| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 181,812 | A→G | 8.6% | intergenic (+26/‑80) | PP_r01 → / → PP_5SB | 5S ribosomal RNA/5S ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 181,812 | 0 | A | G | 8.6% | 188.1 / 7.2 | 70 | intergenic (+26/‑80) | PP_r01/PP_5SB | 5S ribosomal RNA/5S ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base A (34/30); new base G (4/2); total (38/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.42e-01 | |||||||||||
TCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGAT > NC_002947/181668‑181954 | tCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAAGAGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATg > 1:294450/1‑148 (MQ=12) gacgacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTTTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGt < 5:296988/148‑1 (MQ=17) gacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATg < 3:69029/140‑1 (MQ=32) gacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATg > 4:69029/1‑140 (MQ=32) gacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAgg‑‑‑g < 8:167752/149‑1 (MQ=32) ccATAGAGCATGGTAACCACCTGATCCCATCACGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTTTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGt < 1:157070/149‑1 (MQ=255) agagCATTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTg < 2:251867/149‑1 (MQ=32) gCATTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCCGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTc < 1:284462/149‑1 (MQ=17) gCATTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCt < 2:110548/149‑1 (MQ=32) aTTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCtt > 6:56452/1‑148 (MQ=32) ttGGAACCACCTGATCCCATCCCGAACGCAGTAGTGAAA‑CGATGCATAGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCttt > 1:207257/1‑148 (MQ=17) ggAACCACCTGATCCCATCCCGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTaa < 6:91099/148‑1 (MQ=32) gAACCACCTGATCCCATCCCGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAg > 6:145563/1‑148 (MQ=32) aaCCACCTGATCCCATCCCGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTa < 7:261551/149‑1 (MQ=32) caccTGATCCCATCCCGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAgg > 4:214587/1‑148 (MQ=32) caccTGATCCCATCCCGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAgg > 5:163727/1‑148 (MQ=32) caccTGATCCCATCCCGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGa < 7:84101/149‑1 (MQ=33) accTGATCCCATCCCGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGaa < 7:2884/149‑1 (MQ=34) ccTGATCCCATCCCGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAAc > 1:195717/1‑149 (MQ=35) ccTGATCCCATCCCGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAAc > 5:6411/1‑149 (MQ=35) ccatcccGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACagag < 3:285928/149‑1 (MQ=40) ccatcccGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACa > 2:368911/1‑146 (MQ=38) ccatcccGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTACC‑TGCATGTGCAGATAgg‑‑‑g < 7:92421/121‑1 (MQ=255) ccatcccGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTACC‑TGCATGTGCAGATAgg‑‑‑g > 8:92421/1‑121 (MQ=255) catcccGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAg > 4:334/1‑137 (MQ=32) catcccGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAg < 3:334/137‑1 (MQ=32) cGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCg > 1:4969/1‑148 (MQ=255) gAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGTTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGTAACTACAGAGATTCGCa < 3:214587/149‑1 (MQ=255) tCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCa > 6:110062/1‑149 (MQ=255) tagtGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTc < 1:18424/149‑1 (MQ=255) agtGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTcc > 5:255513/1‑149 (MQ=255) aaa‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCa < 7:283958/140‑1 (MQ=255) aaa‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCa > 8:283958/1‑140 (MQ=255) aTGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACgg < 2:4969/149‑1 (MQ=255) aTGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACgg < 5:110062/149‑1 (MQ=255) cATCGCCGATGGTAGTGTGGGGTATCACCATGTGAGAGTACGTCAT‑CGTCAAGATTCATTTCGCAAAACCCATATC‑TGCACATGCAGGAAGG‑‑‑GGTTTTCTGTTTAAGTAg > 2:35657/1‑110 (MQ=11) aTCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCCCGTCCCTAGGACGTGcct < 6:6411/149‑2 (MQ=17) tCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAg > 2:19361/1‑149 (MQ=255) aTGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGcacaca < 5:45076/149‑1 (MQ=255) gTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGaa < 2:195717/149‑1 (MQ=255) gtgtGGGGTCTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAAtt < 5:230260/148‑1 (MQ=255) tgGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCt < 5:145563/148‑1 (MQ=255) gggTTTGCCCATGTGCCTTTAGGGCAT‑CGTCAACATTCATTTCCCAAAACCCCTTTCTTCCACATGCAGGTAGGCTCCCTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTc < 1:116707/149‑1 (MQ=255) ggTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTgac < 6:163727/149‑1 (MQ=255) ccATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCa > 4:113365/1‑147 (MQ=255) ccATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATa > 7:159040/1‑149 (MQ=255) agagTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCAtt < 2:207257/149‑1 (MQ=255) agagTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCAtt < 1:368911/149‑1 (MQ=255) agTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCa > 8:304841/1‑138 (MQ=255) agTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCa < 7:304841/138‑1 (MQ=255) gTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTgg < 6:255513/148‑1 (MQ=255) gTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGa < 5:56452/149‑1 (MQ=255) gTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGat > 6:257030/1‑149 (MQ=255) tCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGatc > 6:57026/1‑149 (MQ=255) tttCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGaa > 5:175730/1‑149 (MQ=255) tttCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGaa > 3:120857/1‑149 (MQ=255) tCGCAAAACCCCAATC‑TGCACATGCAGGTAGT‑‑‑GGATTTGCCGTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTATTGACGACCATAGAGCATTGGAACCTCCGGATCCCATCCCGAACt > 3:39365/1‑149 (MQ=37) agacAAAACCCCTACC‑TGCATGTGCAGATAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACt < 7:219585/146‑1 (MQ=37) agacAAAACCCCTACC‑TGCATGTGCAGATAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACt > 8:219585/4‑149 (MQ=37) gCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACt > 6:191077/1‑147 (MQ=255) aaaaCCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTcag > 3:97950/1‑148 (MQ=255) aaaCCCCAAAA‑TCCACATGCGGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAAGTACAGAGATACCCCGGCACGACCTAGGACCGGCCCAGCACACAGAATTTCTTGACGACCTTAACGCATTGTAACCACCTCATCCAAGCCCGaaagaccac > 2:107912/1‑142 (MQ=255) cccTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTg > 2:121374/1‑148 (MQ=255) cccTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTg > 7:260100/1‑148 (MQ=255) cccTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTg > 6:188622/1‑148 (MQ=255) cccTACC‑TGCATGTGCAGATAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTg > 3:211416/1‑148 (MQ=255) cccTACC‑TGCATGTGCAGATAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTg > 8:21918/1‑148 (MQ=255) caaTC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGaaa > 5:90275/3‑149 (MQ=255) cTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGaaa > 7:271746/1‑149 (MQ=255) cTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGaaa > 1:105929/1‑149 (MQ=255) cacaTGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGAt < 6:175730/146‑1 (MQ=255) | TCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAA‑CGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCAT‑CGTCAAGATTCATTTCGCAAAACCCCTATC‑TGCACATGCAGGTAGG‑‑‑GGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGAT > NC_002947/181668‑181954 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |