New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2301453 =	0 (0.000)	41 (1.280)	34/284	0.1	100%	intergenic (‑97/‑234)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	2925429 =	NA (NA)					intergenic (‑177/+388)	PP_2563/PP_2564	antibiotic biosynthesis protein/quercetin 2,3‑dioxygenase

TGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2301600‑2301453 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCAATGC  >  NC_002947/2925429‑2925575                                                                                                                                                                                                                                                                                                         TGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAG                                                                                                                                                     <  1:111116/148‑1           GCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGC                                                                                                                                           >  6:46695/1‑148                 TCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCC                                                                                                                                     <  3:145361/148‑1                      GTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGCCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCT                                                                                                                                <  7:1489/148‑1                                      CCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGC                                                                                                                 >  8:109472/1‑147                                        GCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAA                                                                                                              <  2:153281/148‑1                                        GCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAA                                                                                                              >  1:40301/1‑148                                         CGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAAC                                                                                                             <  4:68044/148‑1                                             CACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGA                                                                                                         <  2:13793/148‑1                                                           GTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACG                                                                                              >  8:13870/1‑145                                                             GCCATGGACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCGAACAGGATGCGCATGACGTCAGA                                                                                         <  3:49865/148‑1                                                               CATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATC                                                                                       >  2:64524/1‑148                                                                 TGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGCCGTCAGATCTG                                                                                     >  7:85380/1‑148                                                                    ACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCA                                                                                   <  6:129627/147‑1                                                                                TCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGAT                                                                      >  6:160471/1‑148                                                                                   TCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTA                                                                   <  6:127626/148‑1                                                                                        GGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAA                                                              <  7:62187/148‑1                                                                                        GGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAA                                                              <  7:1952/148‑1                                                                                           ACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCA                                                           >  6:22393/1‑148                                                                                                   TCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGA                                                   >  1:85969/1‑148                                                                                                      CACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACT                                                 <  2:83396/147‑1                                                                                                           GGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCG                                           >  8:875/1‑148                                                                                                           GGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCG                                           <  5:42357/148‑1                                                                                                               CCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACTTCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTA                                       >  6:118344/1‑148                                                                                                                CTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAG                                      >  1:8933/1‑148                                                                                                                CTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTA                                       <  2:40301/147‑1                                                                                                                 TGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGG                                     >  6:93394/1‑148                                                                                                                    TAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCA                                  >  2:56912/1‑148                                                                                                                           GTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCC                            >  4:54592/1‑147                                                                                                                                TGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATAC                      >  7:17295/1‑148                                                                                                                                 GATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGCTCCGGGTAGGTCAGCCGCCGAATACT                     >  7:12247/1‑148                                                                                                                                 GATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACT                     <  4:30581/148‑1                                                                                                                                   TGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTT                   <  1:84079/148‑1                                                                                                                                   TGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTT                    <  3:174586/147‑1                                                                                                                                    GCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTG                  <  6:137995/148‑1                                                                                                                                       ttttcaaATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTA               >  5:140699/8‑148                                                                                                                                         GTTCTATGAGAGATCACTCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATG             <  8:80022/148‑1                                                                                                                                         GTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATG             <  2:138356/148‑1                                                                                                                                              ATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTC         <  3:79043/147‑1                                                                                                                                               TGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCC        <  4:54351/147‑1                                                                                                                                                GAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCA      >  3:158660/1‑148                                                                                                                                                 AGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCAA     >  1:119401/1‑148                                                                                                                                                  GAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCAAT    <  6:79556/148‑1                                                                                                                                                  GAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCAAT    >  4:92378/1‑148                                                                                                                                                  GAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCAAT    >  8:134487/1‑148                                                                                                                                                  GAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCAAT    <  1:150420/148‑1                                                                                                                                                  GAGATCACCCAGCCCTTCCGGGCTGCGCGGTCGCACAGCAAACAGGATGCGCAGGACGTCAGAGCTGCACTGACATCGAGATCTAGAACAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCAA     <  5:81829/147‑1                                                                                                                                                  GAGATCACCCAGCCCTTACGGGCTGCGGTGTCGCACAGCAATCAGGATGCGCATGACGTCAGATCTGGACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCAAT    >  1:95729/1‑148                                                                                                                                                    GATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGCTCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCAATGC  >  4:54801/1‑148                                                                                                                                                    GATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCAATGC  <  2:135594/148‑1                                                                                                                                                    GATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTT                   >  7:122029/1‑131                                                                                                                                                    GATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTAAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCAATGC  >  8:170358/1‑148                                                                                                                                                                                                                                                                                                         TGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2301600‑2301453 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCAATGC  >  NC_002947/2925429‑2925575

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.