| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5545321 = | NA (NA) | 50 (0.770) | 43/266 | 0.7 | 100% | intergenic (‑461/+416) | rpsF/rlmB | 30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB |
| ? | NC_002947 | = 5621245 | 0 (0.000) | coding (19/774 nt) | PP_4939 | hypothetical protein | |||||
Only 100 of 162 total aligned reads displayed.
GGACCTGCCGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACTC > NC_002947/5545173‑5545466 | ggACCTGCCGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGtctt < 1:318287/149‑1 (MQ=11) ccTGCCGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTa < 8:282576/149‑1 (MQ=32) ccGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATca > 3:173604/1‑148 (MQ=35) ccGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATca > 6:147755/1‑148 (MQ=35) cGGTCTTGGCTTCTGGCTTCGACCTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATcaaa < 4:315625/149‑1 (MQ=37) cGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATcaaa < 4:321050/149‑1 (MQ=37) tCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATcaaacaa < 3:354546/149‑1 (MQ=39) ttGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGtcttct < 1:267109/138‑1 (MQ=32) ttGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGtcttct > 2:267109/1‑138 (MQ=32) tggcttctggcttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACaaaa < 6:398964/148‑1 (MQ=40) ggcttctggcttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATcaaacaaa < 5:373046/146‑1 (MQ=40) ggcttctggcttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATcaaacaaa < 8:153571/146‑1 (MQ=40) ggcttctggcttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACaaaa < 8:288449/147‑1 (MQ=40) gcttctggcttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGa < 5:212993/148‑1 (MQ=255) cttctggcttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGAt > 3:239475/1‑148 (MQ=255) tggcttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAAcc > 4:125665/1‑148 (MQ=255) gcttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTGGACCATTCGAGTCAGTCTTCTATCAAACAAAAGATAAccc > 1:132426/1‑148 (MQ=255) cttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACt > 5:274281/1‑149 (MQ=255) ttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAAcc < 5:296244/144‑1 (MQ=255) cGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGt > 5:317289/1‑148 (MQ=255) gAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttc > 6:327205/1‑149 (MQ=255) aaCTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttct > 8:240326/1‑149 (MQ=255) aaCTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttct < 5:143547/149‑1 (MQ=255) aCTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttctt < 3:125665/149‑1 (MQ=255) ctcAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttctttc > 8:65949/1‑147 (MQ=255) ctcAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttctttc > 5:28297/1‑147 (MQ=255) ctcAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTa < 4:106799/149‑1 (MQ=255) tcAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttctttagat > 7:363657/1‑145 (MQ=255) tcAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttctt < 8:363657/144‑1 (MQ=255) aaGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGc > 6:292279/1‑148 (MQ=255) aaGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGc < 5:147755/148‑1 (MQ=255) aaGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGc < 3:122889/148‑1 (MQ=255) aaGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGc > 2:324321/1‑148 (MQ=255) gACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATcaaa > 2:349410/1‑118 (MQ=39) gACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttctt > 5:17964/1‑140 (MQ=255) cTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttcttt < 4:8169/138‑1 (MQ=255) cTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGATTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttct > 4:102862/1‑136 (MQ=255) ttGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGaaaaa > 1:304003/1‑148 (MQ=255) ttCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACa < 6:274281/149‑1 (MQ=255) cAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAg < 4:173604/148‑1 (MQ=255) aaCATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGgc > 5:115624/1‑149 (MQ=255) aaCATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGgc < 1:20659/149‑1 (MQ=255) aTAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGATTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGgcgcg < 4:239475/149‑1 (MQ=255) aTAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGgcgcg > 8:187131/1‑149 (MQ=255) aGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGcgcgcg < 2:396894/148‑1 (MQ=255) aGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCgg < 7:65949/149‑1 (MQ=255) aGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCgg < 6:317289/149‑1 (MQ=255) gCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCggg < 5:327205/149‑1 (MQ=255) cTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGt > 8:3990/1‑149 (MQ=255) cttGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATg < 3:69533/148‑1 (MQ=255) ttGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttcttt < 5:135985/115‑1 (MQ=255) ggTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATggcgg > 7:77357/1‑149 (MQ=255) cAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAgt > 3:379693/1‑149 (MQ=255) aGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAgtg < 4:28043/149‑1 (MQ=255) aGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAgtg > 2:92249/1‑149 (MQ=255) gTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATaa > 2:242844/1‑91 (MQ=255) gTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAgtgt > 8:137002/1‑148 (MQ=255) gTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGtt > 5:245752/1‑149 (MQ=255) gTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCCCTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCAc > 4:277491/1‑149 (MQ=255) gTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCa < 4:379693/148‑1 (MQ=255) tACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAAccc < 2:195757/90‑1 (MQ=255) tACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAAccc > 1:195757/1‑90 (MQ=255) acacCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAATAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCAct < 6:28297/148‑1 (MQ=255) acCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAgtgt < 3:214240/141‑1 (MQ=255) ccAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCgg < 6:202767/120‑1 (MQ=255) ccAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCgg > 3:294879/1‑120 (MQ=255) cAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACtcttc > 1:107453/1‑148 (MQ=255) cAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACtcttc > 5:210493/1‑148 (MQ=255) aGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGTCGAAGTGTTCACTCTTCta < 6:105208/149‑1 (MQ=255) aGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCta < 7:3990/149‑1 (MQ=255) gACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCta > 3:367812/1‑148 (MQ=255) ccAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACGCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTGAATGGCGGCGAAGTGTTCACTCTTCTATTCGTgg < 6:115624/149‑1 (MQ=255) ccAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGgcggcg > 2:217848/1‑125 (MQ=255) aaCTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAACGGCGGCGAAgt > 2:46995/1‑127 (MQ=255) aaCTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAACGGCGGCGAAgt < 1:46995/127‑1 (MQ=255) aCTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTca < 2:132426/149‑1 (MQ=255) tGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTc < 1:383593/128‑1 (MQ=255) tGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTccat > 3:27528/1‑146 (MQ=255) tGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTca > 6:273569/1‑147 (MQ=255) aTGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGc < 6:356521/149‑1 (MQ=255) cgcAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCaa < 8:77357/148‑1 (MQ=255) gcAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAAc > 4:184456/1‑90 (MQ=255) gcAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGc > 1:243075/1‑149 (MQ=255) gCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAACAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGc < 4:38440/148‑1 (MQ=255) gCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGc < 7:240326/148‑1 (MQ=255) cTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGcc > 1:397844/1‑148 (MQ=255) tttGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGa > 8:234116/1‑149 (MQ=255) tGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGa < 2:107453/147‑1 (MQ=255) aTGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGAGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAgg > 5:383082/1‑149 (MQ=255) tGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAggg < 7:89098/149‑1 (MQ=255) tGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAggg < 4:367812/149‑1 (MQ=255) ggT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAgg > 7:86483/1‑138 (MQ=255) gT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAggg > 3:390650/1‑138 (MQ=255) tCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGc > 6:172442/1‑149 (MQ=255) aTTCGAGTCAGTCTTCTATCAAACAAATGATAACCCACTGTTCTTTCTa < 6:141497/49‑1 (MQ=255) aTTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACa > 6:413747/1‑129 (MQ=40) ttCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCAtt > 1:226012/1‑149 (MQ=38) cGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCAttt < 7:234116/148‑1 (MQ=37) agtcagtcTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTggg < 3:277491/149‑1 (MQ=35) gtcagtcTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGc < 7:187131/149‑1 (MQ=34) | GGACCTGCCGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGT‑ATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACTC > NC_002947/5545173‑5545466 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |