| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,082,281 | T→A | 5.1% | *318L (TAA→TTA) | PP_1861 ← | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,082,281 | 0 | T | A | 5.1% | 232.1 / 2.2 | 79 | *318L (TAA→TTA) | PP_1861 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (40/35); new base A (2/2); total (42/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.67e-01 | |||||||||||
ATCAGCAACGAGGTGGAGTGCAGGGCGAAACAGACCTGGTTGTCCAGCAGCAGCTCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCGTAGCGCGTAAATGCCGCTGGTCTCAGCTTCAGGC > NC_002947/2082136‑2082427 | atcaGCAACGAGGTGGAGTGCAGGGCGAAACAGACCTGGTTGTCCAGCAGCAGCTCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAAt > 3:228880/1‑149 (MQ=255) atcGAGGTGGAGTGCAGGGCGAAACAGACCTGGTTGTCCAGCAGCAGCTCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGATTAATTCGCGCa < 2:298347/147‑1 (MQ=255) aaCGAGGTGGAGTGCAGGGCGAAACAGACCTGGTTGTCCAGCAGCAGCTCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGATTAATTCGCGCa > 8:218610/1‑149 (MQ=255) aCGAGGTGGAGTGCAGGGCGAAACAGACCTGGTTGTCCAGCAGCAGCTCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCaa > 4:296578/1‑149 (MQ=255) aGGTGGAGTGCAGGGCGAAACAGACCTGGTTGTCCAGCAGCAGCTCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGATTAATTCGCGCactga < 7:218610/149‑5 (MQ=255) aGGTGGAGTGCAGGGCGAAACAGACCTGGTTGTCCAGCAGCAGCTCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAAtt > 2:366603/1‑148 (MQ=255) gAGTGCAGGGCGAAACAGACCTGGTTGTCCAGCAGCAGCTCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCACGCAATTCACTgc < 4:220503/149‑1 (MQ=255) ggCGAAACAGACCTGGTTGTCCAGCAGCAGCTCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTaa < 5:26167/125‑1 (MQ=255) ggCGAAACAGACCTGGTTGTCCAGCAGCAGATCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTaa > 6:26167/1‑125 (MQ=255) ggCGAAACAGACCTGGTTGGCCAGCAGCAGCTCGGCACACGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGcc < 6:106779/149‑1 (MQ=255) cAGACCTGGTTGTCCAGCAGCAGCTCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTcc > 7:154020/1‑148 (MQ=255) cAGACCTGGTTGTCCAGCAGCAGCTCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTcc > 7:137123/1‑148 (MQ=255) aGACCTGGTTGTCCAGCAGCAGCTCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTcc > 2:102848/1‑147 (MQ=255) aCCTGGTTGTCCAGCAGCAGCTCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTAGAAAGTCATCAATGGAAAATTCATGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCAATGCGCAAGGGCAGGTCCCAgg > 2:296606/1‑149 (MQ=255) ccTGGTTGTCCAGCAGCAGCTCGTCACAGGAGGCTTGTGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAggg < 4:44103/149‑1 (MQ=255) ccTGGTTGTCCAGCAGCAGCTCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAggg > 4:285677/1‑149 (MQ=255) cTGGTTGTCCAGCAGCAGCTCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAgg > 2:342532/1‑135 (MQ=255) cTGGTTGTCCAGCAGCAGCTCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGt < 1:102848/149‑1 (MQ=255) cTGGTTGTCCAGCAGCAGCTCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGt > 4:10688/1‑149 (MQ=255) ttGTCCAGCAGCAGCTCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGaa < 7:167960/149‑1 (MQ=255) tCCAGCAGCAGCTCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCg > 7:15355/1‑149 (MQ=255) cagcagcagCTCGTCAGAGGATGCTTGTGTGTGGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGATAATTCTGGCACGCTGATCATCAGTGCGTGTATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCgg < 1:278868/148‑1 (MQ=255) cagcagcagCTCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTc > 4:22927/1‑133 (MQ=255) cagcagcagCTCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTc < 3:22927/133‑1 (MQ=255) cagcagcagCTCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCggg > 8:5106/1‑149 (MQ=255) agcagcTCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTg > 5:190474/1‑148 (MQ=255) agcTCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGACTTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGc < 4:228880/149‑1 (MQ=255) gTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAGTCGGGCTGAAGCGGctc > 2:283079/1‑149 (MQ=255) aggaggCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCtt > 5:54023/1‑146 (MQ=255) aggaggCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAg > 3:118436/1‑149 (MQ=255) aggaggCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAg < 1:327727/149‑1 (MQ=255) aggaggAGTGGGTGGCGGCGTTCATGAAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGa < 6:54023/148‑1 (MQ=255) gaggCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAgg > 7:287020/1‑148 (MQ=255) gaggCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAgg > 6:9041/1‑148 (MQ=255) gggTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGag > 6:304218/1‑149 (MQ=255) ggTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGagc < 3:296578/149‑1 (MQ=255) ggTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGag < 7:330457/148‑1 (MQ=255) gtgtCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGagca < 6:190474/149‑1 (MQ=255) gTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACgg > 5:70077/1‑149 (MQ=255) tggaTGGAGGTGCTTGAAAGTCATCAATGGAAAAGTCTGGGAGGCTGATGAACAGTGCGCGAAGTAATCGCCCATTTCACTGCGCAAGGCCAGGTCCCGGGGTGGAATCGGGCTGCAGCGGGTCTGGGGGAATTCGCGGAGGAGACGGc > 6:83998/4‑149 (MQ=255) cAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGc > 6:337456/1‑146 (MQ=255) aGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCgaga < 3:285677/149‑1 (MQ=255) aGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCga > 1:153107/1‑147 (MQ=255) tCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGtt > 3:299047/1‑149 (MQ=255) aaaGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGTAGCGGCTCTTGAGGAATTCGCGCAGCAAACGGCTGCGAGAGTTCGttt < 7:5106/148‑1 (MQ=255) aaGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCa > 3:215001/1‑149 (MQ=255) aGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCAt < 5:337456/149‑1 (MQ=255) atcaCTGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCga < 3:232620/132‑1 (MQ=255) atcaATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCga > 4:232620/1‑132 (MQ=255) atcaATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGc > 1:28569/1‑149 (MQ=255) aTGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCtt > 4:163748/1‑100 (MQ=255) aTGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCtt < 3:163748/100‑1 (MQ=255) gAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGa < 8:288168/108‑1 (MQ=255) aaaaTTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAgg < 8:327304/71‑1 (MQ=255) aaaaTTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAgg > 7:327304/1‑71 (MQ=255) aaaaTTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCGTa < 4:118436/149‑1 (MQ=255) aaTTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCGTAgc < 5:9041/149‑1 (MQ=255) ttCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTGCGTGTCATGTGCCAGGCGTAgcgc > 2:125123/1‑149 (MQ=255) ttCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAAGCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCGTAgcgc < 8:137123/149‑1 (MQ=255) ttCTGGCACGCTCATCCTCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCGTAgcgc < 1:316571/149‑1 (MQ=255) tGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCGTAGCGCGt > 4:236713/1‑148 (MQ=255) gCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCga > 6:364539/1‑115 (MQ=255) gCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCga < 5:364539/115‑1 (MQ=255) gCTGATCATCAGTGCGCGTATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCGTAGCGCGTAAATGcc < 5:196110/149‑1 (MQ=255) cTGATCATCTCTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCACCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCCTAGCGCGTAAATGCCg < 8:154020/149‑1 (MQ=255) tGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCGTAGCGCGTAAATGCCGc < 2:28569/149‑1 (MQ=255) atcaGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCGTAGCGCGTAAATGCCGCTGGtc > 2:198091/1‑149 (MQ=255) atcaGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCGTAGCGCGTAAATGCCGCTGGtc > 1:56869/1‑149 (MQ=255) tcaGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCGTAGCGCGTAAATGCCGCTg > 2:373809/1‑145 (MQ=255) tcaGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCGTAGCGCGTAAATGCCGCTg < 1:373809/145‑1 (MQ=255) aattGCGCGATTAATTCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCGTAGCGCGTAAATGCCGCTGGtct > 7:106848/4‑148 (MQ=255) gTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCGTAGCGCGTAAATGCCg < 3:52627/139‑1 (MQ=255) gTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCGTAGCGCGTAAATGCCg > 4:52627/1‑139 (MQ=255) tGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCGTAGCGCGTAAATGCCGCTGGTCTCAGc < 2:153107/149‑1 (MQ=255) gcgAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCGTAGCGCGTAAATGCCGCTGGTCTCAGCtt > 1:108091/1‑148 (MQ=255) gAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGATTCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCGTAGCGCGTAAATGCCGCTGGTCTCAGCTTCAg < 1:283079/149‑1 (MQ=255) gAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCGTAGCGCGTAAATGCCGCTGGTCTCAGCTTCAg > 1:144509/1‑149 (MQ=255) gAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCGTAGCGCGTAAATGCCGCTGGTCTCAGCTTCAg < 3:236713/149‑1 (MQ=255) aaTTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCGTAGCGCGTAAATGCCGCTGGTCTCAGCTTCAgg < 5:304218/149‑1 (MQ=255) ttAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCGTAgcgc < 1:145728/120‑1 (MQ=255) ttAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCGTAgcgc > 2:145728/1‑120 (MQ=255) ttAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCGTAGCGCGTAAATGCCGCTGGTCTCAGCTTCAGGc > 5:151640/1‑148 (MQ=255) | ATCAGCAACGAGGTGGAGTGCAGGGCGAAACAGACCTGGTTGTCCAGCAGCAGCTCGTCACAGGAGGCTTGGGTGTCGGCGTTCATGCAGGTCCTTGAAAGTCATCAATGGAAAATTCTGGCACGCTGATCATCAGTGCGCGAATTAATCGCGCAATTCACTGCGCAAGGCCAGGTCCCAGGGTGGAATCGGGCTGAAGCGGCTCTTGAGGAATTCGAGCAGCAAACGGCTGCGAGAGTTCGTTTCATGTGCCAGGCGTAGCGCGTAAATGCCGCTGGTCTCAGCTTCAGGC > NC_002947/2082136‑2082427 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |