| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,676,956 | A→G | 5.9% | intergenic (‑111/‑42) | PP_3241 ← / → PP_3242 | hypothetical protein/GGDEF domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,676,956 | 0 | A | G | 5.9% | 201.1 / 2.1 | 68 | intergenic (‑111/‑42) | PP_3241/PP_3242 | hypothetical protein/GGDEF domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base A (32/32); new base G (2/2); total (34/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.78e-01 | |||||||||||
ATGGAAAAACCAACGCGTCTGATGAAGAGACTATTCATGCTTCACTCCTTTAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGAGGGCCGCGCCGTGGCGCTGTTCCGCCTGGTACTGGCATTCATGCTGGTGGTGAT > NC_002947/3676808‑3677104 | aTGGAAAAACCAACGCGTCTGATGAAGAGACTATTCATGCTTCACTCCTTTAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGaa < 1:101235/149‑1 (MQ=255) aaaaCCAACGCGTCTGATGAAGAGACTATTCATGCTTCACTCCTTTAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACtata < 4:151027/149‑1 (MQ=255) aaaaCCAACGCGTCTGATGAAGAGACTATTCATGCTTCACTCCTTTAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACtata < 6:12445/149‑1 (MQ=255) aaaaCCAACGCGTCTGATGAAGAGACTATTCATGCTTCACTCCTTTAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACtata < 3:178509/149‑1 (MQ=255) aaaCCAACGCGTCTGATGAAGAGACTATTCATGCTTCACTCCTTTAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGGCTTCCGGCCGTGCGACGCTGAACtata < 1:4003/149‑1 (MQ=255) cgcgTCTGATGAAGAGACTATTCATGCTTCACTCCTTTAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGAc < 2:157096/149‑1 (MQ=255) gcgTCTGATGAAGAGACTATTCATGCTTCACTCCTTTAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACg > 3:346269/1‑149 (MQ=255) gTCTGATGAAGAGACTATTCATGCTTCACTCCTTTAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGc > 8:172745/1‑149 (MQ=255) gagaCTATTCATGCTTCACTCCTTTAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCg > 1:162300/1‑147 (MQ=255) aCTATTCATGCTTCACTCCTTTAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAggg > 8:306418/1‑149 (MQ=255) ttCATGCTTCACTCCTTTAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAg < 7:172745/149‑1 (MQ=255) tCATGCTTCACTCCTTTAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGTGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAg < 8:309108/148‑1 (MQ=255) tGCTTCACTCCTTTAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGAt > 4:251198/1‑149 (MQ=255) gCTTCACTCCTTTAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGAtt > 1:246315/1‑149 (MQ=255) ttCACTCCTTTAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTc > 1:178001/1‑148 (MQ=255) ttCACTCCTTTAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTc > 4:157804/1‑148 (MQ=255) aCTCGTTTAATCCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGATGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAAt < 6:320086/149‑1 (MQ=255) aCTCCTTTAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAAt < 3:248710/149‑1 (MQ=255) aCTCCTTTAAACCGTGGCGCGACCGCAATGTCGCGGACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTACTCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAAt > 6:374416/1‑149 (MQ=255) tCCTTTAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAAtgt > 8:351219/1‑149 (MQ=255) ccTTTAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGa < 7:231711/112‑1 (MQ=255) ccTTTAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGa > 8:231711/1‑112 (MQ=255) cTTTAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAAtgt < 2:162300/147‑1 (MQ=255) cTTTAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTgc > 8:177628/1‑149 (MQ=255) tttAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTgcg > 8:230485/1‑149 (MQ=255) tttAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTgcg > 6:330484/1‑149 (MQ=255) tAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTgcg > 2:339579/1‑147 (MQ=255) gTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAg > 2:260332/1‑148 (MQ=255) tGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGa < 5:354927/149‑1 (MQ=255) gcgACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCACGGATTCCAATGTGCGCAGCCAGGaaa > 6:379331/1‑147 (MQ=255) aCCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGga < 7:230485/149‑1 (MQ=255) aCCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGATTAATCTTTTTTGCCGCCGG‑TTACGGCCGTGCGACGCTGAACTAAAGTGAATAAGGCGAACGCCGTAGGGCCAGGGATTGCAATGTGCGCAGCCAGGAAACAGga > 1:72579/1‑149 (MQ=255) ccTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGgac > 6:66348/1‑149 (MQ=255) tCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGgacga > 3:359173/1‑149 (MQ=255) aaTGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGgacgac > 1:14526/1‑148 (MQ=255) tCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCACGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATg < 5:379331/148‑1 (MQ=255) gTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAGCTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCtt > 1:278308/1‑149 (MQ=255) gTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAGCTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCtt > 1:283018/1‑149 (MQ=255) cGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTc < 4:59307/149‑1 (MQ=255) cGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTc < 5:66348/149‑1 (MQ=255) ttGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTc > 4:289293/1‑146 (MQ=255) ttGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTc < 3:289293/146‑1 (MQ=255) ttGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGcc < 2:178001/149‑1 (MQ=255) ttGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGc > 4:12173/1‑148 (MQ=255) aGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCAt < 7:177628/148‑1 (MQ=255) ggTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAg > 4:360785/1‑149 (MQ=255) ggCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAGCTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGa < 2:283018/149‑1 (MQ=255) ggCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAGCTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGa < 2:278308/149‑1 (MQ=255) gggAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGAGGGc > 7:123262/1‑149 (MQ=255) aaaaGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACAATAGTGAAGACTGCGAACGCCGTAGGGCCAGGGATTCCAAAGTGCGAAGCCAGGAAACAGGACGACGATGGGCTTATCGCCATCAGTGGCGAGGGCcgc > 7:343365/1‑149 (MQ=255) aaGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGAGGGCCgcgc > 4:93844/1‑149 (MQ=255) tttAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGAGGGCCGCGCCGTg > 7:34924/1‑149 (MQ=255) aaTCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGAGGGCCGCGCCGTGgcg > 1:95138/1‑149 (MQ=255) aTCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGAGGGCCGCGCCGTGgcg < 2:95138/148‑1 (MQ=255) tCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGAGGGCCGCGCCGTGGCGCt > 4:297428/1‑149 (MQ=255) ttttttGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGATACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGAGGGCCGCGCCGTGGCGCTGt > 2:160232/1‑149 (MQ=255) ttttGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGAGGGCCGCGCCGTGGCGCt < 3:12173/145‑1 (MQ=255) ccgccgG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGAGGGCCGCGCCGTGGCGCTGTTCCGCCt < 3:251198/149‑1 (MQ=255) ccgccgG‑TGCCGGCCGTGCGACTCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTGCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGAGGGCCGCGCCGTGGCGCTGTTCCGCCt < 1:260332/149‑1 (MQ=255) cgcggG‑TTCCGGCCGGGCGACGGTGAACTATAGTGAAGACTGCGAACGCCGTAGGGCCAGGTATTCCAATGTGCTCAGCCAGGAAACAGGACGTCGATGGTCTTTTCGCCATCAGTGGCGAGGGCCGCGCCGTGGCGCTGTTCCGCCt < 4:74039/148‑1 (MQ=255) cgccgG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGAGGGCCGCGCCGTGGCGCTGTTCCGCCTg > 1:44620/1‑149 (MQ=255) gg‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGAGGGCCGCGCCGTGGCGCTGTTCCGCCTGGTAc < 5:374416/149‑1 (MQ=255) ttCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGAGGGCCGCGCCGTGGCGCTGTTCCGCCTGGTACTg < 2:14526/149‑1 (MQ=255) gCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGAGGGCCGCGCCGTGGCGCTGTTCCGCCTGGTACTGGCAtt < 4:359173/149‑1 (MQ=255) ccGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGAGGGCCGCGCCGTGGCGCTGTTCCGCCTGGTACTGGCATTc < 5:330484/149‑1 (MQ=255) gTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGAGGGCCGCGCCGTGGCGCTGTTCCGCCTGGTACTGGCATTCAt < 7:306418/149‑1 (MQ=255) gTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGAGGGCCGCGCCGTGGCGCTGTTCCGCCTGGTACTGGCATTCAt < 7:351219/149‑1 (MQ=255) cGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGAGGGCCGCGCCGTGGCGCTGTTCCGCCTGGTACTGGCATTCATGCt < 2:44620/149‑1 (MQ=255) cTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGAGGGCCGCGCCGTGGCGCTGTTCCGCCTGGTACTGGCATTCATGCtggtgg < 8:34924/149‑1 (MQ=255) aaCTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGCTTCCAATGTGCGCAGCCAGGAAACAGGACGCCGATGGGCTTTTCGCCATCAGTGGCGAGGGCCGCGCCGTGGCGCTGTTCCGCCTGGTACTGGCATTCATGCGGGTGGTGa > 7:75761/1‑149 (MQ=255) aCTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGAGGGCCGCGCCGTGGCGCTGTTCCGCCTGGTACTGGCATTCATGCTGGTGGTGa < 1:339579/148‑1 (MQ=255) aCTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGAGGGCCGCGCCGTGGCGCTGTTCCGCCTGGTACTGGCATTCATGCTGGTGGTGAt < 4:316399/149‑1 (MQ=255) aCTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGAGGGCCGCGCCGTGGCGCTGTTCCGCCTGGTACTGGCATTCATGCTGGTGGTGAt > 6:358282/1‑149 (MQ=255) | ATGGAAAAACCAACGCGTCTGATGAAGAGACTATTCATGCTTCACTCCTTTAAACCGTGGCGCGACCTCAATGTCGCGTACGGTTGAGGGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGG‑TTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGCGAGGGCCGCGCCGTGGCGCTGTTCCGCCTGGTACTGGCATTCATGCTGGTGGTGAT > NC_002947/3676808‑3677104 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |