| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 902,618 | C→G | 8.9% | intergenic (+44/+32) | trxB → / ← nadC | thioredoxin reductase/quinolinate phosphoribosyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 902,618 | 0 | C | G | 8.9% | 232.4 / 12.2 | 79 | intergenic (+44/+32) | trxB/nadC | thioredoxin reductase/quinolinate phosphoribosyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (33/39); new base G (4/3); total (37/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.66e-01 | |||||||||||
TGACCACGTTTACCGCCAGGCCATCACTTCGGCCGGTGCGGGCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCGAGATGTAGTCCACCCCCGTCTCGGCAATCACCCGCAGGGTCGTTTCGTTGAC > NC_002947/902472‑902763 | tGACCACGTTTACCGCCAGGCCATCACTTCGGCCGGTGCGGGCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGcc > 3:195874/1‑147 (MQ=255)tGACCACGTTTACCGCCAGGACATCACTTCGGCCGGTGCGGGCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTTAGAAAAAGGGGTGCAAAGAGACCCCAATAAAAAACCGGcc > 5:38577/1‑147 (MQ=255) aCCACGTTTACCGCCAGGCCATCACTTCGGCCGGTGCGGGCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCaa < 5:10878/147‑1 (MQ=255) ccACGTTTACCGCCAGGCCATCACTTCGGCCGGTGCGGGCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAgcg > 5:37840/1‑149 (MQ=255) ccACGTTTACCGCCAGGCCATCACTTCGGCCGGTGCGGGCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAgcg > 4:306334/1‑149 (MQ=255) ccGCCAGGCCATCACTTCGGCCGGTGCGGGCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGttttt < 7:153811/149‑1 (MQ=255) cGCCAGGCCATCACTTCGGCCGGTGCGGGCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGtttttt > 2:184/1‑149 (MQ=255) gCCAGGCCATCACTTCGGCCGGTGCGGGCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCGCTTGGCCGGTTTTTTa < 6:149087/149‑1 (MQ=255) gCCAGGCCATCACTTCGGCCGGTGCGGGCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTa > 4:16493/1‑149 (MQ=255) gCCAGGCCATCACTTCGGCCGGTGCGGGCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTa < 3:337657/149‑1 (MQ=255) ccAGGCCATCACTTCGGCCGGTGCGGGCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTAt > 4:235927/1‑149 (MQ=255) cAGGCCATCACTTCGGCCGGTGCGGGCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTAtt < 7:315099/149‑1 (MQ=255) cAGGCCATCACTTCGGCCGGTGCGGGCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTAtt > 2:243/1‑149 (MQ=255) cAGGCCATCACTTCGGCCGGTGCGGGCTGCATGGCGGCGCTGGATGGCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTAtt < 6:232106/149‑1 (MQ=255) gCCATCACTTCGGCCGGTGCGGGCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGcc > 6:61727/1‑149 (MQ=255) gCCATCACTTCGGCCGGTGCGGGCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGcc < 2:309265/149‑1 (MQ=255) ccATCACTTCGGCCGGTGCGGGCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCGCTTGGCCGGTTTTTTATTgggg < 1:317246/149‑4 (MQ=39) aTCACTTCGGCCGGTGCGGCCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTg > 2:184685/1‑148 (MQ=255) aCTTCGGCCGGTGCGGGCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTGGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGc < 2:53220/142‑1 (MQ=255) aCTTCGGCCGGTGCGGGCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGc > 1:53220/1‑142 (MQ=255) aCTTCGGCCGGTGCGGGCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAAt < 5:23088/149‑1 (MQ=255) ttCGGCCGGTGCGGGCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAAt > 1:167708/1‑147 (MQ=255) gCCGGTGCGGGCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCt > 2:172139/1‑148 (MQ=255) cGGTGCGGGCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTcac < 1:184/149‑1 (MQ=255) cGGTGCGGGCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTcac < 3:306334/149‑1 (MQ=255) cTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGt < 3:235927/149‑1 (MQ=255) cATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCGCTTGGCCGGTTTTTTAt < 5:158486/119‑1 (MQ=38) cATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCGCTTGGCCGGTTTTTTAt > 6:158486/1‑119 (MQ=38) aTGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCa > 4:4756/1‑149 (MQ=255) aTGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCa < 5:61727/149‑1 (MQ=255) tGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCAt > 6:378993/1‑149 (MQ=255) cggcgCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGa < 1:371411/149‑1 (MQ=255) ggcgCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGAc < 3:176937/149‑1 (MQ=255) gcgcTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACa < 1:31050/149‑1 (MQ=255) cgcTGGATGTCGAGCGCTACCTGGACGGTCTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAg < 5:333394/149‑1 (MQ=255) aTGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCAc > 2:96352/1‑149 (MQ=255) tGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCAcc > 7:292787/1‑149 (MQ=255) gcgcTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCTCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTc < 8:228732/149‑1 (MQ=255) gcgcTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTc < 6:287502/149‑1 (MQ=255) ccTGGACGGTTTGGTCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCAt > 6:208978/1‑124 (MQ=255) ccTGGACGGTTTGGTCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCAt < 5:208978/124‑1 (MQ=255) gACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTGGCATCGACAGGTCCACCGCTTTCACATCCTTg < 1:234557/148‑1 (MQ=255) gACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCtt < 7:332541/147‑1 (MQ=255) gACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTg < 1:184685/148‑1 (MQ=255) cGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTc < 7:121062/149‑1 (MQ=255) tttGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATg < 3:16493/149‑1 (MQ=255) tttGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATg < 6:38577/149‑1 (MQ=255) cGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATc < 7:238200/149‑1 (MQ=255) gCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATc > 6:327715/1‑148 (MQ=255) gCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCg < 3:4756/149‑1 (MQ=255) ccTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCga < 2:167708/149‑1 (MQ=255) ccTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCga > 2:258762/1‑149 (MQ=255) cTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATc > 5:121499/1‑146 (MQ=255) cTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCgag < 4:195874/149‑1 (MQ=255) gTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCgaga < 6:37840/147‑1 (MQ=255) gTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCATGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCGAGATg > 3:16226/1‑149 (MQ=255) gTTCTGATCTGAGAAAAAGGGGTGCAAAGCGACCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCGAGAt < 8:311657/148‑1 (MQ=255) ctgatctgaGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCGAGATGTa < 1:243/148‑1 (MQ=255) tgaGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCCGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGCCACCAATCGAGATGTAGTCCAcc > 7:350238/1‑149 (MQ=255) tgaGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAAGCGAGATGTAGTCCAcc > 6:375577/1‑149 (MQ=255) gggTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCGAGATGTAGTCCACCCCCGTCTCgg < 5:327715/149‑1 (MQ=255) gCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCGAGATGTAGTCCACCCCCGTCTCGGCAAt > 7:247567/1‑149 (MQ=255) ttgcaggcAATAAAAAACCGGCGCTTGGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCGAGATGTAGTCCACCCCCGTCTCGGCAATCAccc > 8:286631/8‑149 (MQ=38) gcgcCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCACTCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCGAGATGTAGTCCACCCCCGTCTCGGCAATCAccc < 4:270672/149‑1 (MQ=255) gcgcCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGGCATGGCACCAATCGAGATGTAGTCCACCCCCGTCTCGGCAATCAccc > 7:183770/1‑149 (MQ=255) gcgcCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCGCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCGAGATGTAGTCCACCCCCGTCTCGGCAATCAccc < 8:292787/149‑1 (MQ=255) cccccAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCATCAATCGAGATGTAGTCCACCCCCGTCTCGGCAATCACCCGCa < 1:258762/149‑1 (MQ=255) cccccAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCGAGATGTAGTCCACCCCCGTCTCGGCAATCACCCg > 2:146438/1‑147 (MQ=255) cccAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCGAGATGTAGTCCACCCCCGTCTCGGCAATCACCCGCAgg > 1:144116/1‑149 (MQ=255) ccAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCCCCAATCGAGATGTAGTCCCCCCCCGTCTCGGCAATCACCCGCAggg > 5:361480/1‑149 (MQ=255) cAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCGAGATGTAGTCCACCCCCGTCTCGGCAATCACCCGCAGGGt > 7:298873/1‑149 (MQ=255) cAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCGAGATGTAGTCCACCCCCGTCTCGGCAATCACCCGCAGGGt > 1:19921/1‑149 (MQ=255) aaTAAAAAACCGGCGCTTGGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCGAGATGTAGTCCACCCCCGTCTCGGCAATCACCCGCAGGGtc > 2:196809/1‑149 (MQ=255) aaTAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCGAGATGTAGTCCACCCCCGTCTCGGCAATCACCCGCAGGGtc > 7:263455/1‑149 (MQ=255) tAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCCTTCACATCCTTGGTCATGGCACCAATCGAGATGTAGTCCACCCCCGTCTCGGCAATCACCCGCAGGGtcgt > 5:118821/1‑149 (MQ=255) aaaaaaCCGGCGCTTGGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCGAGATGTAGTCCACCCCCGTCTCGGCAATCACCCGCAGGGtcgtt > 3:94534/1‑149 (MQ=255) aaaaaCCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCGAGATGTAGTCCACCCCCGTCTCGGCAATCACCCGCAGGGtcgttt > 2:351873/1‑149 (MQ=255) aaCCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCGAGATGTAGTCCACCCCCGTCTCGGCAATCACCCGCAGGGtcgtttcgt < 8:247567/149‑1 (MQ=255) aCCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCGAGATGTAGTCCACCCCCGTCTCGGCAATCACCCGCAGGGtcgtttcgtt < 1:146438/149‑1 (MQ=255) ccGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCGAGATGTAGTCCACCCCCGTCTCGGCAATCACCCGCAGGGTCGTTTCGTTg < 6:121499/149‑1 (MQ=255) ggCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCGAGATGTAGTCCACCCCCGTCTCGGCAATCACCCGCAGGGTCGTTTCGTTGAc > 8:106905/1‑149 (MQ=255) | TGACCACGTTTACCGCCAGGCCATCACTTCGGCCGGTGCGGGCTGCATGGCGGCGCTGGATGTCGAGCGCTACCTGGACGGTTTGGCCAACGCCTCGTTCTGATCTGAGAAAAAGGGGTGCAAAGCGCCCCCAATAAAAAACCGGCCAAGCGCCGGTTTTTTATTGCCTGCAATCAGCTCACAGGCTCAGTCGCATCGACAGGTCCACCGCTTTCACATCCTTGGTCATGGCACCAATCGAGATGTAGTCCACCCCCGTCTCGGCAATCACCCGCAGGGTCGTTTCGTTGAC > NC_002947/902472‑902763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |