| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,503,127 | T→G | 7.4% | intergenic (‑188/‑71) | tas ← / → rplM | NAD(P)‑linked reductase/50S ribosomal protein L13 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,503,127 | 0 | T | G | 7.4% | 289.5 / 7.3 | 93 | intergenic (‑188/‑71) | tas/rplM | NAD(P)‑linked reductase/50S ribosomal protein L13 |
| Reads supporting (aligned to +/- strand): ref base T (45/41); new base G (4/3); total (49/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01 | |||||||||||
GTTGAAATTTTTCGCGCAATCTGGATAATTCAGCCCCTCTCCGCGTGGCGGAAGTGATGCACCATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAAAGCGCGAGTGGTTCGTAGTCGACGCCGCTGGCCAGACCCTG > NC_002947/1502980‑1503272 | gTTGAAATTTTTCGCGCAATCTGGATAATTCAGCCCCTCTCCGCGTGGCGGAAGTGATGCACCATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTg < 2:142839/149‑1 (MQ=255)gTTGAAATTTTTCGCGCAATCTGGATAATTCAGCCCCTCTCCGCGTGGCGGAAGTGATGCACCATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTg > 2:72106/1‑149 (MQ=255) gAAATTTTTCGCGCAATCTGGATAATTCAGCCCCTCTCCGCGTGGCGGAAGTGATGCACCATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGc > 3:175915/1‑148 (MQ=255) tttttCGCGCAATCTGGATAATTCAGCCCCTCTCCGCGTGGCGGAAGTGATGCACCATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCACCAAAAGAGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCt > 6:30873/1‑149 (MQ=255) ttCGCGCAATCTGGATAATTCAGCCCCTCTCCGCGTGGCGGAAGTGATGCACCATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCAAGGGCAAGcgcg < 8:31035/148‑4 (MQ=255) cAATCTGGATAATTCAGCCCCTCTCCGCGTGGCGGAAGTGATGCACCATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTAt < 2:252760/149‑1 (MQ=255) aaTCTGGATAATTCAGCCCCTCTCCGCGTGGCGGAAGTGATGCACCATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATc < 5:319502/149‑1 (MQ=255) tGGATAATTCAGCCCCTCTCCGCGTGGCGGAAGTGATGCACCATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAG‑CCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGt > 2:156375/1‑148 (MQ=255) gATAATTCAGCCCCTCTCCGCGTGGCGGAAGTGATGCACCATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCa < 2:119081/145‑1 (MQ=255) gATAATTCAGCCCCTCTCCGCGTGGCGGAAGTGATGCACCATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGt > 5:297193/1‑147 (MQ=255) aaTTCAGCCCCTCTCCGCGTGGCGGAAGTGATGCACCATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGAt > 5:12463/1‑149 (MQ=255) ttCAGCCCCTCTCCGCGTGGCGGAAGTGATGCACCATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTc > 8:171057/1‑149 (MQ=255) tCAGCCCCTCTCCGCGTGGCGGAAGTGAAGCACCATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGc < 4:12380/122‑1 (MQ=255) tCAGCCCCTCTCCGCGTGGCGGAAGTGAAGCACCATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGc > 3:12380/1‑122 (MQ=255) aGCCCCTCTCCGCGTGGCGGAAGTGATGCACCCTCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCAGACCCGCGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGcc < 6:283208/149‑1 (MQ=255) cccTCTCCGCGTGGCGGAAGTGATGCACCATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGCCCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCCAGCTGTGCACTATCCAGTAAGATTCGCCGTc > 4:56287/1‑149 (MQ=255) cccTCTCCGCCTGGCGGAAGTGATGCACCATCACGCAGGAAGAACCCAGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAACCGTCTCTGTTCGGCTCCGCGCTTGCCCTTGGCAACCTGTGCACTATCCACTAAGATTCGCCGt > 8:82848/1‑148 (MQ=255) ctctCCGCGTGGCGGAAGTGATGCACCATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTa > 1:26345/1‑149 (MQ=255) ctcCGCGTGGCGGAAGTGATGCACCATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTAtt > 2:304759/1‑149 (MQ=255) cgcgTGGCGGAAGTGATGCTCCATGACTCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACGCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTTGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTAttttt < 6:12463/149‑1 (MQ=255) cgcgTGGCGGAAGTGATGCACCATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTAttttt > 1:90150/1‑149 (MQ=255) cgcgTGGCGGAAGTGATGCACCATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTAttttt > 7:335507/1‑149 (MQ=255) cgcgTGGCGGAAGTGATGCACCATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTAtt < 4:175915/146‑1 (MQ=255) gCACCATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATc < 4:89662/108‑1 (MQ=255) gCACCATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATc > 3:89662/1‑108 (MQ=255) aCCATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAgg > 6:4451/1‑149 (MQ=255) cATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCt > 2:62141/1‑149 (MQ=255) cATAACGAAGGAAGAAACCCGTCGAAAATTGGCGTGCACGACCCGTGACCCCAAAAGCGTCTGTTTTCGGCTGCGCGCTTTCACTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGTTTGGGCGCCTCAGAGGCt > 2:133072/1‑149 (MQ=255) aTCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCtt > 2:70611/1‑149 (MQ=255) aTCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCtt > 8:230515/1‑149 (MQ=255) aCGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGGCCCCAAAAGCGTCTGTTTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTa < 7:82848/148‑1 (MQ=255) aCGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGggc > 7:328294/1‑132 (MQ=255) aCGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGggc < 8:328294/132‑1 (MQ=255) aCGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTag < 7:230515/149‑1 (MQ=255) aCGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTa < 1:304759/148‑1 (MQ=255) cGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTa > 2:347540/1‑147 (MQ=255) gCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTa > 6:77817/1‑146 (MQ=255) aGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGaa < 8:39279/149‑1 (MQ=255) agaaCCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGaa < 5:30873/149‑1 (MQ=255) aCCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAAc > 6:19348/1‑149 (MQ=255) ccccGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACt < 5:77817/149‑1 (MQ=255) ccccGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACt > 1:110336/1‑149 (MQ=255) cccGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTGTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACtt > 2:188155/1‑149 (MQ=255) cccGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGGCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACtt < 3:331997/149‑1 (MQ=255) ccGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACttt > 3:317702/1‑149 (MQ=255) cGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTCTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACtttt < 1:188155/149‑1 (MQ=255) gTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTa < 1:72106/149‑1 (MQ=255) cATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAg < 7:231282/120‑1 (MQ=255) cATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAg > 8:231282/1‑120 (MQ=255) ggCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAAc < 5:19348/148‑1 (MQ=255) gCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAAc > 6:42438/1‑133 (MQ=255) gCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAAc < 5:42438/133‑1 (MQ=255) gTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGa < 8:335507/149‑1 (MQ=255) gCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGGTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGaaa < 6:86121/149‑1 (MQ=255) gCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTGCTGCTAAACCGGaaa < 2:110336/149‑1 (MQ=255) cccgacccgcGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGGAAGCTGTGCACGATCCAGTAAGATTCGCCGTCAAGTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGCATGACAACGTTTACTGCTAAACCGGaaca > 1:285690/1‑147 (MQ=255) cccgacccgaGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGaaa < 1:62141/148‑1 (MQ=255) cccgacccgaGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGaaa < 1:347540/148‑1 (MQ=255) cccgacccgaGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGaaa > 6:151286/1‑148 (MQ=255) cccgacccgaGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGAGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGaaa > 6:199219/1‑148 (MQ=255) ccgacccgaGCCCCTAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACa < 3:165202/149‑1 (MQ=255) ccgacccgaGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGGCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCTTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACa < 7:171057/149‑1 (MQ=255) ccgacccgaGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCgg > 1:110603/1‑144 (MQ=255) ccgacccgaGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCgg < 2:110603/144‑1 (MQ=255) ccgaGCCCCCAACAGCGTGTGGGTTCGGCTGCGCGCGTGCCCTTGGCAAGCTGTGCACTATCCAGTCATATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGCTAATGAAAACTTTTACTGCTAAACCGGAACCAGTaaa < 2:285690/149‑1 (MQ=255) gCCCCCAAAAGCGGCTGTGTTCGGCTGCGCGCATGCCCTTGGCAAGCTGGGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCGGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAAAgcgc < 2:26345/149‑1 (MQ=255) cgcctaaaGCGTCTGGGTTCGGCTGCGCGATTGCCCTTGGCATGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGATAACTTTTACTGCTAAACCGGAAACATTAAATCGCGa < 4:17962/144‑1 (MQ=255) ccccAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAAAGCGCGa < 3:163211/149‑1 (MQ=255) cccAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAAAGCGCGAg > 6:122975/1‑149 (MQ=255) cAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAAAGCGCGAGTg > 8:38404/1‑149 (MQ=255) aaGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAAAGCGCGAGTGGt > 4:288960/1‑148 (MQ=255) tCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAAAGCGCGAGTGGTTCGTAg < 6:297193/149‑1 (MQ=255) tgtgTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTaga > 5:28412/1‑93 (MQ=255) tgtgTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTaga < 6:28412/93‑1 (MQ=255) tgtTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAAAGCGCGAGTGGTTCGTAGTCg < 5:4451/148‑1 (MQ=255) tGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAAAGCGCGAGTGGTTCGTAGTCGACGCCGCTg > 1:141747/1‑149 (MQ=255) acagcTTGCCAAGGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAAAGCGCGAGTGGTTCGTa < 5:350721/131‑1 (MQ=255) acagcTTGCCAAGGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAAAGCGCGAGTGGTTCGTa > 6:350721/4‑134 (MQ=255) acagcTTGCCAAGGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAAAGCGCGAGTGGTTCGTAGTc > 4:137151/4‑137 (MQ=255) acagcTTGCCAAGGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAAAGCGCGAGTGGTTCGTAGTc < 3:137151/134‑1 (MQ=255) acagcTTGCCAAGGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAAAGCGCGAGTGGTTCGTAGTCGACGCCGCTGGc > 2:309104/4‑149 (MQ=255) cgcTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAAAGCGCGAGTGGTTCGTAGTCGACGCCGCTGGCCa < 1:156375/149‑1 (MQ=255) agcTTGCCAAGGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAACGCGCGAGTGGTTCGTAGTCGACGCCGCTGGc > 2:140598/2‑147 (MQ=255) gcTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAAAGCGCGAGTGGTTCGTAGTCGACGCCGCTGGCCAg > 1:175378/1‑149 (MQ=255) ttGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAAAGCGCGAGTGGTTCGTAGTCGACGCCGCTGGCCAGAc > 5:130176/1‑149 (MQ=255) ttGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAAAGCGCGAGTGGTTCGTAGTCGACGCCGCTGGCCAGAc > 5:203567/1‑149 (MQ=255) gCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGaa > 4:364591/1‑103 (MQ=255) cccTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAAAGCGCGAGTGGTTCGTAGTCGACGCCGCTGGCCAGACCCt < 1:70611/149‑1 (MQ=255) ccTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAAAGCGCGAGTGGTTCGTAGTCGAcgccg > 3:121589/1‑135 (MQ=255) ccTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAAAGCGCGAGTGGTTCGTAGTCGAcgccg < 4:121589/135‑1 (MQ=255) ccTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAAAGCGCGAGTGGTTCGTAGTCGACGCCGCTGGCCAGACCCTg < 2:90150/149‑1 (MQ=255) ccTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAAAGCGCGAGTGGTTCGTAGTCGACGCCGCTGGCCAGACCCTg > 7:89833/1‑149 (MQ=255) ccTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAAAGCGCGAGTGGTTCGTAGTCGACGCCGCTGGCCAGACCCTg > 5:359291/1‑149 (MQ=255) | GTTGAAATTTTTCGCGCAATCTGGATAATTCAGCCCCTCTCCGCGTGGCGGAAGTGATGCACCATCACGCAGGAAGAACCCCGTCGAACATTGGCGTGCCCGACCCGAGCCCCCAAAAGCGTCTGTGTTCGGCTGCGCGCTTGCCCTTGGCAAGCTGTGCACTATCCAGTAAGATTCGCCGTCTATTTTTCGCTGGGCGGCCTCTGAGGCTTTAGAGAATGAAAACTTTTACTGCTAAACCGGAAACAGTAAAGCGCGAGTGGTTCGTAGTCGACGCCGCTGGCCAGACCCTG > NC_002947/1502980‑1503272 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |