Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 1,469,814 | A→T | 9.7% | L110Q (CTG→CAG) | algK ← | alginate biosynthesis protein AlgK |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 1,469,814 | 0 | A | T | 9.7% | 177.6 / 8.4 | 62 | L110Q (CTG→CAG) | algK | alginate biosynthesis protein AlgK |
Reads supporting (aligned to +/- strand): ref base A (31/25); new base T (3/3); total (34/28) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 |
GGGGAAACTCTGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAGCCCAGGTCGGCCAG > NC_002947/1469675‑1469962 | ggggAAACTCTGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTGTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑cc > 6:139645/1‑147 (MQ=255) gggAAACTCTGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCaa < 6:125335/148‑1 (MQ=255) ggAAACTCTGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAgg < 3:70378/149‑1 (MQ=255) ggAAACTCTGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGCCTTGGCCGCCTGCTGGTGG‑CCAAgc > 3:277601/1‑148 (MQ=255) ggAAACTCTGCGGGTAGCTGAGGTAGAGCAGTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCGCCTGCTGGTGG‑CCAAgc < 5:215988/149‑2 (MQ=255) gAAACTCTGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGCCTTGGCCGCCTGCTGGTGG‑CCAAgcc < 3:47967/149‑3 (MQ=255) gAAACTCTGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGCCTTGGCCGCCTGCTGGTGG‑CCAAgcc < 4:277601/149‑3 (MQ=255) gCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGt < 5:139645/148‑1 (MQ=255) cTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTgg > 7:186647/1‑149 (MQ=255) tGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGc > 5:199412/1‑149 (MQ=255) tGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGc > 7:184357/1‑149 (MQ=255) aGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGc < 4:297393/147‑1 (MQ=255) cATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTggcgg > 3:273072/1‑149 (MQ=255) cATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTACTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTggcgg > 7:144076/1‑149 (MQ=255) ttGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGcc < 3:198197/149‑1 (MQ=255) ccAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCg > 3:254573/1‑147 (MQ=255) ccAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCa < 6:199412/149‑1 (MQ=255) gCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAgcg > 5:118416/1‑149 (MQ=255) aTCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATa < 4:254573/149‑1 (MQ=255) gggTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTg > 5:327117/1‑149 (MQ=255) gggTATTGCTTTGGCCCTGTTTCGCGGCCTACTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTg < 8:144076/149‑1 (MQ=255) gTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGc > 8:53555/1‑149 (MQ=255) ttGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTc < 8:186647/149‑1 (MQ=255) gCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCg < 7:53555/148‑1 (MQ=255) gCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCt < 6:327117/149‑1 (MQ=255) gCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCt > 7:2517/1‑149 (MQ=255) tCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCg < 3:46037/114‑1 (MQ=255) tCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCg > 4:46037/1‑114 (MQ=255) cgcgGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGc < 8:2517/148‑1 (MQ=255) cgGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCgg > 8:284674/1‑132 (MQ=255) cgGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCgg < 7:284674/132‑1 (MQ=255) gCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAggg < 6:118416/149‑1 (MQ=255) ccTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAgggg > 2:345658/1‑149 (MQ=255) cTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTcgc > 1:241027/1‑149 (MQ=255) gCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTg < 4:273072/149‑1 (MQ=255) cAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTgg > 2:362226/1‑149 (MQ=255) aGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGc > 1:358627/1‑149 (MQ=255) gggTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCgg > 5:2240/1‑143 (MQ=255) gggTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCgg < 6:2240/143‑1 (MQ=255) tttCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCGGTGTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCa > 1:298765/1‑149 (MQ=255) ggCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTg < 4:365125/148‑1 (MQ=255) gCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGAt > 5:154273/1‑149 (MQ=255) gCTTCCTCAAGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGTCGGCCCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGAGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTAGCGGGTGGCCACCTTGa > 1:284698/1‑149 (MQ=255) cTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTcc < 3:79130/148‑1 (MQ=255) cTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCg > 2:13365/1‑149 (MQ=255) tCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGTCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCCTGATGTCCGc > 5:256340/1‑149 (MQ=255) tCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGc > 3:208415/1‑149 (MQ=255) cACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGa < 8:89274/118‑1 (MQ=255) cACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGa > 7:89274/1‑118 (MQ=255) cACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGc > 1:163003/1‑148 (MQ=255) ttCGGCCTGGGGGCTGTCGGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGAGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGc < 2:290594/149‑1 (MQ=255) gCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGAc > 3:120498/1‑149 (MQ=255) gCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGC‑G‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTg > 7:233434/1‑106 (MQ=255) gCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGC‑G‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTg < 8:233434/106‑1 (MQ=255) gCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCtt > 6:206706/1‑149 (MQ=255) tCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCt < 8:184357/149‑1 (MQ=255) cGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTg > 4:50473/1‑148 (MQ=255) ggCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTa < 2:298765/149‑1 (MQ=255) ccTTGGCCGCCTGCTGGTGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAg > 1:78733/2‑149 (MQ=255) cTTGGCCGCCTGCTGGTGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAGc > 3:315389/1‑149 (MQ=255) ccaccaGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAGCCCAgg > 4:164361/1‑149 (MQ=255) ccaGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAGCCCAGGTCg < 1:362226/149‑1 (MQ=255) agGCGG‑CCAAGGCGCG‑‑CTTGGGTGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAGCCCAGGTCGGCCAg > 4:265014/1‑149 (MQ=255) | GGGGAAACTCTGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGG‑CCAAGGCGCG‑‑CTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAGCCCAGGTCGGCCAG > NC_002947/1469675‑1469962 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |