| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,630,176 | C→G | 5.8% | A378G (GCC→GGC) | clpX → | ATP‑dependent Clp protease ATP‑binding subunit ClpX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,630,176 | 0 | C | G | 5.8% | 265.5 / 4.0 | 82 | A378G (GCC→GGC) | clpX | ATP‑dependent Clp protease ATP‑binding subunit ClpX |
| Reads supporting (aligned to +/- strand): ref base C (42/35); new base G (2/3); total (44/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCTTGACGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAGGGCACCTCGCAGCCGCTGA > NC_002947/2630030‑2630322 | ccTTGACGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGccc > 4:4659/1‑149 (MQ=255)ccTTGACGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGccc > 2:54186/1‑149 (MQ=255)ccTTGACGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGccc > 3:234513/1‑149 (MQ=255) ttGACGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTg > 8:172538/1‑149 (MQ=255) ttGACGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTg > 5:267651/1‑149 (MQ=255) aCGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAg > 3:217245/1‑149 (MQ=255) gAGCTGGATGAGGCTGCGTTGATGCAGATACTCACCGACCCGAAGAATGCGCTGACCAACCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTACCGCAGCGATGCGCTCAAGGCCGTTGCACCCACGGCCCTGGAgcg > 4:93006/1‑149 (MQ=255) cTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCCAGGGCCTTGCGTGCAACGGCCTTGAGCGCat < 3:171067/149‑2 (MQ=38) gATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGa < 2:316269/148‑1 (MQ=255) gATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGAc > 6:290120/1‑149 (MQ=255) ggCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGgcg > 2:357530/1‑149 (MQ=255) gCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGCCCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGgcgc > 4:181148/1‑149 (MQ=255) gCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGgcgc > 5:186388/1‑149 (MQ=255) ttGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTgg > 5:74495/1‑149 (MQ=255) gATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGc < 6:361098/148‑1 (MQ=255) tGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTg > 1:206147/1‑149 (MQ=255) gCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCt < 5:368782/147‑1 (MQ=255) gCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCt > 6:368782/1‑147 (MQ=255) gCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGc > 6:193633/1‑149 (MQ=255) gCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGc > 3:106897/1‑149 (MQ=255) aGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGt > 1:252692/1‑149 (MQ=255) ccTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑Ga > 8:292182/1‑149 (MQ=255) cACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATcc > 1:144943/1‑149 (MQ=255) aGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGaa < 2:206147/149‑1 (MQ=255) ccGAAGAATGCGCTGACCAAGCAGTATGCGAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCCAGGGCCTTGCGTGCAACGGCCTTGAgc > 5:99935/1‑109 (MQ=25) ccGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCCAGGGCCTTGCGTGCAACGGCCTTGAgc < 6:99935/109‑1 (MQ=37) cGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGACTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGc > 7:148228/1‑149 (MQ=255) gaagaaTGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCg < 4:55742/149‑1 (MQ=255) tGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGc < 6:103513/149‑1 (MQ=255) tGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGc > 7:119393/1‑149 (MQ=255) cTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGa < 3:4659/149‑1 (MQ=255) tGACCAAGCAGTATGCCAAGCTGTTCGATATCGAAAGAGTGGACCTCGAGTTCCGCAGCGATGCGCTGAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCg < 7:142603/147‑1 (MQ=255) gACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCGCGATa < 5:334764/149‑1 (MQ=255) aCCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGTCGCT‑‑‑CGTGGCCTGCGTTC‑GATCATCGAAGGCGTGTTGCTCGATAc > 5:236204/1‑149 (MQ=255) aCCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATAc < 2:252692/149‑1 (MQ=255) cAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCa > 7:3874/1‑149 (MQ=255) aaGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCAt < 5:193633/149‑1 (MQ=255) aaGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCAt < 8:50192/149‑1 (MQ=255) aGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGGCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATg < 5:290120/149‑1 (MQ=255) aGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTAt < 1:54186/149‑1 (MQ=255) tATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCt > 1:137816/1‑119 (MQ=255) tATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCt < 2:137816/119‑1 (MQ=255) cAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTTGAAGGCGTGTTGCTCGATACCATGTATGAGATcc > 8:176213/1‑149 (MQ=255) gCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCtt < 4:106897/149‑1 (MQ=255) gCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCtt < 6:74495/149‑1 (MQ=255) gCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCtt < 5:286259/149‑1 (MQ=255) cTGTTCGAGATGTAAAGCGTAGACCTCGATGTCAGGATCGTTGATCTCACTGCCGTTGCACGCTATGCCCTGGAGCTCCAGACTGGAGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACAATGTATGAGATCCCtt < 8:135645/148‑1 (MQ=255) cTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTc < 7:114756/149‑1 (MQ=255) ttCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGa < 8:119393/148‑1 (MQ=255) cGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTAt < 7:242912/133‑1 (MQ=255) cGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTAt > 8:242912/1‑133 (MQ=255) gagaTGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGaaaaa < 7:292182/149‑1 (MQ=255) aTGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGa > 3:57685/1‑149 (MQ=255) tGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGAt < 6:72283/149‑1 (MQ=255) aaGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGt > 5:145781/1‑147 (MQ=255) aaGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCa < 4:57685/149‑1 (MQ=255) gTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTGGGAGTGGCCTCCTTTCGGATCAACGAAGGCGTGTTGATCGATACCATGTATGAGATCCCTACGAAAAAGGATGt > 1:116910/1‑147 (MQ=255) gTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGc > 1:357870/1‑147 (MQ=255) tCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATAc < 8:190039/112‑1 (MQ=255) tCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCACTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATAc > 7:190039/1‑112 (MQ=255) gACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAggt < 1:357530/149‑1 (MQ=255) cTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCACggtggt > 4:55723/1‑149 (MQ=255) cTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAggtggt > 2:350370/1‑149 (MQ=255) cTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAggtggt > 8:118657/1‑149 (MQ=255) cTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAggtggt > 4:282266/1‑149 (MQ=255) aGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATc < 8:3874/149‑1 (MQ=255) gTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATc > 3:81900/1‑148 (MQ=255) ttCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATcga > 8:294485/1‑149 (MQ=255) gCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACgag > 1:133947/1‑149 (MQ=255) gcTCCAGGGCCTTGCGTGCAACGGCCTTGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCAtt > 3:366585/1‑148 (MQ=38) tCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAg > 3:348912/1‑149 (MQ=255) aaGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAggg > 6:371474/1‑149 (MQ=255) aaGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAg < 2:116910/147‑1 (MQ=255) aaGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAg < 3:93006/147‑1 (MQ=255) aaGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAg < 4:81900/147‑1 (MQ=255) gCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAGGGCAc > 6:45209/1‑149 (MQ=255) cACGGAAGGCCCTGGAGCGCAAGACTTGCGCT‑‑‑CGTTGCCTGCGTTC‑GATCCTCTAAGGCGTGTTGCTCGATACAATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTTAGGGCACCTCGCAg < 6:236204/149‑1 (MQ=255) cACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAGGGCACCTCGCa < 6:267651/148‑1 (MQ=255) aCGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAGGGCACCTCGCAGc > 4:288363/1‑149 (MQ=255) gCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATgag > 6:288487/1‑80 (MQ=255) gCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATgag < 5:288487/80‑1 (MQ=255) gCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGAAAGGTGGTTATCGACGAGAGCGTCATTGAGGGCACCTCGCAGCCg > 1:41455/1‑149 (MQ=255) ggCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAGGGCACCTCGCAGCCGCtga > 1:160820/1‑149 (MQ=255) ggCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAGGGCACCTCGCAGCCGCtga < 2:133947/149‑1 (MQ=255) ggCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAGGGCACCTCGCAGCCGCtga < 3:288363/149‑1 (MQ=255) | CCTTGACGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCT‑‑‑CGTGGCCTGCGTTC‑GATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAGGGCACCTCGCAGCCGCTGA > NC_002947/2630030‑2630322 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |