| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,551,282 | G→T | 8.6% | intergenic (+41/+85) | groL → / ← pykA | chaperonin GroEL/pyruvate kinase II |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,551,282 | 0 | G | T | 8.6% | 222.9 / 9.7 | 80 | intergenic (+41/+85) | groL/pykA | chaperonin GroEL/pyruvate kinase II |
| Reads supporting (aligned to +/- strand): ref base G (38/35); new base T (4/3); total (42/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.18e-01 | |||||||||||
TGATGATCACCACCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGG > NC_002947/1551138‑1551430 | tgatgtTCACCTCCGTAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGTCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTctcgc < 3:269537/148‑2 (MQ=255)tgatgaTCACCACCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTcgc < 1:18528/146‑1 (MQ=255)tgatgaTCACCACCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTcgc > 2:18528/1‑146 (MQ=255)tgatgaTCACCACCGAAGCCATGGTTGACGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCA‑CGCTTagc > 8:170605/1‑146 (MQ=255) tCACCACCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCgg < 1:204417/149‑1 (MQ=255) tCACCACCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCgg < 6:58812/149‑1 (MQ=255) accgccGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCTCGCGAACCgggg > 4:265008/1‑149 (MQ=255) accGAAGCCATGGTTACCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCtt < 6:178295/149‑1 (MQ=255) ccGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCttt > 6:272145/1‑149 (MQ=255) cGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCTCGCGAACCGGGGCtttt < 8:15437/149‑1 (MQ=255) aGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCTCGCGAACCGGGGCtttttga < 3:265008/149‑3 (MQ=255) aTGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCACGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑Tg < 1:222938/149‑1 (MQ=255) aTGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑AGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGc < 7:95977/149‑1 (MQ=255) gCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCgg > 2:198508/1‑149 (MQ=255) gCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCg < 8:46591/148‑1 (MQ=255) ccGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCggg > 3:171035/1‑149 (MQ=255) gACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGGTTTTTTAT‑‑TGCTGTCGGGGc < 3:282596/149‑1 (MQ=255) gACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCtttt < 2:248033/133‑1 (MQ=255) gACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGAGGTAAGCCAGCCTTACCCCCCTGCACCATCAAAGAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGc < 5:332047/149‑1 (MQ=255) gACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATAAGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCtttt > 1:248033/1‑133 (MQ=255) cTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCctc > 1:149149/1‑149 (MQ=255) ccGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGTATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCtt < 7:181067/148‑1 (MQ=255) ggAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCg > 3:77835/1‑148 (MQ=255) gAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCtt < 3:253737/122‑1 (MQ=255) gAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCtt > 4:253737/1‑122 (MQ=255) gACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCAAGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCgcagca > 5:292673/1‑149 (MQ=255) aaGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGcac > 3:216461/1‑147 (MQ=255) aaGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGcac > 5:188242/1‑147 (MQ=255) aaGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGcac > 1:267873/1‑147 (MQ=255) gCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAgg > 5:223438/1‑149 (MQ=255) cAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCt > 2:128692/1‑149 (MQ=255) aGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCAAGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTg < 6:292673/149‑1 (MQ=255) tgctgGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTgcgc > 3:241311/1‑149 (MQ=255) ctgGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTgcgc < 7:170605/147‑1 (MQ=255) tGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCCGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑CGCTGTCGGGGCCTCTTCGCAGCACAAGGCTCCGCTTGAGCCt > 8:83630/1‑149 (MQ=255) ccTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAgg < 4:81956/133‑1 (MQ=255) ccTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTtg < 8:48571/149‑1 (MQ=255) tGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTtgtg > 2:13200/1‑149 (MQ=255) atatGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTtgtg < 4:241311/147‑1 (MQ=255) tatGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATAAAAAAGCCC‑CCGTTCGCGAGAACCCGGGCTTTTTTAT‑‑TTCTGTCGGGGCCTATTAGCCGCACAAGGCTg > 2:32209/1‑131 (MQ=255) atgggtggcatgggtggcATGGGCGGAATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGGGAGAACCGGGGGTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACTAGGCTGGGCTTGAGGGTTGTGCtgt > 1:195992/1‑149 (MQ=255) tggcatgggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAAc < 4:331965/149‑1 (MQ=255) tggcatgggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAAc > 5:299218/1‑149 (MQ=255) atgggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGt > 5:317613/1‑149 (MQ=255) atgggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGt > 3:106706/1‑149 (MQ=255) tgggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTg > 6:112946/1‑149 (MQ=255) ggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGa < 1:198508/149‑1 (MQ=255) gcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCa < 7:92014/148‑1 (MQ=255) atgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCaa < 8:200357/147‑1 (MQ=255) atgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCaa > 7:200357/1‑147 (MQ=255) atgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAAcc > 8:328885/1‑149 (MQ=255) gcggcATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGAcc < 1:13200/149‑1 (MQ=255) gcATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGc < 4:77835/149‑1 (MQ=255) gcATGATCAAAGCCAGCCTTACCCCCCTGCACCATCAAAAACCCC‑CGGTTCGCGACAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCAGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGc < 2:195992/149‑1 (MQ=255) atgatgTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCg > 8:133885/1‑148 (MQ=255) tgatgTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGa < 6:188242/149‑1 (MQ=255) gatgTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGAt > 1:149731/1‑149 (MQ=255) tgTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCa < 5:108030/149‑1 (MQ=255) tAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCAcc > 1:74386/1‑149 (MQ=255) tAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCAc < 7:328885/148‑1 (MQ=255) aaGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCAcc < 4:106706/148‑1 (MQ=255) aaGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCg > 3:167258/1‑149 (MQ=255) gccagccTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGAc > 2:12431/1‑149 (MQ=255) ccTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGt > 5:196360/1‑117 (MQ=255) ccTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGt < 6:196360/117‑1 (MQ=255) cccTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGCGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACTAGTGGATCAAACGACCATCGGATCACCGACGTGCAGGATAtt > 7:351654/1‑148 (MQ=255) cTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCAt < 6:299218/149‑1 (MQ=255) tCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTgg > 3:94723/1‑149 (MQ=255) aaaaGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGc < 5:112946/149‑1 (MQ=255) aaaaGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGc > 2:239735/1‑149 (MQ=255) aaaGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGcc < 5:207155/149‑1 (MQ=255) aGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCAc > 6:245542/1‑149 (MQ=255) gCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCAcc < 4:171035/149‑1 (MQ=255) ccc‑cGGTTCTCGCGAACCGGGGCTTTTTGATGGTGCAG‑GGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGt > 6:257365/1‑143 (MQ=37) ccc‑cGGTTCTCGCGAACCGGGGCTTTTTGATGGTGCAG‑GGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGt < 5:257365/143‑1 (MQ=37) ccc‑cGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCAt < 5:283201/133‑1 (MQ=255) ccc‑cGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCAt > 6:283201/1‑133 (MQ=255) ccc‑cGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCg > 2:245172/1‑149 (MQ=255) cc‑cGTTTCTCGCGAACCGGGGCTTTTTGA‑‑‑TGGTGCAGAGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGAt > 1:67278/1‑149 (MQ=255) cc‑cGGTTCTCGCGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGa > 5:301503/1‑149 (MQ=255) cc‑cGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGa > 2:315684/1‑149 (MQ=255) cGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATg > 4:277185/1‑149 (MQ=255) gTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGgt < 5:272145/149‑1 (MQ=255) ttCGCGTTATCCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATCGGTGGCACCAATggca < 1:128692/149‑3 (MQ=255) cgcgAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATCGGTGGCACCAATggcat < 6:317613/148‑4 (MQ=255) gcgAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTgg > 2:143074/1‑149 (MQ=255) | TGATGATCACCACCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCC‑CGGTTCGCGAGAACCGGGGCTTTTTTAT‑‑TGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGG > NC_002947/1551138‑1551430 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |