| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 4,635,709 | C→T | G16D (GGT→GAT) | uvrY ← | BarA/UvrY two‑componenent system response regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,635,709 | 0 | C | T | 100.0% | 59.6 / NA | 18 | G16D (GGT→GAT) | uvrY | BarA/UvrY two‑componenent system response regulator |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (6/12); total (6/12) | |||||||||||
CAGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAGGCCGTCGATGTCGGCCAACATCCGTGTAATACCGGTTCGTACCAGATCGTGATCATCGACCACTAAGACCCTAATCAAGCACACACCTCGTCAGCAGGGCGATTGGATCCCGCCACCTTAACAAAATTTTTCACGGTGGGCCTAACGCATTGCTTCCTTCAGAA > NC_002947/4635567‑4635841 | cAGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAGGCCGTCGATGTCGGCCAACATCCGTGTAATATCGGt > 3:113932/1‑147 (MQ=255) ccgccgATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAGGCCGTCGATGTCGGCCAACATCCGTGTAATATCGGTTCGt > 6:219629/1‑147 (MQ=255) ccgATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTTCCTCACCCACCACCTGCAGGCCGTCGATGTCGGCCAACATCCGTGTAATATCGGTTCGTAcc < 4:62002/147‑1 (MQ=255) gggCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAGGCCGTCGATGTCGGCCAACATCCGTGTAATATCGGTTCGTACCAGATCGTg > 3:198027/1‑147 (MQ=255) gggCACTTTCACATCCATCAGCACAACGTCCGCTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGTAATCTCCCTCACCCACCACCTGCAGGCCGTCGATGTCGGCCAACATCCGTGTAATATCGGTTCGTACCAGATCGTg < 8:194863/147‑1 (MQ=255) acaTCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAGGCCGTCGATGTCGGCCAACATCCGTGTAATATCGGTTCGTACCAGATCGTGATCATCGAc < 5:219629/146‑1 (MQ=255) tccatcAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAGGCCGTCGATGTCGGCCAACATCCGTGTAATATCGGTTCGTACCAGATCGTGATCATCGACCACt < 7:211476/147‑1 (MQ=255) ccatcAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAGGCCGTCGATGTCGGCCAACATCCATGTAATATCGGTTCGTACCAGATCGTGATCATCGACCACTa < 3:235127/147‑1 (MQ=255) atcAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAGGCCGTCGATGTCGGCCAACATCCGTGTAATATCGGTTCGTACCAGATCGTGATCATCGACCACTAAg < 3:167799/147‑1 (MQ=255) aCGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAGGCCGTCGATGTCGGCCAACATCCGTGTAATATCGGTTCGTACCAGATCGTGATCATCGACCACTAAGACCCTAAt > 5:27579/1‑146 (MQ=255) aCGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAGGCCGTCGATGTCGGCCAACATCCGTGTAATATCGGTTCGTACCAGATCGTGATCATCGACCACTAAGACCCTAATc < 1:114062/147‑1 (MQ=255) tCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAGGCCGTCGATGTCGGCCAACATCCGTGTAATATCGGTTCGTACCAGATCGTGATCATCGACCACTAAGACCCTAATCAAGCACACACCTCGt < 6:27579/147‑1 (MQ=255) ccGGAATCTCCCTCACCCACCACCTGCAGGCCGTCGATGTCGGCCAACATCCGTGTAATATCGGTTCGTACCAGATCGTGATCATCGACCACTAAGACCCTAATCAAGCACACACCTCGTcagc < 3:46893/124‑1 (MQ=255) ccGGAATCTCCCTCACCCACCACCTGCAGGCCGTCGATGTCGGCCAACATCCGTGTAATATCGGTTCGTACCAGATCGTGATCATCGACCACTAAGACCCTAATCAAGCACACACCTCGTcagc > 4:46893/1‑124 (MQ=255) cGATGTCGGCCAACATCCGTCTAATATCGGTTCGTACCAGATCGTGATCATCGACCACTAAGACCCTAATCAAGCACACACCTCGTCAGCAGGGCGATTGGATCCCGCCACCTTCACAAAATTTTTCACGGTGGGCCTAACGCATTg < 2:15826/147‑1 (MQ=255) aTGTCGGCCAACATCCGTGTAATATCGGTTCGTACCAGATCGTGATCATCGACCACTAAGACCCTAATCAAGCACACACCTCGTCAGCAGGGCGATTGGATCCCGCCACCTTAACAAAATTTTTCACGGTGGGCCTAACGCATTGc < 5:31357/146‑1 (MQ=255) ggCCAACATCCGTGTAATATCGGTTCGTACCAGATCGTGATCATCGACCACTAAGACCCTAATCAAGCACACACCTCGTCAGCAGGGCGATTGGATCCCGCCACCTTAACAAAATTTTTCACGGTGGGCCTAACGCATTGcttcct > 3:100616/1‑146 (MQ=255) aCATCCGTGTAATATCGGTTCGTACCAGATCGTGATCATCGACCACTAAGACCCTAATCAAGCACACACCTCGTCAGCAGGGCGATTGGATCCCGCCACCTTAACAAAATTTTTCACGGTGGGCCTAACGCATTGCTTCCTTCAGaa < 5:107237/147‑1 (MQ=255) | CAGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAGGCCGTCGATGTCGGCCAACATCCGTGTAATACCGGTTCGTACCAGATCGTGATCATCGACCACTAAGACCCTAATCAAGCACACACCTCGTCAGCAGGGCGATTGGATCCCGCCACCTTAACAAAATTTTTCACGGTGGGCCTAACGCATTGCTTCCTTCAGAA > NC_002947/4635567‑4635841 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |