New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2103125 = | 17 (0.520) | 10 (0.310) +TT |
6/286 | 3.3 | 40.3% | intergenic (+85/‑1) | PP_t23/PP_t24 | tRNA‑Gly/tRNA‑Gly |
? | NC_002947 | = 2242002 | 13 (0.400) | noncoding (76/76 nt) | PP_t28 | tRNA‑Glu | |||||
Rejected: Coverage evenness skew score above cutoff. |
TCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACTTTTCCTGCGTTTTGCAGGGCTTAAAAAGGCTCGTCGATTATTGATGAGCCTTTTGTTTCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCATTT > NC_002947/2241863‑2242142 | gcGAGCCCGCTTAGCTCCACCAATTTTGCCGCGGTGCGCGTTAGCGGATCGGCACGAAGGTTACGGCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACTTTTCCt < 4:131691/147‑1 (MQ=255) ttAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACTTTTCCTGCGTTTTGCa < 8:27932/148‑1 (MQ=255) caATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACTTTTCCTGCGTTTTGCAGGGCTTaa > 3:98352/1‑146 (MQ=255) cgcgGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACGGCCGTTTTCAGGGAATTTAAAGGCtcata > 4:174137/1‑145 (MQ=11) ggATCGGCACGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGCGTCCCCTAGGGGACGCCACTTTTCCTGCGTTTTGCAGGGCTTAAAAAGGCTCGTCGATTATTGATGAGCCt > 8:49402/1‑148 (MQ=255) tagaCGAAGGGGACGTAACCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACTTTTCCTGCGTTTTGCAGGGCTTAAAAAGGCTCGTCGATTATTGATGAGCCTTTTGt > 7:58024/4‑148 (MQ=21) aCGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACTTTTCCTGCGTTTTGCAGGGCTTAAAAAGGCTCGTCGATTATTGATGAGCCTTTTGTTTc > 5:122915/1‑148 (MQ=255) cGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACTTTTCCTGCGTTTTGCAGGGCTTAAAAAGGCTCGTCGATTATTGATGAGCCTTTTGTTTCg < 3:96226/148‑1 (MQ=255) cTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACTTTTCCTGCGTTTTGCAGGGCTTAAAAATGCt > 6:33082/1‑104 (MQ=255) ccTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACTTTTCCTGCGTTTTGCAGGGCTTAAAAAGGCTCGTCGATTATTGATGAGCCTTTTGTTTCGGGGCTATAGCTCAGCTGGGAGAGCGCCt < 8:58024/148‑1 (MQ=255) cACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACTTTTCCTGCGTTTTGCAGGGCTTAAAAAGGCTCGTCGATTATTCATGAGCCTTTTGTTTCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCaggag < 7:21848/146‑1 (MQ=255) tCCCCTAGGGGACGCCACTTTTCCTGCGTTTTGCAGGGCTTAAAAAGGCTCGTCGATTATTGATGAGCCTTTTGTTTCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATAACGCTTAgat > 7:20203/1‑146 (MQ=255) ggACGCCACTTTTCCTGCGTTTTGCAGGGCTTAAAAAGGCTCGTCGATTATTGATGAGCCTTTTGTTTCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAttt < 7:49402/148‑1 (MQ=255) | TCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACTTTTCCTGCGTTTTGCAGGGCTTAAAAAGGCTCGTCGATTATTGATGAGCCTTTTGTTTCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCATTT > NC_002947/2241863‑2242142 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |