| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,886,982 | T→C | 5.9% | H292R (CAC→CGC) | PP_3430 ← | two‑component system sensor histidine kinase/response regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,886,982 | 0 | T | C | 5.9% | 199.3 / 2.1 | 67 | H292R (CAC→CGC) | PP_3430 | two‑component system sensor histidine kinase/response regulator |
| Reads supporting (aligned to +/- strand): ref base T (32/31); new base C (2/2); total (34/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.78e-01 | |||||||||||
CCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACT‑‑G‑CCAATCGTACTTCGGTACGCTCTGTCGGGTGCACCAGCTCCATCACCGACATCGCCTGCACCTGCTCTTGTG > NC_002947/3886836‑3887129 | ccgccAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTgg > 6:101024/1‑149 (MQ=255)ccgccAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTgg < 1:310274/149‑1 (MQ=255) cgccAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGt < 4:306523/149‑1 (MQ=255) aaCTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGt > 4:315277/1‑148 (MQ=255) aaCTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTg < 2:84209/149‑1 (MQ=255) cccACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCGTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCGGCCGG‑CAAACCTCGCACTCCCACGAATCGAGTGGTAGTGACCATc > 4:251646/1‑149 (MQ=255) cccACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCACGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATc > 3:364501/1‑149 (MQ=255) ccaccaCCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTTCCCGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATcg > 5:261613/1‑149 (MQ=255) ccaccaCCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTTCACGGAACTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCAAACGAAACCAGTGGTAGTGACAATc > 1:111136/1‑149 (MQ=255) ccaccaCCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATcg > 5:165200/1‑149 (MQ=255) tCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGAt > 6:188015/1‑149 (MQ=255) tCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTTCACGG‑TCTGCGGTCATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGAt > 3:312454/1‑149 (MQ=255) tcTGTTGTTCATCATCGCCTCTGCCTGACGCGCAGCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGTCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGAt < 8:335762/146‑1 (MQ=255) cTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGAtctc < 2:111136/149‑1 (MQ=255) tgCATCAGCGCCTCTGCCTGACGCGCAGCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAgctg > 5:6046/1‑149 (MQ=255) aTCAGCGCCTCTGCCTGACGCGCAGCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCg < 1:218385/134‑1 (MQ=255) aTCAGCGCCTCTGCCTGACGCGCAGCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCg > 2:218385/1‑134 (MQ=255) aTCAGCGCCTCTGCCTGACGCGCAGCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTc > 6:207788/1‑149 (MQ=255) tCAGCGCCTCTGCCTGACGCGCAGCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTcc > 7:105447/1‑149 (MQ=255) gcgcCTCTGCCTGACGCGCAGCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCcgcg > 4:118103/1‑149 (MQ=255) gcCTCTGCCTGACGCGCAGCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTg < 1:149588/149‑1 (MQ=255) ccTCTGCCTGACGCGCAGCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTgg > 7:263645/1‑149 (MQ=255) tGACGCGCAGCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGCGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCAtt > 2:349299/1‑148 (MQ=255) tGACGCGCAGCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGCGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCAtt > 2:343600/1‑148 (MQ=255) aCGCGCAGCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTgg < 3:28267/148‑1 (MQ=255) aCGCGCAGCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGCGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCAtt < 1:343600/146‑1 (MQ=255) aCGCGCAGCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGCGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCAtt < 1:349299/146‑1 (MQ=255) aCGCGCAGCCGCTTCACGG‑TCTGCGGTGCTGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGG‑CAAACCTCGCACTCCAACGAACCCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTg < 8:121924/147‑1 (MQ=255) gCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCACGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGccc > 2:274669/1‑149 (MQ=255) ctctTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCgg < 3:315277/149‑1 (MQ=255) ttCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGa < 5:101024/147‑1 (MQ=255) ttCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGa < 6:6046/147‑1 (MQ=255) cGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACT‑‑G‑c > 5:138759/1‑149 (MQ=255) gg‑TATGCGTTGATGTCCCGGCCAACCGCCGTCAGGAGGCTTCCGT‑CAAACCTCGCACTCCAACGAAACCCGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACT‑‑G‑cc < 4:296241/149‑1 (MQ=255) ggTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGt > 1:42583/1‑113 (MQ=255) ggTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGt < 2:42583/113‑1 (MQ=255) ggTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACT‑‑G‑CCAATCGTa < 7:120480/149‑1 (MQ=255) ggTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACT‑‑G‑CCAATCGTa < 5:188015/149‑1 (MQ=255) tGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACT‑‑G‑CCAATCGTACt < 5:207788/149‑1 (MQ=255) ccGGCCAACCGCCGTCAGGAGGCTGCCGTACAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGAt > 1:218905/1‑88 (MQ=255) ccGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGAt < 2:218905/87‑1 (MQ=255) ccGGCCAACCGCCGTCAGGAGGCTGCAGT‑CAAACCTCGCACTCCAACGAAACCAGTCGTAGTGACCATCGCGGTGGCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACT‑‑G‑CCAATCGTACTTCGGTa < 2:286983/148‑1 (MQ=255) cGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACT‑‑G‑CCAATCGTACTTCGGTACg > 6:340987/1‑149 (MQ=255) aaCCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACT‑‑G‑CCAATCGTACTTCGGTACGCTCTg > 1:54688/1‑149 (MQ=255) agccgTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGCAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCAATGGAACAGCCCGGACACT‑‑G‑CCAATCGTACTTCGCTACGCTCTGTCg > 6:293242/2‑149 (MQ=255) ccgTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCGCGGACACT‑‑G‑CCAATCGTACTTCGGTACGCTCTGTCggg < 4:312454/149‑1 (MQ=255) tCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACT‑‑G‑CCAATCGTACTTCGGTACGCTCTGTCGGGTGc < 5:29004/149‑1 (MQ=255) aggtggCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACT‑‑G‑CCAATCGTACTTCGGTACGCTCTGTCGGGTGCa < 8:263645/148‑1 (MQ=255) tGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACT‑‑G‑CCAATCGTACTTCGGTACGCTCTGTCGGGTGCACCAGCTc > 2:8751/1‑148 (MQ=255) gCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGa > 1:129503/1‑102 (MQ=255) gCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGa < 2:129503/102‑1 (MQ=255) gCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACT‑‑G‑CCAAt < 2:70680/112‑1 (MQ=255) gCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACT‑‑G‑CCAAt > 1:70680/1‑112 (MQ=255) gT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTACTCCGCGTGGCTGCATTGGAACAGCCCGGACACT‑‑G‑CCAATCGTACTTCGGTACGCTCTGTCGGGTGCACCAGCTCCATCa > 7:700/1‑149 (MQ=255) cAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACT‑‑G‑CCAATCGTACTTCGGTACGCTCTGTCGGGTGCACCAGCTCCATCAcc > 6:381120/1‑149 (MQ=255) cTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACT‑‑G‑CCAATCGTACTTCGGTACGCTCTGTCGGGTGCACCAGCTCCATCACCGACAt > 5:135176/1‑149 (MQ=255) cTCGCACTCCAACGAAACCAGTGGTAGTGACCATCACGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACT‑‑G‑CCAATCGTACTTCGGTACGCTCTGTCGGGTGCACCAGCTCCATCACCGACAt < 1:274669/149‑1 (MQ=255) tCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACT‑‑G‑CCAATCGTACTTCGGTACGCTCTGTCGGGTGCAc > 8:17607/1‑130 (MQ=255) tCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACT‑‑G‑CCAATCGTACTTCGGTACGCTCTGTCGGGTGCAc < 7:17607/130‑1 (MQ=255) tCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACT‑‑G‑CCAATCGTACTTCGGTACGCTCTGTCGGGTGCACCAGCTCCATCACCGACATc > 8:92180/1‑149 (MQ=255) aCTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAATGGGGGGGGAACTAGGAGGAATAGAAATTCGATACGCTCTGTCGGGTGCACCAGCACAATCCCCGAAATcc > 1:121060/1‑148 (MQ=255) cAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACT‑‑G‑CCAATCGTACTTCGGTACGCTCTGTCGGGTGCACTAGCTCCATCACCGACATCGCCTGCAc < 1:8751/149‑1 (MQ=255) aaCCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTGCAGCTGCTCCGCGTGGCTGCATTGTACCAGCCCGGACACT‑‑C‑CCAATCGTACTTCTGTACGCTCTGTCGGGTGCACCAGCTCCATCACCGACATCGCCTGCACCTGctc < 7:163040/149‑1 (MQ=255) aaCCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGCCACT‑‑G‑CCAATCGTACTTCGGTCCGCTCTGTCGGGTGCACCAGCTCCATCCCCGCCAACGCCTGCCCCTGctc > 8:190456/1‑149 (MQ=255) acccttGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCCCGTGGCTGCATTGGAACAGCCCTGACACT‑‑G‑CCAATCGTACTTCGGTACGGTCTGTCGGGGGCACCAGGTCCATCACGTACATCTCCTGCACCTGctct < 5:293242/144‑1 (MQ=255) aGTGGTAGTTACCATCGCGGTGTCGCAGGCGGATGTCCTGCTTCTCCGCGTGGCTGCATTGGAACAGCCCTGACACT‑‑G‑CCAATCGTACTTCGGTACGCTCTGTCGGGTGCACCAGCTCCATCACCGACATCGCCTGCACCTGCTCTtgt < 6:165200/149‑1 (MQ=255) aGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACT‑‑G‑CCAATCGTACTTCGGTACGCTCTGTCGGGTGCACCAGCTCCATCACCGACATCGCCTGCACCTGCTCTtgt < 3:118103/149‑1 (MQ=255) gTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAAGAGCCCTGACACT‑‑G‑CCAATCGTACTTCTGTACGCTCTGTCGGGTGAACCAGCTCCATCACCGACATCGCCTGCACCTGCTCTtgtg < 4:364501/149‑1 (MQ=255) | CCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTTCACGG‑TCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGT‑CAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACT‑‑G‑CCAATCGTACTTCGGTACGCTCTGTCGGGTGCACCAGCTCCATCACCGACATCGCCTGCACCTGCTCTTGTG > NC_002947/3886836‑3887129 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |