Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,812,302 G→C 8.1% A39G (GCC→GGC) ‡ PP_1615 ← LysR family transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,812,3020GC 8.1% 184.4 / 6.8 62A39G (GCC→GGC) ‡PP_1615LysR family transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base G (32/25);  new base C (2/3);  total (34/28)
Fisher's exact test for biased strand distribution p-value = 6.50e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.59e-02

CCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCATCGGCTGCTCATCGATTATCCCTGTGTGGCAATAATGTTTTGTC  >  NC_002947/1812156‑1812449
                                                                                                                                                     |                                                                                                                                                   
ccAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCg                                                                                                                                                   <  8:66157/149‑1 (MQ=255)
        cccATGGCGCGCAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCg                                                                                                                                           >  4:255843/1‑149 (MQ=255)
            tGGCGCGCAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGCAGATCGCCCGGCTg                                                                                                                                       <  3:111631/149‑1 (MQ=255)
             ggCGCGCAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGa                                                                                                                                      >  7:289894/1‑149 (MQ=255)
              gcgcgcAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TACAGGCGGTCCTCCAGCCGGCAGATCGCCCGGCTgga                                                                                                                                     <  2:39496/149‑3 (MQ=255)
               cgcgcAGCGCGTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGCAGATCGCCCGGCTggag                                                                                                                                    <  4:248544/149‑4 (MQ=255)
                gcgcAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCt                                                                                                                                        <  5:367244/144‑1 (MQ=255)
                gcgcAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCt                                                                                                                                        >  6:367244/1‑144 (MQ=255)
                       gcTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGGAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGAt                                                                                                                              >  6:277301/1‑147 (MQ=255)
                        cTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAg                                                                                                                           <  3:189622/149‑1 (MQ=255)
                            cTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTGGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCATGCGCGTTCTGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGa                                                                                                                         <  1:280001/148‑1 (MQ=255)
                               tcGGCCATCCTGCAAGCGTTGGCAATGC‑TGCATTAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGTGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCAAGCCGTGCGATCTGCCGGCTGATGTGCGATGATGAAAc                                                                                                                      <  1:161695/146‑1 (MQ=255)
                                   ccATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAg                                                                                                                >  7:316851/1‑149 (MQ=255)
                                    cttCCTGC‑AGCATTGCCAACGCTTGCAGGAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAgg                                                                                                               >  3:361747/3‑149 (MQ=255)
                                      tCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCg                                                                                                             >  2:217694/1‑149 (MQ=255)
                                       ccTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGt                                                                                                            >  7:292052/1‑149 (MQ=255)
                                           cAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTcgg                                                                                                        >  2:144457/1‑149 (MQ=255)
                                           cAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTcgg                                                                                                        <  5:37813/149‑1 (MQ=255)
                                                    gCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCa                                                                                                <  7:271731/148‑1 (MQ=255)
                                                         gc‑tgcAGGAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGAGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAAc                                                                                          >  2:40245/1‑149 (MQ=255)
                                                            tgcAGGAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTg                                                                                        >  5:339325/1‑149 (MQ=255)
                                                            gaccattaGGTCTGCCGGGCTTCGCTCAGGGTTACCGGGCGGGGGCTGG‑GATACTGCAGGCGGGTT‑TGCCGGCGGGCCTCAAGCCGGGCGAGCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACt                                                                                         <  1:91770/141‑1 (MQ=255)
                                                             gcAGGAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTgg                                                                                       <  8:289894/149‑1 (MQ=255)
                                                              cAGGAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGACACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGc                                                                                      >  4:324371/1‑149 (MQ=255)
                                                              cAGGAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGc                                                                                      >  7:139426/1‑149 (MQ=255)
                                                               aGGAAGGTCTGACCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGGCGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAATCCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGcc                                                                                     >  8:80564/1‑149 (MQ=255)
                                                                ggAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGccc                                                                                    <  1:217694/149‑1 (MQ=255)
                                                                   aGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGAt                                                                                 >  1:84681/1‑149 (MQ=255)
                                                                          cccGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGCAGATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGc                                                                            >  1:244916/1‑148 (MQ=255)
                                                                           ccGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCAc                                                                         <  8:316851/149‑1 (MQ=255)
                                                                            cGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAACCCCCCAGGCGTGCGGAGGCGGCAGTGACCTGGCCCGATTCGGCCACg                                                                        >  8:271902/1‑149 (MQ=255)
                                                                                  cGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGa                                                                    <  3:255843/147‑1 (MQ=255)
                                                                                     tCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAAt                                                               >  7:323923/1‑149 (MQ=255)
                                                                                     tCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAAt                                                               >  3:258442/1‑149 (MQ=255)
                                                                                       aGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGGAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATtc                                                             <  5:277301/149‑1 (MQ=255)
                                                                                         ggTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACg                                                                        >  1:158354/1‑136 (MQ=255)
                                                                                         ggTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACg                                                                        <  2:158354/136‑1 (MQ=255)
                                                                                          gTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATtcgtc                                                          <  2:84681/149‑1 (MQ=255)
                                                                                          gTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATtcgtc                                                          <  6:339325/149‑1 (MQ=255)
                                                                                                       tgctgc‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCAt                                             >  3:250142/1‑149 (MQ=255)
                                                                                                       tgctgc‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCAt                                             >  3:255014/1‑149 (MQ=255)
                                                                                                         ctgc‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCATCg                                           >  8:94249/1‑149 (MQ=255)
                                                                                                          tgc‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCATCgg                                          >  3:359496/1‑149 (MQ=255)
                                                                                                            c‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCATCgg                                          <  1:192034/147‑1 (MQ=255)
                                                                                                            c‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCATCGgct                                        <  8:139426/149‑1 (MQ=255)
                                                                                                            c‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCATCGgct                                        >  4:327262/1‑149 (MQ=255)
                                                                                                              gATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCATCGgctg                                       >  8:105237/1‑149 (MQ=255)
                                                                                                               aTACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCATCGgctgc                                      <  7:94249/149‑1 (MQ=255)
                                                                                                                     cagGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCATCGGCTGCTCaac                                 >  4:116748/1‑146 (MQ=255)
                                                                                                                     cagGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGGTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCATCGGCTGCTCATCg                                <  8:323923/149‑1 (MQ=255)
                                                                                                                       ggCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCATCGGCTGCTCATCGAt                              <  4:255014/149‑1 (MQ=255)
                                                                                                                        gcgcGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCATCGGCTGCTCATCGAt                              <  4:250142/148‑1 (MQ=255)
                                                                                                                          gcgTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCATCGGCTGCTCATCGATTAt                           >  1:149950/1‑149 (MQ=255)
                                                                                                                                  cAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCATCGGCTGCTCATCGATTATCCCtgt                     <  1:144457/148‑1 (MQ=255)
                                                                                                                                   aGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCATCGGCTGCTCATc                                 <  4:71144/135‑1 (MQ=255)
                                                                                                                                   aGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCATCGGCTGCTCATCGATTATCCCtgtgt                   <  6:42244/149‑1 (MQ=255)
                                                                                                                                   aGGCGGTCCTCCAGCCGGGCGATCTGCCGCCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCATCGGCTGCTCATc                                 >  3:71144/1‑135 (MQ=255)
                                                                                                                                    ggCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCATCGGCTGCTCATCGATTATCCCtgtgtg                  >  2:153620/1‑149 (MQ=255)
                                                                                                                                          acatcAGCCGGCAGATCGCCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCATCGGCTGCTCATCGATTATCCCTGTGTGGCaat             >  7:96937/5‑148 (MQ=255)
                                                                                                                                            tccAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCATCGGCTGCTCATCGATTATCCCTGTGTGGCaataat          >  7:53884/1‑149 (MQ=255)
                                                                                                                                            atcAGCCGGCAGATCGCCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCATCGGCTGCTCATCGATTATCCCTGTGTGGCaataat          >  1:599/3‑149 (MQ=255)
                                                                                                                                               aGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCATCGGCTGCTCATCGATTATCCCTGTGTGGCAATAATGtt       >  3:262441/1‑149 (MQ=255)
                                                                                                                                                    ggCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCATCGGCTGCTCATCGATTATCCCTGTGTGGCAATAATGTTTTGTc  >  2:34111/1‑149 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
CCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCAGGGTTACCCGGCGGGTGCTGC‑GATACAGCAGGCGCGTT‑TGCAGGCGGTCCTCCAGCCGGGCGATCTGCCGGCTGATGTGCGATGAGGAAACCCCCAGGCGTTCGGCGGCGGCAGTGAACTGGCCCGATTCGGCCACGGCGACAAATTCGTCGATGCCTTCCCATCGGCTGCTCATCGATTATCCCTGTGTGGCAATAATGTTTTGTC  >  NC_002947/1812156‑1812449

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑