| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 225,369 | A→G | 8.6% | S98P (TCG→CCG) | PP_0173 ← | transcriptional factor‑like protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 225,369 | 0 | A | G | 8.6% | 221.4 / 9.9 | 82 | S98P (TCG→CCG) | PP_0173 | transcriptional factor‑like protein |
| Reads supporting (aligned to +/- strand): ref base A (38/36); new base G (3/4); total (42/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.14e-01 | |||||||||||
AATGGCGCATCCCGCAACTGCCGCGCCAGTGCATCGCTGATTCGCGCCACCAGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCC > NC_002947/225221‑225516 | aaTGGCGCATCCCGCAACTGCCGCGCCAGTGCATCGCTGATTCGCGCCACCAGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGa > 1:326393/1‑149 (MQ=255) cgcATCCCGCAACTGCCGCGCCAGTGCATCGCTGATTCGCGCCACCAGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGt < 2:117212/149‑1 (MQ=255) cccGCAACTGCCGCGCCAGTGCATCGCTGATTCGCGCCACCAGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGTCGGCCAGTGccgt < 3:229940/149‑3 (MQ=255) ccGCAACTGCCGCGCCAGTGCATCGCTGATTCGCGCCACCAGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAAc < 2:326393/149‑1 (MQ=255) aCTGCCGCGCCAGTGCATCGCTGATTCGCGCCACCAGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCgaat < 8:118524/149‑1 (MQ=255) ccGCGCCAGTGCATCGCTGATTCGCGCCACCAGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCgaatggaa > 1:103306/1‑149 (MQ=255) aGTGCATCGCTGATTCGCGCCACCAGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCtt > 1:237542/1‑149 (MQ=255) gCTGATTCGCGCCACCAGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTg < 3:277481/148‑1 (MQ=255) gCTGATTCGCGCCACCAGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGc < 7:258166/149‑1 (MQ=255) tGATTCGCGCCACCAGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCa > 1:188352/1‑115 (MQ=255) tGATTCGCGCCACCAGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCa < 2:188352/115‑1 (MQ=255) aTTCGCGCCACCAGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGt < 4:176944/147‑1 (MQ=255) tCGCGCCACCAGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGAc > 6:352941/1‑109 (MQ=255) tCGCGCCACCAGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGAc < 5:352941/109‑1 (MQ=255) ccaccaGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCgg > 3:269059/1‑148 (MQ=255) accaGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGaa < 5:76190/149‑1 (MQ=255) aGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGCCCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAatat > 3:33086/1‑149 (MQ=255) gCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAatat > 7:330039/1‑148 (MQ=255) cTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCa < 8:22998/149‑1 (MQ=255) tCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGTCGGCCAGTGccgtgg > 4:133073/1‑103 (MQ=255) tCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGTCGGCCAGTGccgtgg < 3:133073/107‑5 (MQ=255) ccACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGc < 4:104205/149‑1 (MQ=255) cACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCATGGCACTGGTCGGCCAGTGccgtg > 4:217061/1‑101 (MQ=255) cACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCATGGCACTGGTCGGCCAGTGccgtg < 3:217061/104‑4 (MQ=255) cACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAg < 6:172195/147‑1 (MQ=255) cACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAg < 5:235103/147‑1 (MQ=255) cACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGc < 2:237542/148‑1 (MQ=255) aCGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGa < 7:95265/149‑1 (MQ=255) gCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGaaa < 6:181802/149‑1 (MQ=255) ccTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGc > 5:219449/1‑149 (MQ=255) tCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGAACTGGCCGACCAGTGCCAGCCGAATGGAATGATCTTGGCATTGCGTTCAAGCGGGAAGATCAGCGAAAGcac > 6:278666/1‑147 (MQ=255) cccTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGtt < 8:166560/149‑1 (MQ=255) ccTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGAGTTCCAGCGGGAAGATCAGCGAAAGCTCGTTg > 8:63688/1‑149 (MQ=255) cGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCACGTTGAGGt > 7:99448/1‑149 (MQ=255) cTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCt < 2:103306/149‑1 (MQ=255) tGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGa > 3:124453/1‑139 (MQ=255) tGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGa < 4:124453/139‑1 (MQ=255) tGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTc > 6:133696/1‑149 (MQ=255) cAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGa < 1:213936/149‑1 (MQ=255) aaCGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGaa > 7:20469/1‑116 (MQ=255) aaCGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGaa < 8:20469/116‑1 (MQ=255) aCGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGa > 4:103159/1‑147 (MQ=255) gCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGt > 2:45160/1‑149 (MQ=255) gCATCCCCTCGCAGATCTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGAACTCGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCACCGGGAATATCAGCCAAAGCTCCTTGAGGTCACGCTCGACAGt > 3:91951/1‑149 (MQ=255) aTCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGc > 2:154425/1‑118 (MQ=255) aTCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGc < 1:196443/118‑1 (MQ=255) aTCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGc > 2:196443/1‑118 (MQ=255) aTCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGc < 1:154425/118‑1 (MQ=255) aTCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAg < 1:140919/132‑1 (MQ=255) aTCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAg > 2:140919/1‑132 (MQ=255) aTCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGc > 7:15253/1‑149 (MQ=255) ccTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGttt > 4:339916/1‑149 (MQ=255) ccTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGttt > 5:50742/1‑149 (MQ=255) gCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGc < 1:93223/147‑1 (MQ=255) cAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGa < 3:276932/149‑1 (MQ=255) gtgtCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGt > 2:62154/1‑148 (MQ=255) tgtCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCACGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGa < 8:99448/149‑1 (MQ=255) gtCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGaa > 2:307199/1‑149 (MQ=255) tCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGaa < 3:103159/148‑1 (MQ=255) tCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAg > 7:238102/1‑149 (MQ=255) gAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCAATGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGCAGCCAACGTCAc > 5:292670/1‑149 (MQ=255) aaaTTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGc < 7:1490/139‑1 (MQ=255) aaaTTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGc > 8:1490/1‑139 (MQ=255) cgcgCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGGCACGCTCGACAGTGCGTTTGCTGACCGGGAAGCCAACGTCACGCAGgcgc < 3:62829/149‑1 (MQ=255) gcgcAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGAcc < 4:296901/124‑1 (MQ=255) gcgcAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGAcc > 3:296901/1‑124 (MQ=255) cgcAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGgcgc > 3:174548/1‑147 (MQ=255) cgcAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCa < 6:219449/149‑1 (MQ=255) aaTTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGAc < 8:330039/149‑1 (MQ=255) aTTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGAcc < 8:15253/149‑1 (MQ=255) aTTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGAcc < 4:174548/149‑1 (MQ=255) aTTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGAc > 4:266264/1‑148 (MQ=255) cccACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTc > 1:90921/1‑149 (MQ=255) cccACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTc > 2:293347/1‑149 (MQ=255) gttggCACTGGTCGGCCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGgc > 2:193733/4‑134 (MQ=255) gttggCACTGGTCGGCCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGgc < 1:193733/131‑1 (MQ=255) cACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTg > 4:296437/1‑149 (MQ=255) tGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGAc < 4:160592/133‑1 (MQ=255) tGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGAc > 3:160592/1‑133 (MQ=255) tGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGt > 5:67520/1‑148 (MQ=255) gCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTAt > 5:275158/1‑149 (MQ=255) cGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGc > 3:166747/1‑149 (MQ=255) gACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGcc > 1:37578/1‑149 (MQ=255) | AATGGCGCATCCCGCAACTGCCGCGCCAGTGCATCGCTGATTCGCGCCACCAGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCC > NC_002947/225221‑225516 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |