Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,065,725 T→A 5.7% E40D (GAA→GAT)  PP_0923 ← acyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,065,7250TA 5.7% 239.2 / 2.8 82E40D (GAA→GAT) PP_0923acyltransferase
Reads supporting (aligned to +/- strand):  ref base T (35/41);  new base A (3/2);  total (38/44)
Fisher's exact test for biased strand distribution p-value = 6.61e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.32e-01

CATGCCAAGCAGGGGGATGTCGGTCCAGGAAACATGGTTGCTGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTACCCGCAACTTCGGCATCAGACCGCCGCCTTGAAGTGGCGGGCG  >  NC_002947/1065578‑1065871
                                                                                                                                                   |                                                                                                                                                  
cATGCCAAGCAGGGGGATGTCGGTCCAGGAAACATGGTTGCTGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGtt                                                                                                                                                   <  2:245257/149‑1 (MQ=255)
 aTGCCAAGCAGGGGGATGTCGGTCCAGGAAACATGGTTGCTGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTc                                                                                                                                                  <  7:276532/149‑1 (MQ=255)
   gCCAAGCAGGGGGATGTCGGTCCAGGAAACATGGTTGCTGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGa                                                                                                                                                >  5:51762/1‑149 (MQ=255)
    ccAAGCAGGGGGATGTCGGTCCAGGAAACATGGTTGCTGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGAt                                                                                                                                               <  8:183084/149‑1 (MQ=255)
     cAAGCAGGGGGATGTCGGTCCAGGAAACATGGTTGCTGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACTGGCAGGTCCAGCGCTGGCGCCGTTCGATc                                                                                                                                              <  1:28017/149‑1 (MQ=255)
     cAAGCAGGGGGATGTCGGTCCAGGAAACATGGTTGCTGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATc                                                                                                                                              <  8:115769/149‑1 (MQ=255)
     cAAGCAGGGGGATGTCGGTCCAGGAAACATGGTTGCTGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATAAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATc                                                                                                                                              >  7:178497/1‑149 (MQ=255)
      aaGCAGGGGGATGTCGGTCCAGGAAACATGGTTGCTGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCg                                                                                                                                             >  5:130531/1‑149 (MQ=255)
           gggggATGTCGGTCCAGGAAACATGGTTGCTGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGcc                                                                                                                                        <  7:147141/149‑1 (MQ=255)
            ggggATGTCGGTCCAGGAAACATGGTTGCTGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCt                                                                                                                                       <  3:339582/149‑1 (MQ=255)
             gggATGTCGGTCCAGGAAACATGGTTGCTGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCtt                                                                                                                                      <  7:110098/149‑1 (MQ=255)
             gggATGTCGGTCCAGGAAACATGGTTGCTGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCtt                                                                                                                                      <  6:130531/149‑1 (MQ=255)
             gggATGTCGGTCCAGGAAACATGGTTGCTGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCtt                                                                                                                                      <  7:9598/149‑1 (MQ=255)
             gggATGTCGGTCCAGGAAACATGGTTGCTGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCtt                                                                                                                                      <  8:232097/149‑1 (MQ=255)
                      gTCCAGGAAACATGGTTACTGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGCTCGGCGCCTTGAAGccc                                                                                                                               >  2:227894/1‑147 (MQ=255)
                       tCCAGGAAACATGGTTGCTGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAg                                                                                                                            >  3:297003/1‑149 (MQ=255)
                            gAAACATGGTTGCTGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTc                                                                                                                       >  4:208646/1‑149 (MQ=255)
                            gAAACATGGTTGCTGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTc                                                                                                                       >  3:364449/1‑149 (MQ=255)
                              aaCATGGTTGCTGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGc                                                                                                                     <  2:137849/149‑1 (MQ=255)
                                   ggTTGCTGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAg                                                                                                                >  3:335126/1‑149 (MQ=255)
                                    gTTGCTGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAg                                                                                                                <  2:321207/148‑1 (MQ=255)
                                     ttGCTGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGc                                                                                                              >  3:113651/1‑149 (MQ=255)
                                         tGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGtt                                                                                                                                                   >  4:354481/1‑108 (MQ=255)
                                         tGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGtt                                                                                                                                                   <  3:354481/108‑1 (MQ=255)
                                          gACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATaa                                                                                                         >  4:95178/1‑149 (MQ=255)
                                           aCCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATaa                                                                                                         <  8:290380/148‑1 (MQ=255)
                                           aCCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAAt                                                                                                        >  7:266276/1‑149 (MQ=255)
                                           aCCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAAt                                                                                                        >  4:204659/1‑149 (MQ=255)
                                             ccACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGc                                                                                                      >  6:200288/1‑149 (MQ=255)
                                               acaacaTCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTg                                                                                                    <  4:364449/149‑1 (MQ=255)
                                               acaacaTCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTg                                                                                                    >  3:93106/1‑149 (MQ=255)
                                                caacaTCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTgg                                                                                                   <  2:181288/149‑1 (MQ=255)
                                                       ggCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCa                                                                                             <  3:164972/148‑1 (MQ=255)
                                                       ggCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAg                                                                                            <  6:51762/149‑1 (MQ=255)
                                                        gCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGc                                                                                           <  5:200288/149‑1 (MQ=255)
                                                               cGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGccc                                                                                     <  1:253586/148‑1 (MQ=255)
                                                               cGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCt                                                                                    >  6:361461/1‑149 (MQ=255)
                                                                ggAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTg                                                                                                    <  2:282450/132‑1 (MQ=255)
                                                                ggAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTg                                                                                                    >  1:282450/1‑132 (MQ=255)
                                                                 gAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTgc                                                                                  <  1:159540/149‑1 (MQ=255)
                                                                      tCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGccag                                                                             >  1:290550/1‑149 (MQ=255)
                                                                       cGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGccag                                                                             <  6:227534/148‑1 (MQ=255)
                                                                        gCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGccagca                                                                           >  6:198252/1‑149 (MQ=255)
                                                                         ccGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGccagcac                                                                          <  2:145624/149‑1 (MQ=255)
                                                                            aCTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGccagcaccag                                                                       <  3:262611/149‑1 (MQ=255)
                                                                                ccTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGccagcaccagca                                                                     <  5:339899/147‑1 (MQ=255)
                                                                                ccTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGccagcaccagca                                                                     >  6:339899/1‑147 (MQ=255)
                                                                                ccTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACcagcag                                                                    >  5:165204/1‑148 (MQ=255)
                                                                                      cGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTc                                                               <  8:213889/147‑1 (MQ=255)
                                                                                      cGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTc                                                               >  7:213889/1‑147 (MQ=255)
                                                                                       gTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGa                                                            >  8:279188/1‑149 (MQ=255)
                                                                                          gAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGAt                                                           >  5:349424/1‑147 (MQ=255)
                                                                                               gcagggcagCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCgg                                                    >  1:160187/1‑149 (MQ=255)
                                                                                               gcagggcagCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCgg                                                    <  3:204659/149‑1 (MQ=255)
                                                                                                cagggcagCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCggg                                                   <  4:335126/149‑1 (MQ=255)
                                                                                                   ggcagCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCa                                                <  5:361461/149‑1 (MQ=255)
                                                                                                   ggcagCGACCAGGCGCTTCATAAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCa                                                <  8:178497/149‑1 (MQ=255)
                                                                                                    gcagCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATc                                                                                              >  6:176974/1‑102 (MQ=255)
                                                                                                    gcagCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATc                                                                                              <  5:176974/102‑1 (MQ=255)
                                                                                                       gCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTAc                                            <  7:279188/149‑1 (MQ=255)
                                                                                                           ccAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTACCCGc                                        <  4:93106/149‑1 (MQ=255)
                                                                                                                 gcTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGGTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTACCCGCAACTTc                                  <  2:290550/149‑1 (MQ=255)
                                                                                                                  cTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTACCCGCAACTTCg                                 >  7:1822/1‑149 (MQ=255)
                                                                                                                     cATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTACCCGCAACTTCgg                                <  6:165204/147‑1 (MQ=255)
                                                                                                                       tGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTACCCGCAACTTCGGCAt                             >  5:188508/1‑148 (MQ=255)
                                                                                                                       tGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTACCCGCAACTTCGGCAt                             >  5:74528/1‑148 (MQ=255)
                                                                                                                       tGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTACCCGCAACTTCGGCATc                            <  6:188508/149‑1 (MQ=255)
                                                                                                                            aggcaggTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTACCCGCAACTTCGGCATCAGAcc                       <  6:74528/149‑1 (MQ=255)
                                                                                                                              gcaggTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTACCCGCAACTTCGGCAt                             <  3:10214/141‑1 (MQ=255)
                                                                                                                              gcaggTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTACCCGCAACTTCGGCAt                             >  4:10214/1‑141 (MQ=255)
                                                                                                                              gcaggTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTACCCGCAACTTCGGCATCAGAccgc                     >  1:164923/1‑149 (MQ=255)
                                                                                                                              gcaggTCCAGCGCTGGCGCCGTTCGATCGGAGCCTTGCAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCAAGTACCCGCAACTTCGGCATCAGAccgc                     >  5:349900/1‑149 (MQ=255)
                                                                                                                                   tCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCCATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGACGCGGGCCAGTACCCGCACCTTCGGCATCAGACCGCCGCCt                >  4:12114/1‑149 (MQ=255)
                                                                                                                                     cAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTACCCGCAACTTCGGCATCAGACCGCCGCCtt               >  7:221786/1‑148 (MQ=255)
                                                                                                                                      cttcaaggCGCCGATCGAACGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTACCAGCAACTTCGGCATCAGACcgccgc                  <  8:325588/138‑1 (MQ=255)
                                                                                                                                      cttcaaggCGCCGATCGAACGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTACCAGCAACTTCGGCATCAGACcgccgc                  >  7:325588/7‑144 (MQ=255)
                                                                                                                                      aGCGCTGGCGCCGTTCGATCGGCTCCTTTAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCTGGATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTACCCGGAACTTCGGCATCAGACCGCCGCCTTGa             <  6:349900/149‑1 (MQ=255)
                                                                                                                                       gcgcTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTACCCGCAACTTCGGCATCAGACCGCCGCCTTg              >  5:15538/1‑147 (MQ=255)
                                                                                                                                         caaggCGCCGATCGAACGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTACCCGCAACTTCGGCATCAGACCGCCGCCTTGAAGt          >  7:211247/4‑149 (MQ=255)
                                                                                                                                          aaggCGCCGATCGAACGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTACCCGCAACTTCGGCATCAGACCGCCGCCTTGAAGTg         >  6:105715/3‑149 (MQ=255)
                                                                                                                                             gcgcCGTTCTATCGTCGCCTTGAAGCCCAAGCGTTAGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTACCCGCAACTTCGGCATCAGACCGCCGCCTTGAAGTggc       <  8:266276/148‑1 (MQ=255)
                                                                                                                                             gcgcCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTACCCGCAACTTCGGCATCAGACCGCCGCCTTGAAGTggcg      <  3:208646/149‑1 (MQ=255)
                                                                                                                                              cgcCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTACCCGCAACTTCGGCATCAGACCGCCGCCTTGAAGTggcgg     <  1:227894/149‑1 (MQ=255)
                                                                                                                                              cgcCGATCGAACGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTACCCGCAACTTCGGCATCAGACCGCCGCCTTGAAGTggcgg     <  5:105715/149‑1 (MQ=255)
                                                                                                                                                 cGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTACCCGCAACTTCGGCATCAGACCGCCGCCTTGAAGTggcgggcg  >  5:245132/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
CATGCCAAGCAGGGGGATGTCGGTCCAGGAAACATGGTTGCTGACCCACAACATCGGCCGTTGCGGAAGTTCGCCGACTACCTTGACGTCGAAGGGCAGGGCAGCGACCAGGCGCTTCATGAACAGGCAGGTCCAGCGCTGGCGCCGTTCGATCGGCGCCTTGAAGCCCAAGCGTTCGCCCAAGGCGATAATGCTGGCCATCAGCATGCCCTGCGCCAGCACCAGCAGCAGTCGGATGAGGCGGGCCAGTACCCGCAACTTCGGCATCAGACCGCCGCCTTGAAGTGGCGGGCG  >  NC_002947/1065578‑1065871

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑