| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,112,855 | C→T | 5.9% | G98S (GGC→AGC) | PP_2727 ← | C factor cell‑cell signaling protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,112,855 | 0 | C | T | 5.9% | 254.1 / 3.8 | 84 | G98S (GGC→AGC) | PP_2727 | C factor cell‑cell signaling protein |
| Reads supporting (aligned to +/- strand): ref base C (43/36); new base T (2/3); total (45/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.58e-01 | |||||||||||
CATCGGGTGCCGACGCAGCAGCGGCAGCAAATGCTTGAGCAGCAGAACAGGGGCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAG > NC_002947/3112709‑3112998 | cATCGGGTGCCGACGCAGCAGCGGCAGCAAATGCTTGAGCAGCAGAACAGGGGCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTTGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGcc > 6:277422/1‑147 (MQ=255) ggTGCCGACGCAGCAGCGGCAGCAAATGCTTGAGCAGCAGAACAGGGGCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTg > 6:67065/1‑149 (MQ=255) cGACGCAGCAGCGGCAGCAAATGCTTGAGCAGCAGAACAGGGGCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTTCAGCACGCTTGGCGTGCTgca < 8:198112/149‑3 (MQ=255) cGACGCAGCAGCGGCAGCAAATGCTTGAGCAGCAGAACAGGGGCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTg > 3:239938/1‑147 (MQ=255) cGACGCAGCAGCGGCAGCAAATGCTTGAGCAGCAGAACAGGGGCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCATGCAGCACGCCAAGCGTGCTg > 7:297015/1‑147 (MQ=255) cGCAGAATCGTCATCAAATGCTTGAGCAGCAGAACAGGGGCGAAACAGTTGGTTGTTAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAg < 5:235787/147‑1 (MQ=255) cagcagCGGCAGCAAATGCTTGAGCAGCAGAACAGGGGCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCa < 5:154990/149‑1 (MQ=255) agcagcGGCAGCAAATGCTTGAGCAGCAGAACAGGGGCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAg < 3:331162/149‑1 (MQ=255) gcagcGGCAGCAATTGCTTGAGCAGCATAACAGGGGCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAgg < 4:175457/149‑1 (MQ=255) gacgcaATTGATTGAGCAGCAGAACAGGGGCGAAACAGTTGGTGTTGAAACCGCTCACCAACCCCGCCATGTCTTGCTGGGGCACTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCTGCCCGCCAAGCGTGCTGAAGACCAGGTTCAGt < 2:354832/146‑1 (MQ=255) cagcaAATGCTTGAGCAGCAGAACAGGGGCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGtt > 1:256203/1‑149 (MQ=255) caAATGCTTGAGCAGCAGAACAGGGGCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGt < 7:295552/149‑1 (MQ=255) caAATGCTTGAGCAGCAGAACAGGGGCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGt > 8:295552/1‑149 (MQ=255) aaTGCTTGAGCAGCAGAACAGGGGCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTATTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCg > 7:169244/1‑149 (MQ=255) tGCTTGAGCAGCAGAACAGGGGCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCgca < 6:148002/149‑1 (MQ=255) tGCTTGAGCAGCAGAACAGGGGCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCg > 4:301598/1‑147 (MQ=255) tGCTTGAGCAGCAGAACAGGGGCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCg > 5:65195/1‑147 (MQ=255) cTTGAGCAGCAGAACAGGGGCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCgcag < 2:256203/148‑1 (MQ=255) gAGCAGCAGAACAGGGGCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTTGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCgcagca < 5:277422/147‑1 (MQ=255) agcagAACAGGGGCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGcc > 6:104696/1‑149 (MQ=255) cagAACAGGGGCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCa > 3:162613/1‑149 (MQ=255) gAACAGGGGCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGGGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCAcc < 8:259595/149‑1 (MQ=255) aGGGGCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTgcg > 2:133221/1‑149 (MQ=255) ggggCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTgcgc < 5:104696/149‑1 (MQ=255) ggggCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTgcgc < 3:286450/149‑1 (MQ=255) gCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTACTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGc < 5:34295/149‑1 (MQ=255) gCGAAACAGTGGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGGGC‑GTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCCCGCCAACCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGc < 3:341077/149‑1 (MQ=255) gAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCa < 2:206878/149‑1 (MQ=255) gttggttgTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGttt > 1:242616/1‑149 (MQ=255) gttggttgTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGttt > 5:385535/1‑149 (MQ=255) ttggttgTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTg > 1:338978/1‑149 (MQ=255) gttgTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCa < 7:105636/148‑1 (MQ=255) gttgTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAg > 5:350757/1‑149 (MQ=255) gttgTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAg > 8:93035/1‑149 (MQ=255) ccgtgAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGt < 1:133221/147‑1 (MQ=255) tgAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGcc > 6:291488/1‑149 (MQ=255) tgAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGc < 6:65195/148‑1 (MQ=255) gCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCg > 4:99306/1‑148 (MQ=255) cTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCgg < 7:130187/148‑1 (MQ=255) tCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGaa < 6:163393/82‑1 (MQ=255) tCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGaa > 5:163393/1‑82 (MQ=255) tCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGAt > 1:43105/1‑149 (MQ=255) tCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGAt > 4:30814/1‑149 (MQ=255) tCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTAAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTc > 7:45124/1‑100 (MQ=255) tCAGAACCCCCGCAATGTCTTGCTGGTTCAGTGA‑TTTTTCAGCCCGCGCCTGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTc < 8:45124/100‑1 (MQ=255) aGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCg > 7:294995/1‑149 (MQ=255) gCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCgg < 2:338978/149‑1 (MQ=255) cAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCggg < 5:186036/149‑1 (MQ=255) ccccGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGt > 5:162660/1‑149 (MQ=255) cccGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTc > 5:136654/1‑149 (MQ=255) cGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCg > 5:4223/1‑148 (MQ=255) gCCATGTCTAGCTGGGTCAGTGCTTTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGc > 4:295264/1‑129 (MQ=255) gCCATGTCTAGCTGGGTCAGTGCTTTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGc < 3:295264/129‑1 (MQ=255) gCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCa < 3:301598/149‑1 (MQ=255) ccATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAg < 5:291488/149‑1 (MQ=255) aTGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTc < 4:239938/149‑1 (MQ=255) tCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCgg > 4:358050/1‑135 (MQ=255) tCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCgg < 3:358050/135‑1 (MQ=255) gCTGGGTCAGTGC‑TTTTTCAGCCGGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGa < 6:41497/149‑1 (MQ=255) gCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCg > 2:78028/1‑148 (MQ=255) cTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGaa > 3:279877/1‑149 (MQ=255) gggTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGaac > 6:32556/1‑148 (MQ=255) aGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCg > 2:263234/1‑149 (MQ=255) ttttCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTcgcgc > 5:25020/1‑149 (MQ=255) ttttCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTcgcgc > 6:32747/1‑149 (MQ=255) tCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTg > 1:155377/1‑149 (MQ=255) gCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGctc > 7:17594/1‑149 (MQ=255) cgcgCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGctct < 6:51692/147‑1 (MQ=255) cgcgCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGctct > 5:51692/1‑147 (MQ=255) gcgcCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCtgtg < 3:30814/149‑1 (MQ=255) gcgcCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCtgt > 5:111533/1‑148 (MQ=255) gcgcCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCtgt < 6:111533/148‑1 (MQ=255) cGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAAc > 8:119910/1‑148 (MQ=255) ggCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTTGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAg < 4:162613/149‑1 (MQ=255) ggCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAg < 4:71525/149‑1 (MQ=255) ccTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAg > 3:77622/1‑35 (MQ=255) ccTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAg < 4:77622/35‑1 (MQ=255) ttcttGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTAt > 2:248837/1‑149 (MQ=255) cttcagcaCGCTTGGCGTGCTGCAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGc > 2:46420/4‑81 (MQ=38) cttcagcaCGCTTGGCGTGCTGCAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGc < 1:46420/78‑1 (MQ=38) ttcagcaCGCTTGGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGctc < 2:357892/129‑1 (MQ=255) ttcagcaCGCTTGGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGctc > 1:357892/3‑131 (MQ=255) gcagcaCGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCCCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAgc > 4:356297/1‑149 (MQ=255) gcaCGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAgcg > 1:83893/1‑147 (MQ=255) aCGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCATGGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGGGCTCTGTGTACAAGGTATCCAGCGCAg < 8:169244/148‑1 (MQ=255) | CATCGGGTGCCGACGCAGCAGCGGCAGCAAATGCTTGAGCAGCAGAACAGGGGCGAAACAGTTGGTTGTGAAACTGCTCAGCAACCCCGCCATGTCTAGCTGGGTCAGTGC‑TTTTTCAGCCCGCGCCGGGCCTTCTTGCAGCACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAG > NC_002947/3112709‑3112998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |