| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,458,117 | T→G | 8.2% | intergenic (+17/+23) | PP_1276 → / ← algA | hypothetical protein/mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,458,117 | 0 | T | G | 8.2% | 185.6 / 7.4 | 64 | intergenic (+17/+23) | PP_1276/algA | hypothetical protein/mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (32/26); new base G (3/2); total (35/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.12e-01 | |||||||||||
GACTGCCACAAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTCGAT > NC_002947/1457980‑1458259 | gACTGCCACAAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAgggg > 7:286542/1‑149 (MQ=255) aCTGCCACAAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAg < 6:59349/145‑1 (MQ=255) aCTGCCACAAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAg > 5:59349/1‑145 (MQ=255) aCTGCCACAAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGGCTGACCAGGGGc < 5:135008/149‑1 (MQ=255) ccACAAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGt > 5:252485/1‑149 (MQ=255) ccACAAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGt > 4:15847/1‑149 (MQ=255) acaAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGt > 8:161905/1‑147 (MQ=255) aGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACt > 2:121414/1‑149 (MQ=255) aGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACt < 3:15847/149‑1 (MQ=255) gCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTgcg < 4:70399/149‑1 (MQ=255) cTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTc > 8:154218/1‑149 (MQ=255) ttCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACCATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTc > 1:107746/1‑149 (MQ=255) ttCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCt > 6:253304/1‑149 (MQ=255) ttCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCt > 4:317176/1‑149 (MQ=255) ttCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCt > 1:132116/1‑149 (MQ=255) gAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGA‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCa < 5:362156/149‑1 (MQ=255) aaTTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCAc < 1:278976/149‑1 (MQ=255) aaTTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGACGGTCTTCAc < 2:8495/149‑1 (MQ=255) ttGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCg > 8:319633/1‑148 (MQ=255) gAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGaaa > 7:59442/1‑149 (MQ=255) gaggaTGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAAcgccgc < 3:317176/149‑1 (MQ=255) gatgatTTGCAGCGACCTTTCAGGGTGGTGGGTGACCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCt > 4:353902/1‑149 (MQ=255) tttGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATg > 7:159189/1‑149 (MQ=255) tttGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATg < 7:161905/149‑1 (MQ=255) tttGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATg > 4:55718/1‑149 (MQ=255) tGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATgg < 5:32350/148‑1 (MQ=255) cAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATgggg < 3:40608/148‑1 (MQ=255) aGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGt < 8:286542/149‑1 (MQ=255) gCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTg < 3:55718/149‑1 (MQ=255) cGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTgg < 2:132116/149‑1 (MQ=255) cGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTg > 1:246751/1‑148 (MQ=255) cGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTg > 2:134563/1‑148 (MQ=255) cTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGt > 5:164912/1‑149 (MQ=255) cTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGt > 7:83048/1‑149 (MQ=255) tttCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAg > 4:212884/1‑83 (MQ=255) tttCAGGGTGGAGGGTGGACCATTCGA‑CATCAACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCAGGTCAGCCCAGGGGAGAGTCAGCATTTACTGCGCGATCGTCATCACCGAAACGCCGCGCTCGATGGGGGTGGACGTg > 2:82941/1‑149 (MQ=255) gggtggCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATAcaca > 6:158035/1‑149 (MQ=255) gggggCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCCTCCCTGCCCCTCCCATGACGAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATac < 1:121414/146‑1 (MQ=255) tggCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATgggg < 3:140377/125‑1 (MQ=255) tggCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATgggg > 4:140377/1‑125 (MQ=255) tggCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATcc < 8:59442/149‑1 (MQ=255) cATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGaa < 6:164912/149‑1 (MQ=255) cATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGaa < 2:107746/149‑1 (MQ=255) cATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGaa < 7:154218/149‑1 (MQ=255) ttCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAgc > 5:94562/1‑149 (MQ=255) gA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATaca < 8:29742/134‑1 (MQ=255) gA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATaca > 7:29742/1‑134 (MQ=255) cATCTACTTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGACGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAgagatag > 7:244834/1‑143 (MQ=255) cATCTACGTCATAGCACCGAGAGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTTCGCGATGGTCTTCACCGAAACGACGCGCTCGATGGGGGTGGACGTGCGCCAATACACATCCTCTaa < 8:244834/142‑1 (MQ=255) cTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGGGGACGTGCGCCCATACACATCCTCGAAGCGCTCGAt < 6:252485/148‑1 (MQ=255) gTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCAt > 2:315981/1‑149 (MQ=255) ttGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCt > 5:170292/1‑149 (MQ=255) gCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACt > 7:129395/1‑149 (MQ=255) g‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCAc > 4:167363/1‑149 (MQ=255) tC‑‑‑GCCCCTGGGCTGACCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGa > 5:254612/1‑141 (MQ=255) tC‑‑‑GCCCCTGGGCTGACCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGa < 6:254612/141‑1 (MQ=255) gCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTCg < 1:134563/149‑1 (MQ=255) gCCCCTGGGCTGACCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTc > 7:278586/1‑148 (MQ=255) gCCACTGGTCAGACCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCt < 7:170962/147‑1 (MQ=255) ccccTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTCga < 3:353902/149‑1 (MQ=255) ccccTGGGCTGACCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTCga > 6:41343/1‑149 (MQ=255) cccTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTCgat < 6:94562/149‑1 (MQ=255) cccTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTCga < 7:42380/148‑1 (MQ=255) cccTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTCga > 8:42380/1‑148 (MQ=255) | GACTGCCACAAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGA‑CATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGG‑CTC‑‑‑GCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTCGAT > NC_002947/1457980‑1458259 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |