| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,608,463 | T→C | 5.5% | D36G (GAC→GGC) ‡ | rsuA ← | 16S rRNA pseudouridine(516) synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,608,463 | 0 | T | C | 5.5% | 220.8 / 2.4 | 74 | D36G (GAC→GGC) ‡ | rsuA | 16S rRNA pseudouridine(516) synthase |
| Reads supporting (aligned to +/- strand): ref base T (35/34); new base C (2/2); total (37/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.64e-01 | |||||||||||
GAGAACGGTACGGTGTTGCGGATCGTGGGTGGCGCTTACGCAGCCAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAGGAAACGGTCAAGGCGCATGGCAACGATCAGTGGGCAGCGGATGGACGGAGCTGTTCTT > NC_002947/1608318‑1608609 | gagaACGGTACGGTGTTGCGGATCGTGGGTGGCGCTTACGCAGCCAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGc > 2:296018/1‑149 (MQ=255) agaACGGTACGGGGTTGCGGATCGTGGGTGGCGCTTACGCAGCCAGGGGGCTTGTACAGCATCAGGTAGCGGGCCGGTCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCt < 7:249615/149‑1 (MQ=255) acggtacggtGTTGCGGATCGTGGGTGGCGCTTACGCAGCCAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGACCCGCTGAc < 7:271546/149‑1 (MQ=255) acggtacggtGTTGCGGATCGTGGGTGGCGCTTACGCAGCCAGTGGGCTTGTACAGCATCACGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCGGAATTCACGCACGTCGGTCAGCGACCCGCTGAc < 8:188661/149‑1 (MQ=255) cggtGTTGCGGATCGTGGGTGGCGCTTACGCAGCCAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCt < 3:248746/148‑1 (MQ=255) ggtGTTGCGGATCGTGGGTGGCGCTTACGCAGCCAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTgg < 3:260950/149‑1 (MQ=255) ggtGTTGCGGATCGTGGGTGGCGCTTACGCAGCCAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTgg > 2:124729/1‑149 (MQ=255) tgtTGCGGATCGTGGGTGGCGCTTACGCAGCCAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGc > 7:100245/1‑148 (MQ=255) gCGGATCGTGGGTGGCGCTTACGCAGCCAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATc < 3:188995/148‑1 (MQ=255) cGGATCGTGGGTGGCGCTTACGCAGCCAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATcc < 7:50390/148‑1 (MQ=255) aTCGTGGGTGGCGCTTACGCAGCCAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTc < 2:200761/149‑1 (MQ=255) gtggCGCTTACGCAGCCAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCAcgcg > 7:39784/1‑149 (MQ=255) tggCGCTTACGCAGCCAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACgcgg > 5:76146/1‑149 (MQ=255) cTTACGCAGCCAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTg > 7:51646/1‑149 (MQ=255) ttACGCAGCCAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTgc > 5:59456/1‑149 (MQ=255) aCGCAGCCAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAACGGGTc > 4:69022/1‑110 (MQ=255) aCGCAGCCAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAACGGGTc < 3:69022/110‑1 (MQ=255) cGCAGCCAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGcc < 1:296018/149‑1 (MQ=255) cGCAGCCAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGcc < 3:341984/149‑1 (MQ=255) gCAGCCAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACgcggc < 2:18312/140‑1 (MQ=255) gCAGCCAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACgcggc > 1:18312/1‑140 (MQ=255) aGCCAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAg > 5:232261/1‑148 (MQ=255) aGCCAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAg > 7:180696/1‑148 (MQ=255) aGCCAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAg > 6:288896/1‑148 (MQ=255) cAGTGGTCTTGTCAAGGATCAGTTAGCGGTCCGGGCTGCCTGCCTTCAGGAGTTGCTCGTCCAGCTCTAGGCGGCTGAATTGACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATc < 8:232650/149‑1 (MQ=255) cAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCAt > 3:213732/1‑148 (MQ=255) cAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGGCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATc < 2:125794/149‑1 (MQ=255) cAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGGTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATc < 3:109271/149‑1 (MQ=255) tGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAgg < 6:76146/149‑1 (MQ=255) ggCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCg < 4:105474/149‑1 (MQ=255) gCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCg > 5:197940/1‑148 (MQ=255) ttGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAAc > 4:314106/1‑149 (MQ=255) gTACAGCATCAGGTAGCGGTCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACg < 4:126586/148‑1 (MQ=255) cATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGc > 1:350918/1‑149 (MQ=255) aGGTAGCGGGCCGGGGGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGGCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGtt < 1:136422/149‑1 (MQ=255) tgctgcaggccggccGCCCGGCCCGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGATCTGGCGGTTg > 6:152862/8‑149 (MQ=255) ggTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTg < 7:256259/149‑1 (MQ=255) ggTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTg > 6:327832/1‑149 (MQ=255) gTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGt < 8:100245/149‑1 (MQ=255) tAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTa < 4:302348/149‑1 (MQ=255) tAGCGGGCCGCGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTa < 8:298734/149‑1 (MQ=255) ccgggcGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCt < 7:136213/145‑1 (MQ=255) ccgggcGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCt > 8:136213/1‑145 (MQ=255) gggcGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAg < 8:51646/149‑1 (MQ=255) ggccggccTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTg > 7:177699/1‑149 (MQ=255) gccTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGGCGGTCAGCGGGTCGCTGACTACCTGGCCATCCCCTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAg < 5:298363/149‑1 (MQ=255) ccTGCAGCAGTTGCTCGTCCAGCTCTACGCGACTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAg > 8:162530/1‑148 (MQ=255) gcagcaGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAgg < 4:156732/146‑1 (MQ=255) gcagcaGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAgg > 3:156732/1‑146 (MQ=255) gcagcaGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAGGaaa > 5:255815/1‑149 (MQ=255) agcagTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAGGAAACg < 5:288896/149‑1 (MQ=255) agTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAGGAAACGGt > 4:5445/1‑148 (MQ=255) gTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAGGAAACGGTCAAGgcgc < 6:161874/148‑1 (MQ=255) tCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAGGAAACGGTCAAGGCGCAt < 6:232261/149‑1 (MQ=255) tCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAGGAAACGGTCAAGGCGCAt > 8:215895/1‑149 (MQ=255) gCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAGGAAACGGTCAAGGCGCATGGc > 7:308382/1‑148 (MQ=255) tctACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAGGAAACGGTCAAGGCGCATGGCAAc > 6:250440/1‑149 (MQ=255) tACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCATGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAGGAAACGGTCAAGGCGCATGGCAAc < 8:177699/147‑1 (MQ=255) tGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAGGAAACGGTCAAGGCGCATGGCAACGATCAGTggg > 1:151801/1‑149 (MQ=255) aTTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAgg < 4:93795/104‑1 (MQ=255) aTTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAgg > 3:93795/1‑104 (MQ=255) cacgcacgTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAGGAAACGGTCAAGGCGCATGGCAACGATCAGTGGGCAGCg < 6:59456/148‑1 (MQ=255) acgcgcgTCCGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGACCGCATCAGGCGAACGTTCTGGCGGTGGTAGCTGTGCAGGTTGGCGAGGAAACGGTCAAGGCGCATGGCAACGAGCAGTGGGCAGCTGa > 4:197717/1‑149 (MQ=255) acgcacgTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAGGAAACGGTCAAGGCGCATGGCAACGATCAGTGGGCAGCGGa > 1:85627/1‑149 (MQ=255) cgcacgTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAGGAAACGGTCAAGGCGCATGGCAACGATCAGTGGGCAGCGGAt < 1:124729/149‑1 (MQ=255) aggtagTCAGCGACCCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAGGAAACGGTCAAGGCGCATGGCAACGATCAGTGGGCAGCGGATGGAc > 5:67491/6‑149 (MQ=255) agTCAGCGACCCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAGGAAACGGTCAAGGCGCATGGCAACGATCAGTGGGCAGCGGATGGACGGAg > 7:57940/2‑149 (MQ=255) tCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAGGAAACGGTCAAGGCGCATGGCAACGATCAGTGGGCAGCGGATGGACGGAGCt > 3:330402/1‑149 (MQ=255) cAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAGGAAACGGTCAAGGCGCATGGCAACGATCAGTGGGCAGCGGATGGACGGAGCTg < 6:255815/149‑1 (MQ=255) gCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAGGAAACGGTCAAGGCGCATGGCAACGATCAGTGGGCAGCGGATGGACGGAGCTGtt > 2:80156/1‑149 (MQ=255) gggTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAGGAAACGGTCAAGGCGCATGGCAACGATCAGTGGGCAGCGGATGGACGGAGCTGttct < 4:213732/149‑1 (MQ=255) gggTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAGGAAACGGTCAAGGCGCATGGCAACGATCAGTGGGCAGCGGATGGACGGAGCTGttct > 3:138679/1‑149 (MQ=255) ggTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAGGAAACGGTCAAGGCGCATGGCAACGATCAGTGGGCAGCGGATGGACGGAGCTGttctt < 7:162530/149‑1 (MQ=255) gTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAGGAAACGGTCAAGGCGCATGGCAACGATCAGTGGGCAGCGGATGGACGGAGCTGttctt > 5:170040/1‑148 (MQ=255) | GAGAACGGTACGGTGTTGCGGATCGTGGGTGGCGCTTACGCAGCCAGTGGGCTTGTACAGCATCAGGTAGCGGGCCGGGCGGCCGGCCTGCAGCAGTTGCTCGTCCAGCTCTACGCGGCTGAATTCACGCACGTCGGTCAGCGGGTCGCTGACTACCTGGCCATCCACTCGCACGCGGCGTTGCGCCAGCATCAGGCGAACGTTCTGGCGGTTGTAGCTGGGCAGGTTGGCGAGGAAACGGTCAAGGCGCATGGCAACGATCAGTGGGCAGCGGATGGACGGAGCTGTTCTT > NC_002947/1608318‑1608609 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |