Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,766,264 A→T 9.8% I199F (ATT→TTT) ‡ PP_5599 → LysR family transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,766,2640AT 9.8% 165.0 / 8.6 61I199F (ATT→TTT) ‡PP_5599LysR family transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base A (25/30);  new base T (2/4);  total (27/34)
Fisher's exact test for biased strand distribution p-value = 6.85e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.49e-01

CGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCTACATCATGGTCGCCAAAGGCATGGGGGTGTCTGTTGTCCCACTCTGGGCGGGATTGAAGACTGACGACCTACA  >  NC_002947/3766119‑3766412
                                                                                                                                                 |                                                                                                                                                    
cGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTg                                                                                                                                                   <  5:305825/149‑1 (MQ=255)
       aaaaGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCcagca                                                                                                                                            <  2:265676/149‑1 (MQ=255)
       aaaaGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCcag                                                                                                                                              >  6:297192/1‑147 (MQ=255)
       aaaaGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAATCTGCCcaccc                                                                                                                                            <  6:151658/149‑4 (MQ=255)
       aaaaGCATTCGTATACAGGTTCTTCGAGAAGAACAACTGATGCTTTTGACCAAAGCCCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATCACTAACATGACTGGGCTGGGCAGATTGCCcag                                                                                                                                              >  4:333445/1‑147 (MQ=255)
         aaGCATTCGTATACAGGTTCTTCGAGAAGACCCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAATCTGCCcacccca                                                                                                                                          <  4:219399/149‑6 (MQ=255)
             aTTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAACGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAATCTGCCcaccc                                                                                                                                            <  6:183739/143‑4 (MQ=255)
             aTTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGAtt                                                                                                                                                    >  8:133843/1‑135 (MQ=255)
             aTTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGAtt                                                                                                                                                    <  7:133843/135‑1 (MQ=255)
             aTTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAATCTGCCcaccc                                                                                                                                            >  5:189149/1‑140 (MQ=255)
             aTTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAATCTGCCcaccc                                                                                                                                            >  5:183739/1‑140 (MQ=255)
             aTTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAATCTGCCcaccc                                                                                                                                            <  6:189149/143‑4 (MQ=255)
                cGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGaa                                                                                                                                   >  2:6319/1‑149 (MQ=255)
                 gTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGaat                                                                                                                                  <  5:368286/149‑1 (MQ=255)
                 gTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGaat                                                                                                                                  >  4:132488/1‑149 (MQ=255)
                  tataCAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGaat                                                                                                                                  >  7:135087/1‑148 (MQ=255)
                   ataCAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGaatga                                                                                                                                >  4:124613/1‑149 (MQ=255)
                          ttcttcGAGAAGAACCCCTGATTCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGaatgacaatgac                                                                                                                         <  5:252003/149‑1 (MQ=255)
                                tcgaagaaCCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGaatgacaatgac                                                                                                                         >  4:196104/3‑143 (MQ=255)
                                tcgaagaaCCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGaatgacaatgac                                                                                                                         <  3:196104/141‑1 (MQ=255)
                                gagaAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCa                                                                                                                    <  3:132488/148‑1 (MQ=255)
                                      aaCCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGAt                                                                                                             <  1:180916/149‑1 (MQ=255)
                                       aCCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGAt                                                                                                             <  3:15937/148‑1 (MQ=255)
                                           cTGATGCTTTTGAACAAAGACCCCGTTGACAAGCGCGACATCCGCTCGTCGATTCTTGGTAGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCct                                                                                                        <  3:333445/149‑1 (MQ=255)
                                             gATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCctct                                                                                                      >  4:114309/1‑149 (MQ=255)
                                              aTGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCctct                                                                                                      <  1:180105/148‑1 (MQ=255)
                                              aTGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCctct                                                                                                      <  6:230978/148‑1 (MQ=255)
                                              aTGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTg                                                                                                     <  3:334069/149‑1 (MQ=255)
                                                        ccAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGAt                                                                                           >  2:131908/1‑149 (MQ=255)
                                                               ccccGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTgg                                                                                    <  7:74229/149‑1 (MQ=255)
                                                                 ccGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTg                                                                                                     >  3:58065/1‑130 (MQ=255)
                                                                 ccGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTg                                                                                                     <  4:58065/130‑1 (MQ=255)
                                                                   gTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGc                                                                                <  7:258467/149‑1 (MQ=255)
                                                                      gACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTa                                                                              <  2:36332/148‑1 (MQ=255)
                                                                       aCAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATc                                                                            <  6:343787/149‑1 (MQ=255)
                                                                        cAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCt                                                                           <  5:297192/149‑1 (MQ=255)
                                                                           gcgcGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCTAca                                                                        >  3:355415/1‑149 (MQ=255)
                                                                            cgcgACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCTAcat                                                                       <  1:6319/149‑1 (MQ=255)
                                                                             gcgACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCTAcat                                                                       >  2:35581/1‑148 (MQ=255)
                                                                              cgACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGcc                                                                                                                 <  4:348625/105‑1 (MQ=255)
                                                                                aCATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCTACATCATg                                                                   <  4:355415/149‑1 (MQ=255)
                                                                                  aTCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCTACATCATGGt                                                                 >  1:322962/1‑149 (MQ=255)
                                                                                   tCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCTACATCATGGTc                                                                <  3:114309/149‑1 (MQ=255)
                                                                                   tCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCTACATCATGGTc                                                                >  1:123013/1‑149 (MQ=255)
                                                                                            cgaTTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCTACATCATGGTCGCCAAAGGc                                                       <  2:183187/149‑1 (MQ=255)
                                                                                             gaTTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCTACATCATGGTCGCCAAAGGCa                                                      >  7:98276/1‑149 (MQ=255)
                                                                                                 cTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCTACATCATGGTCGCCAAAGGCATgg                                                   <  3:124613/148‑1 (MQ=255)
                                                                                                  ttGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATc                                                                            <  7:304351/122‑1 (MQ=255)
                                                                                                  ttGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATc                                                                            >  8:304351/1‑122 (MQ=255)
                                                                                                    ggTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCTACATCATGGTCGCCAAAGGCATgggg                                                 <  1:35581/147‑1 (MQ=255)
                                                                                                     gTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCTACATCATGGTCGCCAAAGGCATGGGGgtg                                              >  8:28968/1‑149 (MQ=255)
                                                                                                      tCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCTACATCATGGTCGCCAAAGGCATGGGGgtgt                                             >  7:58532/1‑149 (MQ=255)
                                                                                                        gAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCAATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCTACATCATGGTCGCCAAAGGCATGGGGGTGTCt                                           >  5:83145/1‑149 (MQ=255)
                                                                                                           aCCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCTACATCATGGTCGCCAAAGGCATGGGGGTGTCtgtt                                        >  6:357380/1‑149 (MQ=255)
                                                                                                            ccTTATTAGATATGACTCACATGCCTGGGGGGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCTACATCATGGTCGCCAAAGGCATGGGGGTGTCtgttg                                       <  5:22790/149‑1 (MQ=255)
                                                                                                                         gACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCTACATCATGGTCGCCAAAGGCATGGGGGTGTCTGTTGTCCCACTCTGGGc                          >  8:138527/1‑149 (MQ=255)
                                                                                                                            tCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCTACATCATCGTCGCCAAAGGCATGGGGGTGTCTGTTGTCCCACTATGGGCgg                        >  3:291225/1‑148 (MQ=255)
                                                                                                                              acaTGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCTACATCATGGTCGCCAAAGGCATGGGGGTGTCTGTTGTCCCACTCTGGGCGGGAt                     >  1:147382/1‑149 (MQ=255)
                                                                                                                                   ccTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCTACATCATGGTCGCCAAAGGCATGGGGGTGTCTGTTGTCCCACTCTGGGCGGGATTGaa                 <  1:248583/148‑1 (MQ=255)
                                                                                                                                   ccTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCTACATCATGGTCGCCAAAGGCATGGGGGTGTCTGTTGTCCCACTCTGGGCGGGATTGaa                 <  1:131908/148‑1 (MQ=255)
                                                                                                                                             gCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCTACATCATGGTCGCCAAAGGCATGGGGGTGTCTGTTGTCCCACTCTGGGCGGGATTGAAGACTGACGAcc      >  1:366907/1‑149 (MQ=255)
                                                                                                                                                 aTTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCTACATCATGGTCGCCAAAGGCATGGGGGTGTCTGTTGTCCCACTCTGGGCGGGATTGAAGACTGACGACCTACa  <  2:322962/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
CGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTCGATATGACTCACATGCCTGGGGTGGGCAGATTGCCCAGCAGTACTTGAATGACAATGACCTGCAGCCCGATGTCCTCTGTAATCTGGATGCGCTGGATGCTATCTACATCATGGTCGCCAAAGGCATGGGGGTGTCTGTTGTCCCACTCTGGGCGGGATTGAAGACTGACGACCTACA  >  NC_002947/3766119‑3766412

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑