New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4065591	27 (0.820)	5 (0.160)	5/282	3.6	14.9%	coding (369/1491 nt)	PP_3582	RND transporter outer membrane protein
	?	NC_002947	= 4065640	31 (0.970)					coding (320/1491 nt)	PP_3582	RND transporter outer membrane protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTTGTAGGTGTTGCGAATGCCGCTGCTGTTATTGGACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGACCAGCGCATTGAGCCCAGCATCGCCGTAGATTTCCCACCAGGCGCCGCGGGCGATGGCGTCGGACGGCGAGGCCTGGGTCCAGC  >  NC_002947/4065498‑4065784                                                                                                                                               |                                                                                                                                                 gTTGTAGGTGTTGCGAATGCCGCTGCTGTTATTGGACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCgcctgggcctgg                                                                                                                                             <  6:68174/148‑1 (MQ=255)         tgtTGCGAATGCCGCTGCTGTTATTGGACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTg                                                                                                                                     >  3:99080/1‑148 (MQ=255)                  tGCCGCTGCTGTTATTGGACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGa                                                                                                                            >  6:93950/1‑148 (MQ=255)                           tgTTATTGGACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCAc                                                                                                                   >  5:172302/1‑148 (MQ=255)                                  ggACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCACACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTg                                                                                                             <  1:134632/147‑1 (MQ=255)                                   gACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGt                                                                                                           >  5:62174/1‑148 (MQ=255)                                    aCAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGtt                                                                                                          <  2:111596/148‑1 (MQ=255)                                            gAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGt                                                                                                  <  5:122544/148‑1 (MQ=255)                                             aaCTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGtt                                                                                                 <  3:38025/148‑1 (MQ=255)                                                tGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAg                                                                                              >  6:62970/1‑148 (MQ=255)                                                     cTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCtt                                                                                         >  4:71412/1‑148 (MQ=255)                                                      tGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTc                                                                                        >  4:161457/1‑148 (MQ=255)                                                         cGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCg                                                                                       <  8:58948/146‑1 (MQ=255)                                                         cGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGAc                                                                                     <  7:123740/148‑1 (MQ=255)                                                                    gcCGAGCGGTTCTTGCTGGTGCTCAGGGCCAGGCTGGGGAACAGCGCCGCACGGCGGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCGCTTCGACCAGCGCAtt                                                                            <  1:112847/146‑1 (MQ=255)                                                                     ccGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGACCAGCGCATTGAg                                                                         >  1:85827/1‑148 (MQ=255)                                                                             ttCTTGCTGGTGCTCAGGTCCAGGCTGGGGGACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGACCAGCGCATTGAGCCCAGCAt                                                                 >  3:103950/1‑148 (MQ=255)                                                                                          tCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGACCAGCGCATTGAGCCCAGCATCGCCGTAGATTTc                                                    >  3:166697/1‑148 (MQ=255)                                                                                              gTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGACCAGCGCATTGAGCCCAGCATCGCCGTAGATTTCcca                                                 >  4:65185/1‑147 (MQ=255)                                                                                               tCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGACCAGCGCATTGAGCCCAGCATCGCCGTAGATTTCccacc                                               <  5:159755/148‑1 (MQ=255)                                                                                                    gCTGGGGAACAGCGCCGCACGGTTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGACCAGCGCATTGAGCCCAGCATCGCCGTAGATTTCCCACCAGgcg                                          >  4:34032/1‑148 (MQ=255)                                                                                                      tGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGACCAGCGCATTGAGCCCAGCATCGCCGTAGATTTCCCACCAGGcgcc                                        >  5:50991/1‑148 (MQ=255)                                                                                                         ggAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGACCAGCGCATTGAGCCCAGCATCGCCGTAGATTTCCCACCAGGCGCcgcg                                     >  4:358/1‑148 (MQ=255)                                                                                                          gAACAGCGCCGCACGGCTGCTGCGCACCAGCGCGTGGGCCTGGCGATTCTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGACCAGCGCATTGAGCCCAGCATCGCCGTAGATTTCCCACCAGGCGCCGCgg                                    <  6:13197/148‑1 (MQ=255)                                                                                                              aGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGACCAGCGCATTGAGCCCAGCATCGCCGTAGATTTCCCACCAGGCGCCGCGGGCGa                                >  7:113035/1‑148 (MQ=255)                                                                                                              aGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGACCAGCGCATTGAGCCCAGCATCGCCGTAGATTTCCCACCAGGCGCCGCGGGCGa                                <  8:102662/148‑1 (MQ=255)                                                                                                                 gccgcACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGACCAGCGCATTGAGCCCAGCATCGCCGTAGATTTCCCACCAGGCGCCGCGGGCGATgg                             <  4:146617/148‑1 (MQ=255)                                                                                                                             ctgcGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGCCCCGCGCATTGAGCCCAGCATCGCCGTAGATTTCCCACCAGGCGCCGCGGGCGATGGCGTCGGACgg                   >  7:112397/1‑146 (MQ=255)                                                                                                                                     cAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGACCAGCGCATTGAGCCCAGCATCGCCGTAGATTTCCCACCAGGCGCCGCGGGCGATGGCGTCGGACGGCGAGGCCTgg         >  5:11047/1‑148 (MQ=255)                                                                                                                                           ctgggcctggCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGACCAGCGCATTGAGCCCAGCATCGCCGTAGATTTCCCACCAGGCGCCGCGGGCGATGGCGTCGGACGGCGAGGCCTGGGTCCAg   <  4:99080/148‑1 (MQ=255)                                                                                                                                            tgggcctggCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGACCAGCGCATTGAGCCCAGCATCGCCGTAGATTTCCCACCAGGCGCCGCGGGCGATGGCGTCGGACGGCGAGGCCTGGGTCCAGc  >  6:12938/1‑148 (MQ=255)                                                                                                                                               |                                                                                                                                                 GTTGTAGGTGTTGCGAATGCCGCTGCTGTTATTGGACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGACCAGCGCATTGAGCCCAGCATCGCCGTAGATTTCCCACCAGGCGCCGCGGGCGATGGCGTCGGACGGCGAGGCCTGGGTCCAGC  >  NC_002947/4065498‑4065784

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.