| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_002947 | 5,681,415 | +CGGG | intergenic (‑133/+71) | PP_4986 ← / ← PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5681415 | 3 (0.090) | 14 (0.440) +CGGG |
13/282 | 1.6 | 82.8% | intergenic (‑133/+71) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| ? | NC_002947 | 5681416 = | 3 (0.090) | intergenic (‑134/+70) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein | |||||
GTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGC > NC_002947/5681274‑5681555 | gTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCCGGCTTTCATTGCCACTGCATGAACCGCcggggc > 3:68956‑M1/1‑142 (MQ=255) tAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggc > 8:65985‑M1/1‑141 (MQ=255) aaTACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggct < 7:65985‑M1/147‑8 (MQ=255) aaTACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCGTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCACGCTGTCATTGCCCCTGCATGACCCGCcggggggg > 3:155503‑M1/1‑140 (MQ=255) aTGAAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCATGTTTAGCGAAAGGGGCGCCAAGCGGCCCCAGGCGTTAAATGCCACAGCAAGAAACGCcggggcagattcg > 2:129310‑M1/1‑135 (MQ=255) gCAAACACAGACCTCCTGAGGGGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgca < 4:38686‑M1/148‑16 (MQ=255) aCCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGACAGGGGCGCGCAGCGGCCCCAGGCTTTGATTGCCCCGGCATGAACCGCcggggctgctgcgccgcccgatcgc > 7:93827‑M1/1‑123 (MQ=255) cctGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgca < 4:70607‑M1/134‑16 (MQ=255) gCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgccgccctatagcgacaccaggccgcg > 7:113768‑M1/1‑109 (MQ=255) gtGGGTGCGTGTTGTGATGGTGATGGCTTCGTTGTTGGTGGGCGCGGCCTTGTGTCGCTAATGGGGCGCTAAGCGGCCCCAGGCTTTCATTGCCACTGAATGACCCGCCGGGGCTGCTGCGCAGCCCTATCGCTACACAAGGCCGCTc < 8:113768/147‑1 (MQ=255) ttttGGTTTCGTTCTTTGTGGCTGGGGCGTTGTGTCGCTAATGGGGCGGTATGGGCCCCCTGGATTTCTTTCCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTAGGGCCAAACATGGCCGCTCCCACTCCAGACCACCAGGcc < 4:50946/145‑1 (MQ=255) gcgagAAGGGGGCGCTAAGGGGCCCCAGGGTTTCATGGCCACTGCATCACCCGCCGGGGCGGGGGCGCAGCCGTAGCGCCACAAACGCCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCa < 7:123793/144‑1 (MQ=255) acggggccccTGGCTTTCATTGCCCCGGCATCACCCGCcgggggtggggggcagccctatcgcgacacatggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcac < 2:26552‑M1/144‑111 (MQ=255) ctggctTTCTTTGCCATTGCATGACCCGCggggggtgcggcgcagccctatcgctaaaaatggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttc < 8:93827‑M1/146‑120 (MQ=255) tccttgaacCGCcgggggtgcggggcagccctagcgccaaacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgaccaggtccg < 7:98492‑M1/144‑137 (MQ=255) aaCCGCgtgggcggctgcgcagccctagcgcgaaacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatcctcgtcacgcaccagcctttccaatgcgaccaggtccggtac < 4:174732‑M1/146‑141 (MQ=255) ccgccggggctgctgcgcagccctatcgcgacacaagcccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgaccaggtccggtacccgc < 8:159885‑M1/148‑145 (MQ=255) | GTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGC > NC_002947/5681274‑5681555 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |