BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	876,018	G→C	7.1%	noncoding (102/142 nt)	PP_mr65 ←	YybP‑YkoY

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	876,018	0	G	C	7.1%	298.2 / 11.0	99	noncoding (102/142 nt)	PP_mr65	YybP‑YkoY
Reads supporting (aligned to +/- strand): ref base G (50/42); new base C (3/4); total (53/46)
Fisher's exact test for biased strand distribution p-value = 7.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.52e-01

GACCAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAGCGCTGTTTTTT  >  NC_002947/875871‑876161

gACCAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCTGGTCGACACGGCTAGGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGt                                                                                                                                                <  4:300343/149‑1 (MQ=255)

gACCAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGGAGGCGt                                                                                                                                                <  6:56518/149‑1 (MQ=255)

gACCAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGt                                                                                                                                                <  2:282288/149‑1 (MQ=255)

   cAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCATCTATGCGGATCTCTCCATGCAGGCGTGCa                                                                                                                                             >  4:348211/1‑149 (MQ=255)

      cAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCACGCCTGCAtgg                                                                                                                                          <  4:246024/149‑1 (MQ=255)

       aGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCACGCCTGCAtgga                                                                                                                                         <  5:171371/149‑2 (MQ=255)

       aGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCACGCCTGCAtgga                                                                                                                                         <  8:255242/149‑2 (MQ=255)

         tGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCAtggtgg                                                                                                                                       >  3:193981/1‑149 (MQ=255)

            ttCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTc                                                                                                                                    >  3:156957/1‑149 (MQ=255)

                  cATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCAcgc                                                                                                                              <  4:193626/149‑1 (MQ=255)

                        gATTCCTACGGGGGCGGGGCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATg                                                                                                                        <  3:139177/149‑1 (MQ=255)

                              tACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCtgt                                                                                                                  >  4:206573/1‑149 (MQ=255)

                                         gTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTAt                                                                                                       >  7:301474/1‑149 (MQ=255)

                                            gACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCATCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGtt                                                                                                    <  3:348211/149‑1 (MQ=255)

                                             acacGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTATTGTAAAACCCACGATCCGTCTATGCGGATCTATACATGCCGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGAACAAGTATGtt                                                                                                    >  7:235615/1‑148 (MQ=255)

                                              cacGTCTCTGACACGTACATCCTCCCCGCCCCGGGGAAGGTGTGCGTTTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGTTCGCACGCGACATGGTCTGTGGACCAAGTATGTTGa                                                                                                  <  4:227438/149‑1 (MQ=255)

                                              cacGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGa                                                                                                  <  8:301474/149‑1 (MQ=255)

                                              cacGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGa                                                                                                  <  6:34736/149‑1 (MQ=255)

                                              cacGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCACGGTCTGTGGACCaa                                                                                                           >  1:327773/1‑140 (MQ=255)

                                              cacGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCACGGTCTGTGGACCaa                                                                                                           <  2:327773/140‑1 (MQ=255)

                                                 ggCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTAt                                                                                                       >  3:24813/1‑141 (MQ=255)

                                                 ggCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTAt                                                                                                       <  4:24813/141‑1 (MQ=255)

                                                 ggCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGAcgc                                                                                               >  7:153800/1‑149 (MQ=255)

                                                   cTATGACACGCACACCTTACCCGGGGCGGGGAGGCTGTACGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGcc                                                                                                                           <  4:319512/119‑1 (MQ=21)

                                                   cTATGACACGCACACCTTACCCGGGGCGGGGAGGCTGTACGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGcc                                                                                                                           >  3:319512/1‑119 (MQ=21)

                                                        acacGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAGGTATGTTGACGCGTACCg                                                                                         >  1:76940/1‑149 (MQ=255)

                                                        acacGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCgg                                                                                        >  2:245999/1‑149 (MQ=255)

                                                            gTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGc                                                                                      >  5:269664/1‑147 (MQ=255)

                                                             tACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAg                                                                                   >  2:341264/1‑149 (MQ=255)

                                                              aCAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGc                                                                                  >  5:336577/1‑149 (MQ=255)

                                                               cAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGt                                                                                                                      <  2:93096/112‑1 (MQ=255)

                                                               cAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCt                                                                                 >  6:243368/1‑149 (MQ=255)

                                                               cAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCt                                                                                 <  7:17407/149‑1 (MQ=255)

                                                               cAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCt                                                                                 >  8:17407/1‑149 (MQ=255)

                                                                 gCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAGCCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTgg                                                                               >  5:123830/1‑149 (MQ=255)

                                                                 gCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTgg                                                                               <  5:243368/149‑1 (MQ=255)

                                                                 gCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTgg                                                                               <  5:112048/149‑1 (MQ=255)

                                                                  ccTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTggg                                                                                                                                      <  5:95456/93‑1 (MQ=255)

                                                                  ccTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTggg                                                                                                                                      >  6:95456/1‑93 (MQ=255)

                                                                  ccTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTggg                                                                              >  3:54630/1‑149 (MQ=255)

                                                                   cTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGt                                                                             >  5:310121/1‑149 (MQ=255)

                                                                    tCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTg                                                                            >  2:33561/1‑149 (MQ=255)

                                                                    tCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTg                                                                            >  4:199887/1‑149 (MQ=255)

                                                                           cccgGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCgg                                                                     <  4:54630/149‑1 (MQ=255)

                                                                           cccgGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCgg                                                                     <  2:76940/149‑1 (MQ=255)

                                                                             cgGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGga                                                                   <  5:94697/149‑1 (MQ=255)

                                                                             cgGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGga                                                                   <  5:316348/149‑1 (MQ=255)

                                                                              gggTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCgg                                                                     >  5:80429/1‑146 (MQ=255)

                                                                                gTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGac                                                                <  3:199887/149‑1 (MQ=255)

                                                                                    ggTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGactact                                                            <  6:269664/149‑1 (MQ=255)

                                                                                     gtgtGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTc                                                           <  3:206573/149‑1 (MQ=255)

                                                                                     gtgtGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTc                                                           >  2:204673/1‑149 (MQ=255)

                                                                                        tgCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTcccc                                                        <  1:74207/149‑1 (MQ=255)

                                                                                           gtgtCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAg                                                     >  3:133475/1‑149 (MQ=255)

                                                                                           gtgtCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCAATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAg                                                     >  1:64042/1‑149 (MQ=255)

                                                                                             gtCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTgg                                                                                                                <  6:381314/88‑1 (MQ=255)

                                                                                             gtCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTgg                                                                                                                >  5:381314/1‑88 (MQ=255)

                                                                                                  a‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTg                                              >  8:294648/1‑149 (MQ=255)

                                                                                                    ggTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCATGCGTGCATTGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGATCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGc                                             <  7:283716/149‑1 (MQ=255)

                                                                                                             aaaCCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGc                                    >  3:201445/1‑149 (MQ=255)

                                                                                                             aaaCCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGc                                    >  8:184521/1‑149 (MQ=255)

                                                                                                             aaaCCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGc                                    >  2:140079/1‑149 (MQ=255)

                                                                                                             aaaCCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGc                                    >  7:277814/1‑149 (MQ=255)

                                                                                                              aaCCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGcc                                   >  7:119420/1‑149 (MQ=255)

                                                                                                               aCCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCt                                  <  4:201445/149‑1 (MQ=255)

                                                                                                                cccTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTa                                 <  7:180523/149‑1 (MQ=255)

                                                                                                                cccTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTa                                 <  1:341264/149‑1 (MQ=255)

                                                                                                                cccTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTa                                 <  4:133475/149‑1 (MQ=255)

                                                                                                                 ccTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAg                                >  2:206989/1‑149 (MQ=255)

                                                                                                                           tCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGtt                      <  1:214346/149‑1 (MQ=255)

                                                                                                                              aTGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTg                                     >  1:214649/1‑131 (MQ=255)

                                                                                                                              aTGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTg                                     <  2:214649/131‑1 (MQ=255)

                                                                                                                               tGCGGATCTCTCCTTGCAGGCGTGCATGGTGGGTCGGACGCGCCATTGTCTTTGGACCAAGTATGTAGACGCGTACCGGGCTAGCTGGGTGCTCGCGGGAGACTACTGCCCTAGGACGGTGCGGATTCTGCCTAGGTAATACGTTTTc                   <  4:193981/148‑1 (MQ=255)

                                                                                                                               tGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTc                   <  4:156957/148‑1 (MQ=255)

                                                                                                                               tGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTc                   <  1:245999/148‑1 (MQ=255)

                                                                                                                               tGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTc                   <  2:218583/148‑1 (MQ=255)

                                                                                                                               tGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCg                  >  7:23630/1‑149 (MQ=255)

                                                                                                                                gCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTc                   >  6:385262/1‑147 (MQ=255)

                                                                                                                                gCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTc                   <  5:385262/147‑1 (MQ=255)

                                                                                                                                gCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCgg                 >  1:176537/1‑149 (MQ=255)

                                                                                                                                gCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCgg                 >  6:328269/1‑149 (MQ=255)

                                                                                                                                   gATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGc                >  1:196489/1‑147 (MQ=255)

                                                                                                                                       tctcCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAgcgc          >  5:67247/1‑149 (MQ=255)

                                                                                                                                       ccaccATGCACGCCTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAgcgc          >  6:242873/4‑149 (MQ=255)

                                                                                                                                       ccaccATGCACGCCTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAgcgc          >  6:23093/4‑149 (MQ=255)

                                                                                                                                       ccaccATGCACGCCTGCATGGAGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCt                                      >  2:1854/4‑121 (MQ=255)

                                                                                                                                       ccaccATGCACGCCTGCATGGAGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCt                                      <  1:1854/118‑1 (MQ=255)

                                                                                                                                        ctcCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACTGTGCGGATTCTGCCTAGGCAAAACGTATTCGGCAAGCGCt         >  5:352328/1‑149 (MQ=255)

                                                                                                                                         tcCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAg             <  3:201784/144‑1 (MQ=255)

                                                                                                                                         tcCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAGCGCTg        >  6:110487/1‑149 (MQ=255)

                                                                                                                                         tcCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAGCGCTg        >  5:73186/1‑149 (MQ=255)

                                                                                                                                         tcCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAGCGCTg        >  5:45714/1‑149 (MQ=255)

                                                                                                                                         tcCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAGCGCTg        >  2:286846/1‑149 (MQ=255)

                                                                                                                                         tcCATGCAGGCGTGCATGGTGGGTCGCACGCGCAATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGAGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAACAGCTTTTCGTCAAGCGCTg        >  6:372789/1‑149 (MQ=255)

                                                                                                                                          ccATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCaactcgcg        >  3:366653/1‑142 (MQ=255)

                                                                                                                                            aTGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTACGACGGTGCGGATTCTGCATAGGCAAAACGTTTTCGGCAAGCGCTGttt     <  1:33561/149‑1 (MQ=255)

                                                                                                                                             tGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAGCGCTGtttt    <  1:206989/149‑1 (MQ=255)

                                                                                                                                               cAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAGCGCTGtttttt  <  6:67247/149‑1 (MQ=255)

                                                                                                                                                aGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGCCGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGCCTACTCCGCTAGGACGGTGCGGCTTCTGCCTAGGCACAACGGTTTCGGCCAGCGATggtgtg   >  8:167337/1‑142 (MQ=255)

GACCAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATA‑GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAGCGCTGTTTTTT  >  NC_002947/875871‑876161

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`