| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 134,397 | A→C | 5.4% | D98A (GAT→GCT) ‡ | PP_0129 → | GGDEF domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 134,397 | 0 | A | C | 5.4% | 292.7 / 6.4 | 93 | D98A (GAT→GCT) ‡ | PP_0129 | GGDEF domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base A (46/42); new base C (3/2); total (49/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.84e-01 | |||||||||||
GGTGGTAGACGAGTGCATGAAGGAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGC > NC_002947/134251‑134542 | ggtggtAGACGAGTGCATGAAGGAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATg > 4:362974/1‑149 (MQ=255) gtggtAGACGAGTGCATGAAGGAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATgc > 1:167873/1‑149 (MQ=255) gtggtAGACGAGTGCATGAAGGAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACT‑GATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATgcg > 4:367046/1‑149 (MQ=255) gtACACGAGTGCATGAAGGAAATGCGCGATGTCATTCGCAGCCACAACATGGACGCCGGCCTCGCTCGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCt > 4:136322/1‑149 (MQ=255) gACGAGTGCATGAAGGAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGa < 3:369367/148‑1 (MQ=255) gACGAGTGCATGAAGGAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGAc > 3:343043/1‑149 (MQ=255) gTGCATGAAGGAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCAc > 8:85473/1‑149 (MQ=255) aTGAAGGAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGt > 8:27377/1‑149 (MQ=255) aTGAAGGAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGt > 7:295276/1‑149 (MQ=255) tGAAGGAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGtt > 4:332069/1‑149 (MQ=255) aaGGAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTgg > 1:128729/1‑145 (MQ=255) aaGGAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTgg < 2:128729/145‑1 (MQ=255) aaGGAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTgg > 1:326025/1‑149 (MQ=255) aaGGAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTg < 8:278430/148‑1 (MQ=255) aGGAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGc < 8:202796/149‑1 (MQ=255) ggAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGc > 3:104914/1‑148 (MQ=255) cgcgATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGc < 1:26955/148‑1 (MQ=255) gcgATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCaa < 2:167873/149‑1 (MQ=255) cgATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAg < 7:281224/149‑1 (MQ=255) gTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGcct > 4:261544/1‑149 (MQ=255) gTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGcct > 3:129985/1‑149 (MQ=255) cATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGCATCGCTGAcctgg < 1:3639/124‑4 (MQ=255) cATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGCATCGCTGAcctgg > 2:3639/1‑121 (MQ=255) aTTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGc < 7:53737/139‑1 (MQ=255) aTTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGcctgcc > 8:86734/1‑149 (MQ=255) aTTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAAAAGCGTAGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGATGACCGCACTGGTTGGCCAAATga > 8:53737/1‑138 (MQ=255) ttCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGcctgccc > 6:59110/1‑149 (MQ=255) gACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGc < 8:139488/135‑1 (MQ=255) gACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGc > 7:139488/1‑135 (MQ=255) caTGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGata > 1:365753/1‑149 (MQ=255) aTGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGatat > 8:75821/1‑149 (MQ=255) aTGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGatat > 7:353587/1‑149 (MQ=255) cGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTcgc > 2:108805/1‑149 (MQ=255) gCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTcgcg < 2:365753/149‑1 (MQ=255) cGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGcctgc > 7:249047/1‑125 (MQ=255) cGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGcctgc < 8:249047/125‑1 (MQ=255) ggCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGcc < 2:326025/149‑1 (MQ=255) ccTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGACAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCag > 4:293747/1‑148 (MQ=255) tCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCAtt > 4:83735/1‑148 (MQ=255) tCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCAtt > 7:255382/1‑148 (MQ=255) ggCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGaaaa > 4:88280/1‑148 (MQ=255) cTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAAc < 1:139197/149‑1 (MQ=255) ttGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACt > 1:190436/1‑149 (MQ=255) gATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTg < 3:332069/148‑1 (MQ=255) aTTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTgg < 8:255382/148‑1 (MQ=255) aTTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGc > 6:189609/1‑149 (MQ=255) ttCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGc > 3:200473/1‑148 (MQ=255) ccGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCga < 2:27198/148‑1 (MQ=255) cgcgCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCgaag < 3:136322/149‑1 (MQ=255) gcgcCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCgaag > 3:116450/1‑148 (MQ=255) cTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCt > 3:183027/1‑149 (MQ=255) agaAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGa < 2:190436/148‑1 (MQ=255) gaAAGCGGTACTGGATACCTAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAgg < 2:334220/149‑1 (MQ=255) ggTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCgggg < 4:314785/149‑1 (MQ=255) gATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGccc < 3:362974/148‑1 (MQ=255) gATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGccc < 8:219958/148‑1 (MQ=255) gATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGcc > 4:269621/1‑147 (MQ=255) gATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCa < 8:353587/149‑1 (MQ=255) gATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCa < 3:83735/149‑1 (MQ=255) ttCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGt > 8:333214/1‑149 (MQ=255) cctaaCAGCGTCGCGAAACCCGTATTAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTc < 7:296503/145‑1 (MQ=255) ccGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTc < 4:343043/148‑1 (MQ=255) ccGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTc < 4:99743/148‑1 (MQ=255) cGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCAc < 3:367046/149‑1 (MQ=255) cGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCAc < 4:104914/149‑1 (MQ=255) gAACAGCGTCGCGAAACCCGCATGAACCAGGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCAc > 1:33676/1‑149 (MQ=255) gAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCAcg > 1:368030/1‑149 (MQ=255) gAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCAcg > 3:3837/1‑149 (MQ=255) gAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCAcg > 1:16655/1‑149 (MQ=255) aaCAGGGTCGCGAAACCCTCATGAACCA‑GGTCAGCGATGCGCTGACCGAACTGGTTGGCAAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAATCTTGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCAcgc < 3:293747/149‑1 (MQ=255) aaCAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCAcgc > 7:240829/1‑149 (MQ=255) cAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGa < 2:33676/149‑1 (MQ=255) tCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTgc > 2:112954/1‑149 (MQ=255) cgcgAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTgcc > 2:140341/1‑149 (MQ=255) aaCCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGt < 1:162986/131‑1 (MQ=255) aaCCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGt > 2:162986/1‑131 (MQ=255) aCCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTTAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCTCCGCt > 7:58972/1‑149 (MQ=255) ccGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGt > 3:153467/1‑149 (MQ=255) cGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGtt > 2:115582/1‑149 (MQ=255) cGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGtt < 4:183027/149‑1 (MQ=255) cGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGtt < 1:43226/149‑1 (MQ=255) tGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGc < 3:269621/149‑1 (MQ=255) aaCCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGa < 7:85473/149‑1 (MQ=255) agtgcggTCAGCGCATCGCTGACCTCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGa < 8:219494/99‑1 (MQ=255) agtgcggTCAGCGCATCGCTGACCTCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGa > 7:219494/6‑104 (MQ=255) aCCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAg < 7:75821/149‑1 (MQ=255) aCCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAg < 5:59110/149‑1 (MQ=255) cA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGtt > 6:134898/1‑149 (MQ=255) cggTCAGCGCATCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTG‑CCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGtt > 2:158771/2‑147 (MQ=255) gTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAg < 4:200473/149‑1 (MQ=255) tCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGTTGCCGCCGCTGTTGGGCGAGTTGAGc < 7:27377/149‑1 (MQ=255) aGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCg < 4:116450/148‑1 (MQ=255) gCGATGCGCGGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGc < 8:295276/149‑1 (MQ=255) | GGTGGTAGACGAGTGCATGAAGGAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCA‑GGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGC > NC_002947/134251‑134542 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |