| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,877,151 | C→T | 8.7% | T80T (ACC→ACT) ‡ | PP_3425 → | RND family transporter MFP subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,877,151 | 0 | C | T | 8.7% | 195.0 / 6.9 | 70 | T80T (ACC→ACT) ‡ | PP_3425 | RND family transporter MFP subunit |
| Reads supporting (aligned to +/- strand): ref base C (30/33); new base T (3/3); total (33/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.37e-01 | |||||||||||
CTCCCGCTGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGTGGCGAGCGCC > NC_002947/3877006‑3877299 | cTCCCGCTGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGaa < 7:174228/149‑1 (MQ=255) ccGCTGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGgc > 2:343860/1‑149 (MQ=255) cGCTGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGgcg < 5:58581/149‑1 (MQ=255) gCTGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCCCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGgcgc > 6:251691/1‑149 (MQ=255) gcCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCGGTGAAGGCGACCTgg < 1:241354/149‑1 (MQ=255) gcCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGaa < 4:194990/139‑1 (MQ=255) gcCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGaa > 3:194990/1‑139 (MQ=255) gcCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAgg < 4:62333/149‑1 (MQ=255) aaGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCGGTGAAGGCGACCTGGTcga < 7:91374/149‑3 (MQ=255) aGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTc > 6:230709/1‑146 (MQ=255) aGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCATTCACCGAAGGCGCCCAGGTc > 6:339045/1‑146 (MQ=255) tAAGTGTGGGCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGTCCGCCTCGAAGCCCCGTAAACCGTCGAAGTGCGCCCGCGTGTCTCCG‑GCCAGATCGACCTGGTCGCCTTCACCGAAGGCGCCGAGGTCAAGaaa < 7:189875/149‑1 (MQ=255) tAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGaa > 1:195187/1‑148 (MQ=255) tAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGaa < 2:195187/148‑1 (MQ=255) aGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAgg < 4:157814/149‑1 (MQ=255) gtgtGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGc < 1:308996/149‑1 (MQ=255) cAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGCGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACctg < 1:102296/149‑1 (MQ=255) aTCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTcc < 8:191352/148‑1 (MQ=255) tCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAg < 5:230709/149‑1 (MQ=255) tCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAg < 2:69965/149‑1 (MQ=255) aacaacCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAg < 2:88508/129‑1 (MQ=255) aacaacCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAg > 1:88508/1‑129 (MQ=255) aacaacCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGt < 2:124615/141‑1 (MQ=255) aacaacCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGt > 1:124615/1‑141 (MQ=255) aacaacCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTc > 6:284086/1‑143 (MQ=255) aacaacCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTc > 8:327018/1‑143 (MQ=255) aacaacCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTCCCCCCGCGGGTCTCCC‑GCCAGATCGACCACGTCGCCGTCCACGAAGGCGCCCAGCTCAAGCAAGGCGACCTCCTCATCCCGAt > 4:215587/1‑148 (MQ=255) ccGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGAccc < 6:220175/149‑1 (MQ=255) ccGATCACCGAATGGGACGAGTTCACCGGCCACCTCGAAGCCCCGGAAACCGTCGAAGTGCGCACGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGAccc > 7:242585/1‑149 (MQ=255) cGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTcc < 3:195400/138‑1 (MQ=255) cGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTcc > 4:195400/1‑138 (MQ=255) aCCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGccc > 2:69581/1‑149 (MQ=255) aCCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGccc < 7:327018/149‑1 (MQ=255) cGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGt < 1:343860/149‑1 (MQ=255) ggACGAGTTCACCTGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAgg < 2:198737/149‑1 (MQ=255) cGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTg < 5:284086/149‑1 (MQ=255) gcgTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGCCCCGCGCCCGTTCCAGGCTg > 7:12743/3‑148 (MQ=255) aGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCCCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGaa < 5:251691/149‑1 (MQ=255) ccgccTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTACG‑GCCAGATCGAACAGGTCGACTTCACCGAAGGCGCCCAGGTCAATAAAGGCGACCTGCTGTTCCAGATCGACACGCGCCCGTTACAGGCTGAATTAcgccgc > 8:235218/1‑148 (MQ=255) gAAGCCCCGGAAACCGTCGAAGTGCTGCCGCGGGTCTCCG‑GCCAGATCGCGCAGGGCGCCTTGTCGGAAGGCGCGCAGGTCATTATTGGCGACATGGTGTTCCAGATCGACCGGCGCGAGTTCGAGGCTGTAGTCCGCCGCCTCGAAGc < 4:29703/149‑1 (MQ=255) gAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCATGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAg < 5:339045/148‑1 (MQ=255) cGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTg > 3:354060/1‑149 (MQ=255) gAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGc > 7:240010/1‑148 (MQ=255) cGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTg > 6:183237/1‑142 (MQ=255) cGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTg < 5:183237/142‑1 (MQ=255) cGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACagg > 3:299621/1‑149 (MQ=255) cGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACagg > 6:217768/1‑149 (MQ=255) gcgcCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGa > 3:177056/1‑123 (MQ=255) gcgcCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGa < 4:177056/123‑1 (MQ=255) cgcCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCAc > 8:213762/1‑149 (MQ=255) ccGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACaggccaaggc < 2:243231/143‑1 (MQ=255) ccGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACaggccaaggc > 1:243231/1‑143 (MQ=255) ccGAGGGTCTCCG‑GCCAGATCGACCACGTCGCCTTCACCGAAGGCGCCCAGTTCTAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCATTTCCAGGCTGAATTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCg < 1:132383/148‑1 (MQ=255) gTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACaggccaa > 2:191929/1‑134 (MQ=255) gTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACaggccaa < 1:191929/134‑1 (MQ=255) gCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAgcgc > 1:90748/1‑148 (MQ=255) ctttcttgACCTGGGCGCCTTCGGTGAAGGCGACCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGcc > 3:56749/8‑148 (MQ=38) ctttcttgACCTGGGCGCCTTCGGTGAAGGCGACCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGcc > 3:33606/8‑148 (MQ=38) aGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAAc < 7:213762/149‑1 (MQ=255) aTCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACg > 2:64447/1‑148 (MQ=255) aCCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGcc > 6:121847/1‑149 (MQ=255) ggTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCccgcc > 3:348786/1‑149 (MQ=255) gcGCCTTCGGTGAAGGCGACCTGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCcgcg > 2:132477/2‑61 (MQ=21) gcGCCTTCGGTGAAGGCGACCTGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCcgcg < 1:132477/60‑1 (MQ=21) ccTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGTGGc < 8:242585/149‑1 (MQ=255) catttaCCTAATGCTCCCATGTTAATAAATGCGACCTGCTTTTTCATATCGTCCCTCTCCCGTTTCATGGTGTTTTCCGCCGCCTCTAATCCCAATTTCAATATTCCAATGCCACCTTCATTCGTATCGCCAACGAAGCCCGCCGTGGc < 7:235218/144‑1 (MQ=255) cTTCACCGAAGGCGCCCAGGTCAAGAACGGCGACCTTCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGTgg < 7:317541/147‑1 (MQ=255) cACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGTGGCGa < 1:64447/147‑1 (MQ=255) cACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGTGGCGAgc > 2:223289/1‑149 (MQ=255) aCCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGTGGCGAgc < 1:69581/148‑1 (MQ=255) cGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGTGGCGAGCGcc > 7:227404/1‑149 (MQ=255) | CTCCCGCTGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCG‑GCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGTGGCGAGCGCC > NC_002947/3877006‑3877299 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |