| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 235,330 | T→C | 8.2% | intergenic (+27/+98) | PP_0183 → / ← argH | glutathione S‑transferase/argininosuccinate lyase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 235,330 | 0 | T | C | 8.2% | 237.7 / 9.7 | 85 | intergenic (+27/+98) | PP_0183/argH | glutathione S‑transferase/argininosuccinate lyase |
| Reads supporting (aligned to +/- strand): ref base T (39/39); new base C (5/2); total (44/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.49e-01 | |||||||||||
CCGCAGGCCAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACA‑TGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCT > NC_002947/235184‑235477 | ccGCAGGCCAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACA‑TGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGc > 8:6318/1‑149 (MQ=255) gCAGGCCAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACA‑TGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGccc > 7:24836/1‑149 (MQ=255) ccAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACA‑TGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGcgaa < 2:262752/149‑4 (MQ=255) ccAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACA‑TGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTcc < 6:26477/149‑1 (MQ=255) ggCGTTGCTGCAACTGATGGGGGAGAACCCGCACA‑TGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCACGGGCATGCCCGCTCCca > 3:68758/1‑147 (MQ=255) gaaggctcggtgaatgcgcgtgaccacattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTCGCGGGCGtgcccgcgaacga > 5:8651‑M1/127‑143 (MQ=255) gaaggctcggtgaatgcgcgtgaccacattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTCGCGGGCGtgcccgcgaacga > 2:140152‑M1/127‑143 (MQ=255) gTTGCTGCAACTGATGGGGGAGAACCCGCACA‑TGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGt < 7:261081/149‑1 (MQ=255) tgcAACTGATGGGGGAGAACCCGCACAGTGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑Tg > 1:206582/1‑148 (MQ=255) aTGGGGGAGAACCCGCACA‑TGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGttttt < 7:6318/149‑1 (MQ=255) ggggAGAACCCGCACA‑TGCCGCGGATCTTTGCTGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGa < 8:76042/148‑1 (MQ=255) gggAGAACCCGCACA‑TGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGaaa > 5:88620/1‑149 (MQ=255) ggAGAACCCGCACA‑TGCCGCGGATCTTGGCGGACAAGGAAGCGTCGGTGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAAc > 1:81630/1‑149 (MQ=255) agaACCCGCACA‑TGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCACGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACtt < 4:68758/149‑1 (MQ=255) cacattggtggtacggcgccgtcgcaggtgcgtgctgccgtcgttcgtgtcaaggcccttttggcttctcgctaatcccccaaggcgtgggcttcgccctcgTTCTCTGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACtt > 7:272115‑M1/103‑149 (MQ=255) cacattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTCGCGGGCACGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACtt > 3:142945‑M1/103‑149 (MQ=255) acattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTCGCGGGCACGCCCGCTCCCACAGGTAATGCACCGTTTTTGAAACtt > 2:90299‑M1/102‑149 (MQ=255) cccGCACA‑TGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGc < 8:24836/149‑1 (MQ=255) ccGCACA‑TGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCa > 4:116720/1‑149 (MQ=255) ccGCACA‑TGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCa > 2:254687/1‑149 (MQ=255) gCACA‑TGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCAtt < 5:301600/149‑1 (MQ=255) gCACA‑TGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCAt > 4:317563/1‑148 (MQ=255) gCACA‑TGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCAt > 3:18348/1‑148 (MQ=255) gCACA‑TGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCAt > 3:13267/1‑148 (MQ=255) acggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCtg < 4:227016‑M1/59‑1 (MQ=255) ggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCtgtg > 8:110684‑M1/89‑149 (MQ=255) ggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTCGCGGGCACGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACtt > 3:245354‑M1/89‑135 (MQ=255) ggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTCGCGGGCACGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACtt < 4:245354‑M1/47‑1 (MQ=255) gcgcgggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcgcccactgcgagggcttcgccctcgTTCGCGGGCACGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTgg > 3:365364‑M1/88‑149 (MQ=255) gcgccggcgcaggtgcgtgccgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccacggcgagggcttcgccctcgTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTgg > 2:280115‑M1/88‑149 (MQ=255) gcgGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGcgaa < 3:162871/106‑4 (MQ=255) gcgGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGcgaa > 4:162871/1‑103 (MQ=255) cgGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTtgt > 4:153143/1‑134 (MQ=255) cgGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTtgt < 3:153143/134‑1 (MQ=255) cGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGc < 3:48571/149‑1 (MQ=255) ggACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGcc > 3:47024/1‑149 (MQ=255) gACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGccc > 7:106406/1‑149 (MQ=255) ccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAAc > 3:227016‑M1/66‑147 (MQ=255) aGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAAc > 8:73849/1‑147 (MQ=255) cgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTCGCGGGCACGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTgg < 7:262076‑M1/62‑1 (MQ=255) cgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTCGCGGGCACGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTgg > 8:262076‑M1/65‑126 (MQ=255) catccaTGCCGCCCTTCAGGCATAGCACCCGCAGCGCCACCCGCTGTGTCTGGTGGTCACCCCTCCCCGCCCATCCCCGCTCCCCCAGGTC‑TGCCCCGTTTTTTAAACTTGTCCTTTACCTGTGGTAGCGGGCGTGCCCGCGAACGAgg < 8:137412/144‑1 (MQ=255) cGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAgg < 6:88620/149‑1 (MQ=255) gTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCCCCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAggg < 5:357555/149‑1 (MQ=255) gTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCAGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAggg > 2:274013/1‑149 (MQ=255) cGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGct > 2:299615/1‑148 (MQ=255) aTGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCAGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGATACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGaa < 1:274013/149‑1 (MQ=255) tGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAg > 2:266379/1‑149 (MQ=255) gCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGc > 7:336153/1‑149 (MQ=255) ttCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGcc > 5:278279/1‑149 (MQ=255) cATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCCCCGTTTTTGAAACTTGTGCATTACCGGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGTAGCCCTCGCCtt > 1:156354/1‑149 (MQ=255) cATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCTTCGCCCTCgttc < 1:299615/148‑4 (MQ=255) aTGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTTGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTg > 5:233101/1‑149 (MQ=255) tGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTgg < 8:16103/107‑1 (MQ=255) tGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTgg > 7:16103/1‑107 (MQ=255) tGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCTTCGCCCTCgttcgcg > 3:295376/1‑143 (MQ=38) tGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTgg < 2:206582/149‑1 (MQ=255) ggAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTTGATTAACTGTGGGAGCGGGCGTGCTCTCGAACGAGGGCGAAGCCCTCGGCGTggg > 4:5177/1‑149 (MQ=39) ggAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCTTCGCCCTCgttcgcg < 4:295376/148‑7 (MQ=38) gagaTGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTggg < 1:246434/148‑1 (MQ=255) gagaTGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTggg < 3:317563/148‑1 (MQ=255) aggatCCGCAGCGGCATGCGCTGAGGCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGa < 4:80519/146‑1 (MQ=255) tgatCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGAtt < 5:175728/149‑1 (MQ=255) gatCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGAt > 1:313352/1‑147 (MQ=255) gatCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGAt > 8:311157/1‑147 (MQ=255) tCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGc < 2:81630/149‑1 (MQ=255) gccGCTGCGGCACGCGCGGAGTCGGGGGTTGCCCCCTGCGCGGGCATGCCCGCCCCCCCAGGGC‑TGCACCGTTTTTCAAACTTGTGCATTACCTGGGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGc < 5:43427/148‑1 (MQ=255) ccGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGc < 6:20968/86‑1 (MQ=255) ccGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGc > 5:20968/1‑86 (MQ=255) ccGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCg > 2:260477/1‑149 (MQ=255) cGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGc > 5:377866/1‑147 (MQ=255) aGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGAc < 3:77022/149‑1 (MQ=255) aGCGGCAAGCGCTGAGGCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGGGGGAGCGGGCGTGCTCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGAc < 3:5177/149‑1 (MQ=255) aaGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTgg > 7:209101/1‑87 (MQ=255) aaGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTgg < 8:209101/87‑1 (MQ=255) aGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACa < 7:73849/149‑1 (MQ=255) gcTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAggg < 1:254687/149‑1 (MQ=255) tGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGGCCCGTTTTTGAAACTTGTGGATTACCGGTGGGAGCGGGCGGGGCCGCGCACGCGGGCGAAGCCCGCGCCGTGGGGGATTAGCGAGACGCCAACAGGGCCTTGccc > 6:252008/1‑148 (MQ=255) tGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAgg > 3:247732/1‑99 (MQ=255) tGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAgg < 4:247732/99‑1 (MQ=255) tGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCa > 2:58449/1‑149 (MQ=255) aGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAacgac < 3:116720/149‑1 (MQ=255) aGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAacgac < 7:311157/149‑1 (MQ=255) gCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAacgacg < 8:106406/149‑1 (MQ=255) cccTTCGGGGGCATGCCCGAGCCCACAGGTG‑TCCACCTTTTTTTAACCTTGTGCATTACCTGTGGTTGGGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACgg < 6:233101/149‑1 (MQ=255) ccTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGGGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGgc < 2:313352/149‑1 (MQ=255) ATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAATAGGGCCTTGCCACGAACGACGGCAGCACGCACCt < 2:230497‑M1/149‑1 (MQ=255) | CCGCAGGCCAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACA‑TGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCT > NC_002947/235184‑235477 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |