| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 36,169 | G→T | 7.6% | intergenic (+54/+29) | PP_0032 → / ← PP_0033 | hypothetical protein/undecaprenyl‑glycosyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 36,169 | 0 | G | T | 7.6% | 338.2 / 11.9 | 116 | intergenic (+54/+29) | PP_0032/PP_0033 | hypothetical protein/undecaprenyl‑glycosyl transferase |
| Reads supporting (aligned to +/- strand): ref base G (56/51); new base T (4/5); total (60/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.37e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.23e-01 | |||||||||||
Only 100 of 119 total aligned reads displayed.
TATGGAGCGATGACTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATC > NC_002947/36021‑36315 | gAGCGATGACTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTaa < 4:12529/148‑1 (MQ=255) aTGACTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTg > 1:128762/1‑149 (MQ=255) aCTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑t > 3:254839/1‑149 (MQ=255) aCTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑t > 3:136847/1‑149 (MQ=255) ctctTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑tt > 3:246982/1‑149 (MQ=255) tctTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGTTTTACCCTGGC‑tt > 2:128722/1‑148 (MQ=255) tctTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑ttt > 2:55412/1‑149 (MQ=255) tctTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑ttt > 2:243739/1‑149 (MQ=255) ttCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGTTTTACCCTGGC‑tt < 1:128722/146‑1 (MQ=255) ttCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑ttttt > 8:96530/1‑149 (MQ=255) ctgaacAGAACAAAAAAAAAGTCGCTCAATAGCAAAAGAAAGAAAGCAAGGATGTTAAGGAACAAGCAGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑ttttt‑‑t < 8:271486/143‑1 (MQ=255) cgtaCCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGTTAAGGAACAAGCCGACAATTAATCTGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑ttttt‑‑t < 3:258244/145‑1 (MQ=255) cGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTTAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGAATTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑tg > 1:102924/1‑149 (MQ=255) cGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑ttttt‑‑t < 4:246982/148‑1 (MQ=255) cGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑ttttt‑‑t < 6:159221/148‑1 (MQ=255) cGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑ttttt < 7:147259/147‑1 (MQ=255) cGGACCAGAAAAAACAACAAGTCGCTCAAGATCAAAATAAAGAAAGCAAGGATGGTAAGGAACAAGCCGAAAATTAATCGGCTGTTAAATAGGACTTCAAATGACGAACGAAATCGACAAAAAAGCCAGGTTTTACCCTGGC‑tttt < 3:12352/146‑1 (MQ=255) ggACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGTTTTACCCTGGC‑TTTTT‑‑tgt < 2:141922/149‑1 (MQ=255) ggACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGTTTTACCCTGGC‑TTTTT‑‑tgt < 7:277269/149‑1 (MQ=255) gACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAATCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑tgtg < 6:84649/149‑1 (MQ=255) aCCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGc > 4:310656/1‑149 (MQ=255) cAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCtt < 3:357872/149‑1 (MQ=255) gAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑ttttt > 7:328649/1‑140 (MQ=255) gAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑ttttt < 8:328649/140‑1 (MQ=255) gAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTg > 2:347453/1‑148 (MQ=255) gAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTg > 5:168186/1‑148 (MQ=255) aacaaacaACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑ttttt‑‑t > 5:84898/1‑140 (MQ=255) aacaaacaACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑ttttt‑‑t < 6:84898/140‑1 (MQ=255) aacaacAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAAtt > 3:130891/1‑148 (MQ=255) acaacaAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAAtt > 2:293814/1‑147 (MQ=255) acaacaAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAAtt > 8:248614/1‑147 (MQ=255) acaaGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGcc < 5:160447/149‑1 (MQ=255) acaaGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGcc > 1:38157/1‑149 (MQ=255) aaGTNGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCt > 5:232633/1‑148 (MQ=255) aaGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTTCTTGGAATTTAGCCt > 7:251255/1‑148 (MQ=255) aaGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCtt < 4:276389/149‑1 (MQ=255) gTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCg > 2:249159/1‑149 (MQ=255) cTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCt > 3:335851/1‑149 (MQ=255) tCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCAAGCGTAAAACATGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTAGTTCtt > 3:369292/1‑149 (MQ=255) aaGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGGGACATAGGACGTCAAAGGACGAAAGAAATCGACAAAAAAGCACTGGTAAACCCTCGC‑TTTTT‑‑TGTGCTTGGACTTTCGCCTACGTTCTTGc > 7:174824/1‑149 (MQ=255) agagCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCg < 3:203681/149‑1 (MQ=255) gCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAg < 1:243739/149‑1 (MQ=255) aagaaagaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGtt > 7:28796/1‑149 (MQ=255) aagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACATGGC‑TTTTT‑‑TGTGCTTGGAATTTATCCTTCGTTCTTGCGAGGCGTTACCGCAtg > 1:341330/1‑148 (MQ=255) cgCAAGGATGGGAAGGAACAAGCCGACAATTAATCGGCGTTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTg < 6:232633/148‑1 (MQ=255) gCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCa > 8:350666/1‑145 (MQ=255) cAAGGATGGTAATTTACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCt < 1:315501/149‑1 (MQ=255) tGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTcc < 2:221947/149‑1 (MQ=255) gTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATACGACTTCATATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGATTGGAAATTGGCCTTCTTTCTTGCGAGGAGTTTCCGCATTGCTTTCTCCgt > 5:320265/1‑148 (MQ=255) tAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGc < 5:72044/149‑1 (MQ=255) aGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCa < 7:120001/149‑1 (MQ=255) aaCAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTCTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAg < 1:293814/149‑1 (MQ=255) aaGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCt > 1:201534/1‑149 (MQ=255) gCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCg > 4:370032/1‑149 (MQ=255) gCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCg > 4:97342/1‑149 (MQ=255) cGACAATTAATAGGCGGTTAAATAGGACTTCTATAGACGAAAGAAATCGACAAAAAAGCCTGGGTAACACCTGGC‑TTTTT‑‑AGAGGGAGGAAAAAAGCCTTCGTTGTTGAGACGCGTTTCAGCATTGCTTTGTCCTGCAAGACCATCgg > 2:40525/1‑148 (MQ=255) ttAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTtg > 2:199497/1‑149 (MQ=255) aTCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGc < 7:96530/149‑1 (MQ=255) tCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCg < 8:169801/149‑1 (MQ=255) ggcggTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCggg < 8:12533/149‑1 (MQ=255) gcggTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAg < 1:224539/99‑1 (MQ=255) gcggTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAg > 2:224539/1‑99 (MQ=255) gTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCgg > 8:163334/1‑148 (MQ=255) ttAAATTGGAGTTCAATTGACGATAGAAATCGACAATAAAGCCAGGGTAAAACCTTGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTGCGGCCAGACCCTCGGCACCTTGT‑‑GGGGCGTTTc < 5:32838/149‑1 (MQ=255) aaTAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGcc > 7:152001/1‑118 (MQ=255) aaTAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTc < 1:55412/148‑1 (MQ=255) aTAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTcc > 7:351558/1‑148 (MQ=255) ggACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAAt < 5:52613/148‑1 (MQ=255) gACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATgg > 5:252390/1‑149 (MQ=255) gACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATgg > 1:16375/1‑149 (MQ=255) ttCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCt < 7:173273/125‑1 (MQ=255) ttCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCt > 8:173273/1‑125 (MQ=255) cAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGcaca < 2:102924/148‑1 (MQ=255) aaTGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCACGGCACCTTGTGCGGGGCGTTTCCAATGGCAcagca < 1:249159/149‑1 (MQ=255) aTGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCAcagcag > 3:172704/1‑149 (MQ=255) aagaaaTCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgatgg > 7:262320/1‑149 (MQ=255) aaTCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGctggctgg > 2:131600/1‑149 (MQ=255) aaTCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGctggctgg < 1:199497/149‑1 (MQ=255) aTCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTcc < 7:1323/124‑1 (MQ=255) aTCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTcc > 8:1323/1‑124 (MQ=255) cGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGt > 6:148073/1‑149 (MQ=255) gACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTGCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGtt < 3:47673/149‑1 (MQ=255) aCAAAAAAGCCAGGGTAACACCTGGC‑TTTTT‑‑TGTGCTTGGAAGTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTc > 7:103810/1‑149 (MQ=255) aCAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTc < 4:254839/149‑1 (MQ=255) aCAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTc < 7:264394/149‑1 (MQ=255) cAAAAAAGCCAGGTTTTACCCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTc < 8:86999/148‑1 (MQ=255) cAAAAAAGCCAGGTTTTACCCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTc > 7:86999/1‑148 (MQ=255) cAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCTGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCg < 6:307382/149‑1 (MQ=255) aaaaaaGCCAGTGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTtgt < 6:196100/105‑1 (MQ=255) aaaaaaGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTtgt > 5:196100/1‑105 (MQ=255) aaaaaaGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGc > 5:33544/1‑149 (MQ=255) aaaaaaGCCAGGGTAAAACCTGGC‑GTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGc > 2:285105/1‑149 (MQ=255) aaaaGCCAGGTTTTACCCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCtt > 2:218870/1‑149 (MQ=255) aaaaCCCAGGGTAAATCCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGTCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCtt < 6:320265/149‑1 (MQ=255) aaGCCATTGTAAAACATGTC‑TTTTT‑‑TTTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCg < 8:251255/149‑1 (MQ=255) aaGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCg < 6:252390/149‑1 (MQ=255) ccAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTg < 4:172704/149‑1 (MQ=255) cAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGa > 4:292449/1‑149 (MQ=255) aGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGAt > 6:272628/1‑149 (MQ=255) gggTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATc > 7:159260/1‑149 (MQ=255) | TATGGAGCGATGACTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTT‑‑TGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATC > NC_002947/36021‑36315 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |