ=255) caTTTTGCCCTGTCGGGGCAGGTTAACCCGCTAAGAGGCCAAGGCAGGCTGTAAATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATCGGCGGTCTGTGCATTTCCATc < 8:135919/149‑1 (MQ=255) tttCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATCGGCGGTCTGTGCATTTCCATCGcc > 5:305499/1‑148 (MQ=255) ttCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATCGGCGGTCTGTGCATTTCCATCGCCTa > 6:167276/1‑149 (MQ=255) tGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATCGGCGGTCTGTGCATTTCCATc > 5:193589/1‑139 (MQ=255) tGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATCGGCGGTCTGTGCATTTCCATc < 6:193589/139‑1 (MQ=255) aGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATcggcg < 2:109513/119‑1 (MQ=255) aGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATcggcg > 1:109513/1‑119 (MQ=255) ggggCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATCGGCGGTCTGTGCATTTCCATCGCCTATCGAGAGcc < 3:296925/149‑1 (MQ=255) ggCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATCGGCGGTCTGTGCATTTCCATCGCCTATCGAGAGCCCt < 2:313045/149‑1 (MQ=255) | CGCGCACGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATATCCCTGTTCAGCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATCGGCGGTCTGTGCATTTCCATCGCCTATCGAGAGCCCT > NC_002947/812182‑812474 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |