| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,400,874 | A→T | 7.9% | intergenic (+37/‑132) | ybgF → / → queE | TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,400,874 | 0 | A | T | 7.9% | 219.9 / 5.8 | 75 | intergenic (+37/‑132) | ybgF/queE | TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase |
| Reads supporting (aligned to +/- strand): ref base A (38/31); new base T (2/4); total (40/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.09e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCGCCGTATGGGCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGACACATTAC > NC_002947/1400726‑1401021 | gcgcCGTATGGGCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCa < 5:266087/149‑1 (MQ=255) tGGGCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCgg < 1:33446/148‑1 (MQ=255) gCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGttt > 4:142819/1‑149 (MQ=255) cATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCTCTCGAAAGAAACCCGCGCCAGTCGCGGGttttt < 1:313/149‑1 (MQ=255) aTACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGtttttt < 2:356409/149‑1 (MQ=255) tACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGACTGGCGCGGGtttcttt < 8:110288/149‑2 (MQ=255) ccGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGACTGGCGCGGGtttctttc < 5:213300/148‑3 (MQ=255) gACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGtttttt < 6:40152/144‑1 (MQ=255) gACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGtttttt > 5:40152/1‑144 (MQ=255) gTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCa > 8:82888/1‑149 (MQ=255) tAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCAc < 3:175441/149‑1 (MQ=255) aaaaGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACt > 3:160783/1‑149 (MQ=255) gCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑t < 7:173183/149‑1 (MQ=255) cTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑tttttt > 7:178678/1‑149 (MQ=255) cagcagGGCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTc < 2:132360/147‑1 (MQ=255) agcagGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGt > 6:78048/1‑148 (MQ=255) gcagGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTa > 4:135066/1‑148 (MQ=255) gACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACgctgc > 8:10073/1‑149 (MQ=255) ccAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCtgctgc < 7:82888/149‑1 (MQ=255) ccAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCtgctgc > 5:188303/1‑149 (MQ=255) ccAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCtgctgc > 5:322923/1‑149 (MQ=255) ccAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCtgctgc > 5:92941/1‑149 (MQ=255) gTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGa > 7:225068/1‑149 (MQ=255) tACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGa > 7:195200/1‑148 (MQ=255) cccGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAAc < 8:41301/149‑1 (MQ=255) ccGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACg < 4:2911/149‑1 (MQ=255) cGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGc > 4:186613/1‑149 (MQ=255) ccGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGa < 8:195200/146‑1 (MQ=255) ccGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTc < 8:178678/149‑1 (MQ=255) gCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCcg > 2:4029/1‑149 (MQ=255) gCTCAACTGGAACAGCGTGACCTGCAGAAGCACTAGGCGTAGTCGCTGTACCGCTCGAAAGAAACCCCCGCCAGTCGCGGGTTATTTCGTTAGAATAAATGCAC‑TTTTTTCGTAAAAAAGGTGCTGCGGATAACGCTATTTCTAGTCcg > 2:300536/1‑149 (MQ=255) cTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCcgc < 5:78048/149‑1 (MQ=255) gCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCGTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTg > 4:173033/1‑149 (MQ=255) gCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGt < 6:188303/147‑1 (MQ=255) ccAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCt < 6:80816/149‑1 (MQ=255) ccAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCt > 5:302255/1‑149 (MQ=255) gCGTGACCTGCAGAAGGTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAAGCCGCGCCAGTCGCGGGTTTTTTTGTTATAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGAc < 1:300536/149‑1 (MQ=255) ccTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGc < 1:4029/149‑1 (MQ=255) ccTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCGCGAAAGAAACCCGCGCCAGGCGCGGGTTTTTTCGTTAGCATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGc < 3:233545/149‑1 (MQ=255) cTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACg < 4:52653/99‑1 (MQ=255) cTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGc > 4:233545/1‑148 (MQ=255) cTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCg > 5:58240/1‑149 (MQ=255) cAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGAc < 6:302255/149‑1 (MQ=255) aGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACa > 5:294243/1‑149 (MQ=255) aGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGcc < 7:281497/149‑1 (MQ=255) ctAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGtt > 8:27644/1‑149 (MQ=255) gCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAaca > 4:324531/1‑82 (MQ=255) gCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAaca < 3:324531/82‑1 (MQ=255) cGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCt < 4:335010/149‑1 (MQ=255) gTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTg > 6:299439/1‑149 (MQ=255) tCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTc < 4:81023/100‑1 (MQ=255) cGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACg > 2:172947/1‑149 (MQ=255) cGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTaaa > 2:202969/1‑65 (MQ=255) cGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGAAGGAGGCGGACAGCCTGTTTAGCAGTCACGCCCGTGGc > 3:86640/1‑149 (MQ=255) cTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGc > 6:190026/1‑147 (MQ=255) cTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGa < 6:322923/149‑1 (MQ=255) tCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAg > 5:293317/1‑149 (MQ=255) tCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCCATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAg > 1:318784/1‑149 (MQ=255) tCGAAAGAAACCCCCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAg > 6:247532/1‑149 (MQ=255) gaaagaaaCCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGc < 7:10073/148‑1 (MQ=255) gaaagaaaCCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCa > 8:291289/1‑149 (MQ=255) gaaagaaaCCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCCGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCa > 3:109509/1‑149 (MQ=255) aaagaaaCCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCAt > 5:330493/1‑149 (MQ=255) aaaaaCCCGCGACTGGCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGa > 1:194042/3‑143 (MQ=255) aaaaaCCCGCGACTGGCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGa < 2:194042/141‑1 (MQ=255) gaaaCCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGc > 1:130986/1‑148 (MQ=255) gaaaCCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCa < 6:294243/149‑1 (MQ=255) aaaaCCCGCGACTGGCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCt < 2:354842/125‑1 (MQ=255) aaaaCCCGCGACTGGCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCt > 1:354842/2‑126 (MQ=255) aaaCCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCTAGTCCGCGACAGTGCCTGACGGAGGc < 2:263076/108‑1 (MQ=255) aaaCCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGc > 1:263076/1‑108 (MQ=255) aaaCCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCaa < 8:225068/149‑1 (MQ=255) aaaCCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCaa < 6:92941/149‑1 (MQ=255) ccGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGaca > 7:168726/1‑149 (MQ=255) cgcgCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGCGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGaca > 4:210567/1‑148 (MQ=255) cAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGACACATTAc < 6:6915/149‑1 (MQ=255) | GCGCCGTATGGGCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCC‑TTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGACACATTAC > NC_002947/1400726‑1401021 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |