| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,599,859 | C→T | 5.6% | R442H (CGC→CAC) | bglX ← | beta‑D‑glucoside glucohydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,599,859 | 0 | C | T | 5.6% | 217.1 / 2.2 | 71 | R442H (CGC→CAC) | bglX | beta‑D‑glucoside glucohydrolase |
| Reads supporting (aligned to +/- strand): ref base C (33/34); new base T (2/2); total (35/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCGATCAGCACCGCAGGCGGGCGTGGGTCGTCGACGATTTCCGGGGCATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCCAG > NC_002947/1599712‑1600007 | tCGATCAGCACCGCAGGCGGGCGTGGGTCGTCGACGATTTCCGGGGCATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCAcggcgcggcg > 4:138666/1‑149 (MQ=255)tCGATCAGCACCGCAGGCGGGCGTGGGTCGTCGACGATTTCC‑GGGCATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCAcggcgcggcg > 1:151002/1‑148 (MQ=255) aTCAGCACCGCAGGCGGGCGTGGGTCGTCGACGATTTCCGGGGCATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACggcgcggcgc > 6:263671/1‑147 (MQ=255) gCACCGCAGGCGGGCGTGGGTCGTCGACGATTTCCGGGGCATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCt > 5:257329/1‑149 (MQ=255) gCACCGCAGGCGGGCGTGGGTCGTCGACGAGTTCCGGGGCATCGAAGTTGAGGAAGTTCAGGTAATCGAGGATCGCCTTGTCGGCCGTGAGGTTGGAGCCTGTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGGAGGCCt > 4:336751/1‑149 (MQ=255) cACCGCAGGCGGGCGTGGGTCGTCGACGATTTCCGGGGCATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCtt > 4:257123/1‑149 (MQ=255) aCCGCAGGCGGGCGTGGGTCGTCGACGATTTCCGGGGCATCGAAGTTGAGGAAGTTCAGGAAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTc < 5:266868/149‑1 (MQ=255) cGCAGGCGGGCGTGGGTCGTCGACGATTTCCGGGGCATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTcgc < 6:4543/149‑1 (MQ=255) cAGGCTGGCTTTGGTATTCGACGATTTACGGGGCATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATAGCCTTGTCGACCGTGACGTTGTAGCCTTTTTAGTAGACCAGCTTGGCATTTCCTTCCACTGCGCGTCTCAAGCCTTcgcg > 2:313443/1‑148 (MQ=255) cAGGCGGGCGTGGGTCGTCGACAATTTCCGGGGCATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCTTGACGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCgcgc < 8:67819/149‑1 (MQ=255) ggcgggcgTGGGTCGTCGACGATTTCCGGGGCATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCAc < 3:121995/149‑1 (MQ=255) gcgggcgTGGGTCGTCGACGATTTCCGGGGCATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACg < 5:87621/149‑1 (MQ=255) gcgggcgTGGGTCGTCGACGATTTCCGGGGCATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACg < 5:93810/149‑1 (MQ=255) gcgggcgTGGGTCGTCGACGATTTCCGGGGCATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACg < 1:45666/149‑1 (MQ=255) gggcgtcgACGATTTCCGGGGCATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGa < 4:126017/145‑1 (MQ=255) gtcgtcGACGATTTCCGGGGCATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGt < 7:138055/149‑1 (MQ=255) gtcgtcGACGATTTCCGGGGCATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGt < 4:149218/149‑1 (MQ=255) tcgtcgACGATTTCCGGGGCATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTg < 1:260620/149‑1 (MQ=255) gacgaTTTCCGGGGCATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACgg < 4:318718/149‑1 (MQ=255) gacgaTGTCCGGGGCATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCATGTCGCCCGGGACGTTGGAGCCTTTGGCGTAGACCAGCATGGCGATGCCTGCCACGGCGCGCCGCACGCCGTCGCGCACGCTCACCGCGAGGCCgg > 8:301836/1‑149 (MQ=255) tttCCGGTGCATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTa < 1:313443/149‑1 (MQ=255) ttCCGGGGCATCGAAGTTGAGGAAGTTCAGGTAATTGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTa < 1:281097/148‑1 (MQ=255) ttCCGGGGCATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACg > 1:343197/1‑127 (MQ=255) ttCCGGGGCATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACg < 2:343197/127‑1 (MQ=255) ggggCATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTc < 5:18289/149‑1 (MQ=255) gggCATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTcg > 8:98078/1‑149 (MQ=255) aGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGc < 5:166858/148‑1 (MQ=255) ggAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGccc < 3:336751/149‑1 (MQ=255) gAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGccc > 4:42126/1‑148 (MQ=255) gAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCca < 2:239275/149‑1 (MQ=255) gTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCcatc > 7:296280/1‑148 (MQ=255) gTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCGTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCcatc < 8:296280/148‑1 (MQ=255) cAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATg < 6:257329/148‑1 (MQ=255) aGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGt < 3:42126/148‑1 (MQ=255) aGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGt < 2:8716/148‑1 (MQ=255) aGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTc > 2:217499/1‑149 (MQ=255) tAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGt < 6:10263/114‑1 (MQ=255) tAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGt > 5:10263/1‑114 (MQ=255) gAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGa < 2:228321/148‑1 (MQ=255) aaGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGTGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCCGCTGGCGATCATGTGGATCGGGGc > 4:191727/1‑149 (MQ=255) aaGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAg > 2:255953/1‑148 (MQ=255) aaGATCGCCTTGTCGCCCGGGACGGTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGTGCAAGCCGTCGCGCACGGGCCCCGAGTGGACGGGGTTCCCGTCGGCGGCCCCGCGGCCCATCATGTCGCTCggggg > 4:196672/1‑146 (MQ=255) aTCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATc > 6:327507/1‑149 (MQ=255) gTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAg < 7:98078/147‑1 (MQ=255) tCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGTGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCg < 3:196672/148‑1 (MQ=255) tCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGTGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCg < 3:191727/148‑1 (MQ=255) gCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGTCGGCCCAGCACCCCATCATGTCGAACCGAGCAAAGGCCAGCCGGc > 2:263356/1‑149 (MQ=255) cGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGa > 3:94758/1‑149 (MQ=255) gTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCCGCTGGCCGat < 2:151002/149‑2 (MQ=255) ttGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAgg > 7:325772/1‑148 (MQ=255) ttGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAgg > 8:149304/1‑148 (MQ=255) aGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATGGGCGCATAGGCCAGCGGGCCGACCAAGGCAATg > 4:44264/1‑149 (MQ=255) aGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATg < 3:138666/149‑1 (MQ=255) tttGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGc > 5:340475/1‑149 (MQ=255) ggCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGGCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCg < 5:263671/148‑1 (MQ=255) gTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGTGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCt > 1:108406/1‑149 (MQ=255) gTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCCTCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCt > 7:287398/1‑149 (MQ=255) gTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCt > 2:275114/1‑149 (MQ=255) gTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATACGCCAGCGGGCCGACCAACGCAATGGTGCCgggcg > 8:305772/1‑146 (MQ=255) gACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCtttt > 3:319113/1‑149 (MQ=255) gACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCtttt < 3:91553/149‑1 (MQ=255) aCCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGAGCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCttttt < 2:219087/149‑1 (MQ=255) aCCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCCGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCttt < 3:158080/147‑1 (MQ=255) aCCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCCGCACAAAATGTCGATCGGAGCAACCGCCAGCCGGCCGACCAACGCAAAGGTGGCCGCCgtt > 4:158080/1‑147 (MQ=255) cAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCCGCATGTCGAGCGGAGCATCGGCCCGCGGGCCGCCCCCGGCAATGGTGCCGGCCGTTTTcc > 6:293812/1‑148 (MQ=255) cTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTGAGCg > 5:212003/1‑149 (MQ=255) cTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCg > 3:202065/1‑149 (MQ=255) gccttCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCt > 8:6369/1‑149 (MQ=255) ccttCCACGGCGCGGCGCATGCCTTCGGGCACGGTGACGGCGTGGACGGGTTTACGGTCGGCGGCCCAGCTGCCCTTGATGTCGATCGGAGCAGCGGCCTGCGGGGCGTCCATGGCTTTGGTGCGGGCCTTTTTCAGCGGCAGGGTCTg < 7:301836/149‑1 (MQ=255) ccttCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGCGCATCGGCCAGCGGGCCGCCCAAGGCAATGGTGCCGGCCGTTTTCCGCGGCAGGGTcgg > 8:194919/1‑147 (MQ=255) cttCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTgg < 1:255953/149‑1 (MQ=255) ttCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGt > 3:29942/1‑149 (MQ=255) ttCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCAGGCCATCATGTCGATCGGAGCATCCGCCCGCGGGCCGACCAAGGCAATGGTGCCGGCCGTTTTAAGCGGCAGGGTGTggg > 8:126290/1‑148 (MQ=255) cACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGCTCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGc > 4:250556/1‑149 (MQ=255) gcgcggcgcATGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCa < 7:355441/127‑1 (MQ=255) gcgcggcgcAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCTGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGtt < 3:129275/149‑1 (MQ=255) gcgcggcgcAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCGGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGtt > 4:129275/1‑149 (MQ=255) cggcgcAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTc < 1:217499/149‑1 (MQ=255) gcgcAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGGTTTc > 7:348146/1‑147 (MQ=255) cgcAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCcag < 6:340475/149‑1 (MQ=255) cgcAAGCCTTCGCGCACGGGCACCGAGTGGACGGGATTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCcac < 7:179143/149‑2 (MQ=255) | TCGATCAGCACCGCAGGCGGGCGTGGGTCGTCGACGATTTCCGGGGCATCGAAGTTGAGGAAGTTCAGGTAATCGAAGATCGCCTTGTCGCCCGTGACGTTGGAGCCTTTGGCGTAGACCAGCTTGGCCTTGCCTTCCACGGCGCGGCGCAAGCCTTCGCGCACGGTCACCGAGTGGACGGGTTTACCGTCGGCGGCCCAGCTGCCCATCATGTCGATCGGAGCATCGGCCAGCGGGCCGACCAAGGCAATGGTGCCGGCCTTTTTCAGCGGCAGGGTCTGGTTGCGGTTTTCCAG > NC_002947/1599712‑1600007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |