| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,806,760 | C→G | 6.7% | P459R (CCC→CGC) | PP_3364 → | two‑component system response regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,806,760 | 0 | C | G | 6.7% | 213.7 / 3.9 | 71 | P459R (CCC→CGC) | PP_3364 | two‑component system response regulator |
| Reads supporting (aligned to +/- strand): ref base C (35/30); new base G (3/2); total (39/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.37e-01 | |||||||||||
GTGTGCTGATTATTCCGATGTCGCAACACCCAAGGGATTACTTGATCTTCTTCCGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTATCGTCGAGGTGGTGCTGCACAATAGCGAACTGCTCGCCAGTGAACGC > NC_002947/3806622‑3806905 | gtgtGCTGATTATTCCGATGTCGCAACACCCTAGGGATTACTTGATCTTCTTCCGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGTCAGCGGGGCGTCAGGCGGTCGCCCAACGcgccgctgtc < 7:55057/147‑5 (MQ=37)gtgtGCTGATTATTCCGATGTCGCAACACCCAAGGGATTACTTGATCTTCTTCCGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAaga < 2:32171/147‑1 (MQ=255)gtgtGCTGATTATTCCGATGTCGCAACACCCAAGGGATTACTTGATCTTCTTCCGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGc > 7:52088/1‑149 (MQ=255) tgCTGATTATTCCGATGTCGCAACACCCAAGGGATTACTTGATCTTCTTCCGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTc < 7:3776/149‑1 (MQ=255) attCCGATGTCGCAACACCCAAGGGATTACTTGATCTTCTTCCGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTg > 7:188776/1‑149 (MQ=255) cGATGTCGCAACACCCAAGTGATTACTTGATCTTCTTCCGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGgaaa < 4:220087/149‑1 (MQ=255) cGATGTCGCAACACCCAAGGGATTACTTGATCTTCTTCCGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGgaa < 2:354751/148‑1 (MQ=255) cGATGTCGCAACACCCAAGGGATTACTTGATCTTCTTCCGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGga > 3:288561/1‑147 (MQ=255) gATGTCGCAACACCCAAGGGATTACTTGATCTTCTTCCGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGga > 8:248242/1‑146 (MQ=255) gATGTCGAAACACCCAACGGATTACTAGATCTTCTTCCGCAAGGAGGTGGTCGAGACACTCGATTGGGCAGGGGACCCGAACAAGCCCTATGACAGCGGCGGGTTGGGCGACCGCCAGACGCCCCGCAAGAGCTTCCCCATCTgaa > 4:214752/1‑144 (MQ=255) tCGCAACACCCAAGGGATTACTTGATCTTCTTCCGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAAc < 4:288561/149‑1 (MQ=255) gCAACACCCAAGGGATTACTTGATCTTCTTCCGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCg > 7:3558/1‑149 (MQ=255) cAAGGGATTACTTGATCTTCTTCCGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACcag > 7:33205/1‑149 (MQ=255) cAAGGGATTACTTGATCTTCTTCCGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACcag > 7:134926/1‑149 (MQ=255) aaGGGATTACTTGATCTTCTTCCGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACcag > 3:314310/1‑148 (MQ=255) aaGGGATTACTTGATCTTCTTCCGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACcag > 3:87833/1‑148 (MQ=255) ggATTACTTGATCTTCTTCCGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGt < 6:71309/149‑1 (MQ=255) aTTACTTTATTTTCTTCCGCTTGGAGGGGGTCGAGACACTCGATTGGGCCGGGGACCCTAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCg < 4:227769/135‑1 (MQ=255) aTTACTTGATCTTCTTCCGAAAGGAGGTGGTCGAGACACTCGATTGGGCAGGGTACACGAACAATACCTATGACAGCGGCGCGTTGGGATACCGCCTGACGACCCGCAAGAGCTTCGCAAACTGGAAAGAAACCg > 3:227769/1‑135 (MQ=255) ttGATCTTCTTCCGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTAcc > 5:10018/1‑149 (MQ=255) ttGATCTTCTTCCGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTAcc > 6:178028/1‑149 (MQ=255) gATCTTCTTCCGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCt > 4:139770/1‑149 (MQ=255) aTCTTCTTCCGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCt < 7:248242/148‑1 (MQ=255) cttcttCCGCAAGGAGGTGGTCGTGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGa > 4:129216/1‑149 (MQ=255) tcttcCGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGAcc > 3:278745/1‑149 (MQ=255) tcttcCGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGAcc > 5:267320/1‑149 (MQ=255) tcCGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGa < 6:10018/148‑1 (MQ=255) ccGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAg > 3:336189/1‑148 (MQ=255) ccGAAATGAGGTGGTCGAGACACTCGATTGGGCCGGGTACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAATAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAg < 8:175944/148‑1 (MQ=255) gCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACcag < 6:211156/125‑1 (MQ=255) gCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACcag > 5:211156/1‑125 (MQ=255) gCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAg > 7:99014/1‑149 (MQ=255) aaGGAGGTGGTCGAGACACTCGATTTGGCCGGTGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGa < 7:97612/149‑1 (MQ=255) aaGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCACAGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTAACCAGCAGTCGCTACCCTGGACCGAGCAGGa > 5:211002/1‑149 (MQ=255) aggTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGc < 6:267320/149‑1 (MQ=255) ggtggtCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGc > 6:264002/1‑148 (MQ=255) gtggtCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCa < 5:88624/149‑1 (MQ=255) gaCACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCGCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGc < 8:3558/148‑1 (MQ=255) acTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATg > 7:34400/1‑149 (MQ=255) aatCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACAAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATg > 3:219015/3‑149 (MQ=255) cTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGc > 8:157999/1‑149 (MQ=255) tCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGc > 3:74783/1‑148 (MQ=255) tCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCATGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGc > 6:233468/1‑148 (MQ=255) ggggACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGc < 5:233468/149‑1 (MQ=255) aCCCGAACAAGACCTATGACAGCGGCGCGGTGGGCTACCTCCTGACGCCCCGAAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACAGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTAtc < 6:211002/149‑1 (MQ=255) cGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTAtcgtc < 8:52088/149‑1 (MQ=255) gAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTAtcgtc > 8:64310/1‑148 (MQ=255) aaCAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTATCGTCGa < 5:264002/149‑1 (MQ=255) aaCAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTATCGTCGa < 7:64310/149‑1 (MQ=255) aCAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTATCGTCGa < 8:99014/148‑1 (MQ=255) aCAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTATCGTCGAg > 3:370311/1‑149 (MQ=255) aCAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTATCGTCGAg < 8:33205/149‑1 (MQ=255) aGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTATCGTCGAggtg < 3:214752/149‑1 (MQ=255) aCCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTATCGTCGAggtg > 7:114831/1‑147 (MQ=255) aCCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTATCGTCGAggtg < 8:114831/147‑1 (MQ=255) cTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTATCGTCGAggtgg < 6:136832/146‑1 (MQ=255) cTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTATCGTCGAggtgg > 5:136832/1‑146 (MQ=255) tATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTATCGTCGAGGTGGtgct > 7:46288/1‑149 (MQ=255) tcttgcggggCGTCAGGCGGTCGCCCAACGCGCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTATCGTCGAGGTGGTGCTGca > 5:255740/5‑149 (MQ=38) tcttgcggggCGTCAGGCGGTCGCCCAACGCGCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTATCGTCGAGGTGGTGCTGca > 2:265365/5‑149 (MQ=38) ttgcggggCGTCAGGCGGTCGCCCAACGCGCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTATCGTCGAGGTGGTGCTGcac > 5:115467/3‑148 (MQ=255) cggcgCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTATCGTCGAGGTGGTGCTGCACAATa < 4:370311/149‑1 (MQ=255) ggCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTATCGTCGAGGTGGTGCTGCACAATAGCGAACTGc < 5:114065/148‑1 (MQ=255) cGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTATCGTCGAGGTGGTGCTGCACAATAGCGAACTGCTCg < 7:157999/149‑1 (MQ=255) gACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGACATCCGCACCGCTATCGTCGAGGTGGTGCTGCACAATAGAGAACTGCTctc > 6:19124/1‑147 (MQ=255) ccTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTATCGTCGAGGTGGTGCTGCACAATAGCGAACTGCTCGCCAGt > 3:197572/1‑148 (MQ=255) ccaaCGCGCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTATCGTCGAGGTGGTGCTGCACAATAGCGAACTGCTCGCCAGTGa < 6:255740/146‑1 (MQ=255) tGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTATCGTCGAGGTGGTGCTGCACAATAGCGAACTGCTCGCCAGTGaa > 8:5611/1‑149 (MQ=255) cGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTATCGTCGAGGTGGTGCTGCACAATAGCGAACTGCTCGCCAGTGAAcgc < 7:5611/149‑1 (MQ=255) cGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTATCGTCGAGGTGGTGCTGCACAATAGCGAACTGCTCGCCAGTGAAcgc < 4:219015/149‑1 (MQ=255) gCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATg > 1:227276/1‑86 (MQ=255) gCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATg < 2:227276/86‑1 (MQ=255) | GTGTGCTGATTATTCCGATGTCGCAACACCCAAGGGATTACTTGATCTTCTTCCGCAAGGAGGTGGTCGAGACACTCGATTGGGCCGGGGACCCGAACAAGACCTATGACAGCGGCGCGTTGGGCGACCGCCTGACGCCCCGCAAGAGCTTCGCCATCTGGAAAGAAACCGTTCACCAGCAGTCGCTACCCTGGACCGAGCAGGACCGCCAGTTTGGCGATGCCATCCGCACCGCTATCGTCGAGGTGGTGCTGCACAATAGCGAACTGCTCGCCAGTGAACGC > NC_002947/3806622‑3806905 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |