| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 980,280 | Δ1 bp | 6.5% | coding (54/324 nt) | iscA → | copper(I) binding iron‑sulfur cluster assembly protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 980,280 | 0 | C | . | 6.5% | 248.1 / 9.9 | 77 | coding (54/324 nt) | iscA | copper(I) binding iron‑sulfur cluster assembly protein |
| Reads supporting (aligned to +/- strand): ref base C (38/34); new base . (3/2); total (41/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.58e-01 | |||||||||||
GGTACTCGCCGAAGATGCCATCAAGGCAGCCGTACGCGACTACAAGCAGAAGAAAGGCTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGACGAAGACCAGGTGTTCGAAAACCATGGCGTCAAGGTGATCATCGATCCC > NC_002947/980132‑980424 | ggTACTCGCCGAAGATGCCATCAAGGCAGCCGTACGCGACTACAAGCAGAAGAAAGGCTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGAc < 3:57083/149‑1 (MQ=255) ccGAAGATGCCATCAAGGCAGCCGTACGCGACTACAAGCAGAAGAAAGGCTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑GAACCACATTCGCCGCTCCC‑TCGACGGGCGCgg < 1:235769/149‑1 (MQ=255) ccGAAGATGCCATCAAGGCAGCCGTACGCGACTACAAGCAGAAGAAAGGCTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCgg < 7:222943/149‑1 (MQ=255) gATGCCATCAAGGCAGCCGTACGCGACTACAAGCAGAAGAAAGGCTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCGCCCGTCGA‑GGGAGCGGCgaat < 2:302017/149‑2 (MQ=255) tGCCATCAAGGCAGCCGTACGCGACTACAAGCAGAAGAAAGGCTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGt > 8:196673/1‑149 (MQ=255) cATCAAGGCAGCCGTACGCGACTACAAGCAGAAGAAAGGCTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAg < 3:39343/149‑1 (MQ=255) aTCAAGGCAGCCGTACGCGACTACAAGCAGAAGAAAGGCTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGcgcg < 1:359255/137‑1 (MQ=255) aTCAAGGCAGCCGTACGCGACTACAAGCAGAAGAAAGGCTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGcgcg > 2:359255/1‑137 (MQ=255) aTCAAGGCAGCCGTACGCGACTACAAGCAGAAGAAAGGCTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAgg > 3:37407/1‑149 (MQ=255) aTCAAGGCAGCCGTACGCGACTACAAGCAGAAGAAAGGCTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAgg < 2:88738/149‑1 (MQ=255) aTCAAGGCAGCCGTACGCGACTACAAGCAGAAGAAAGGCTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAgg < 7:123104/149‑1 (MQ=255) tCAAGGCAGCCGTACGCGACTACAAGCAGAAGAAAGGCTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAggg > 6:73464/1‑149 (MQ=255) cAAGGCAGCCGTACGCGACTACAAGCAGAAGAAAGGCTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGcgcg < 3:48727/135‑1 (MQ=255) cAAGGCAGCCGTACGCGACTACAAGCAGAAGAAAGGCTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGcgcg > 4:48727/1‑135 (MQ=255) gCAGCCGTACGCGACTACAAGCAGAAGAAAGGCTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTc > 5:76065/1‑149 (MQ=255) cttaggcgAGTACTAGCAGAAGATAGGCTTGATCTAAGTCGCCTGTTGCAAGGTATGGAGTTCTGTTGGCTCTCAGGATGACAGAAGCCGACGC‑CAACCACATTCGCCTCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCt < 3:280101/143‑1 (MQ=255) gTACGCGACTACAAGCAGAAGAAAGGCTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTgg < 7:290984/149‑1 (MQ=255) gTACGCGACTACAAGCAGAAGAAAGCCTTGATCTACGTCGCCTGTTGCAAGGTAAGGAGGTCTGATGGCTACCAGCATGACAGAAGCCGCCCC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTgg < 4:107131/149‑1 (MQ=255) gcgACTACAAGCAGAAGAAAGGCTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGt < 1:56767/149‑1 (MQ=255) gACTACAAGCAGAAGAAAGGCTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTgc < 7:202360/149‑1 (MQ=255) aaGCAGAAGAAAGGCTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGcacca > 5:191883/1‑149 (MQ=255) cAGAAGAAAGGCTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCg > 3:288505/1‑149 (MQ=255) gaagaaAGGCTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCGCCCGTCGA‑GGGAGCGGCgaat > 2:239378/1‑113 (MQ=38) gaagaaAGGCTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCGCCCGTCGA‑GGGAGCGGCgaat < 1:239378/114‑2 (MQ=38) gaaAGGCTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGc > 6:165552/1‑149 (MQ=255) cTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGt > 6:327636/1‑149 (MQ=255) gATGTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGGGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCTCCACCGGTTGCTCgg < 3:174779/144‑1 (MQ=255) caTCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCCCCGCTCAC‑TCGACGGGCGAGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTAGCTCgggagaa > 4:174779/2‑145 (MQ=255) aTCTAAGTCGCCTGTTTCAAGGTAAGGCGTTCTGTTGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTg < 4:372943/148‑1 (MQ=255) aTCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGAAAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTgg > 7:125724/1‑149 (MQ=255) tCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGc > 5:113219/1‑149 (MQ=255) aGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGc < 4:37407/145‑1 (MQ=255) aGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTa < 6:76065/148‑1 (MQ=255) aGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTAc < 2:353731/149‑1 (MQ=255) tCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGt > 1:46232/1‑149 (MQ=255) ccTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCt < 5:288273/149‑1 (MQ=255) tGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTg > 8:341140/1‑148 (MQ=255) tGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTg > 2:327412/1‑148 (MQ=255) ttGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGaa > 4:200123/1‑149 (MQ=255) gCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAAtt > 7:18821/1‑149 (MQ=255) cAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATtc < 7:196673/149‑1 (MQ=255) cAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATtc > 3:112204/1‑149 (MQ=255) ggTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATtcgtc < 7:341140/149‑1 (MQ=255) gTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATtcgtc > 6:90676/1‑148 (MQ=255) tAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTcga > 5:33100/1‑149 (MQ=255) gTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACt > 7:168018/1‑149 (MQ=255) ttCTGATGGCTATCAGCATGACAGAAGCCGCCGCGCAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACt > 1:247201/1‑149 (MQ=255) tGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCg > 4:181407/1‑149 (MQ=255) tGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCg > 4:175468/1‑149 (MQ=255) aTGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGc < 8:168018/146‑1 (MQ=255) aTGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGa > 8:244869/1‑149 (MQ=255) aTCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCgg < 8:140114/142‑1 (MQ=255) aTCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCgg > 7:140114/1‑142 (MQ=255) tCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGACGAAGAc < 3:200123/149‑1 (MQ=255) gCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGACGAAGACCAg < 2:46232/149‑1 (MQ=255) cATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGACGAAGACCAgg > 6:32334/1‑149 (MQ=255) aTGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGACGAAGACCAGgt > 5:342015/1‑149 (MQ=255) tGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGACGAAGACCAGgtg < 1:327412/149‑1 (MQ=255) cAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGACGAAGACCAGGTGTTc > 4:151504/1‑149 (MQ=255) c‑cAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGACGAAGa > 3:230421/1‑127 (MQ=255) c‑cAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGACGAAGa < 4:230421/127‑1 (MQ=255) aaCCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGc < 7:49287/86‑1 (MQ=255) aaCCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGc > 8:49287/1‑86 (MQ=255) ctcaccTTTGCCGCGCCCGTCGA‑GGGAGCGGCGAATGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGACGAAGACCAGGTGTTCGAAAACCATGGCGt > 3:274118/3‑148 (MQ=37) tcaccTTTGCCGCGCCCGTCGA‑GGGAGCGGCGAATGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGACGAAGACCAGGTGTTCGAAAACCATGGCGTc > 7:111572/2‑148 (MQ=38) cacaTTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGACGAAGACCAGGTGTTCGAAAACCATGGCGTc > 1:295022/1‑147 (MQ=255) caTTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGACGAAGACCAGGTGTTCGAAAACCATGGCGTCAAgg < 6:191883/149‑1 (MQ=255) caTTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGACGAAGACCAGGTGTTCGAAAACCATGGCGTCAAgg < 5:90676/149‑1 (MQ=255) cgccgcTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGACGAAGACCAGGTGTTCGAAAACCATGGCGTCAAGGTGa < 6:113219/148‑1 (MQ=255) gccgcTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGACGAAGACCAGGTGTTCGAAAACCATGGCGTCAAGGTGat < 8:125724/148‑1 (MQ=255) gccgcTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGACGAAGACCAGGTGTTCGAAAACCATGGCGTCAAGGTGat > 6:314165/1‑148 (MQ=255) gcTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGACGAAGACCAGGTGTTCGAAAACCATGGCGTCAAGGTGatcatc < 5:314165/149‑1 (MQ=255) cTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGACGAAGACCCGGTGTTCGAAAACCATGGCGTCAAGGTGATCATCg > 8:283206/1‑149 (MQ=255) cc‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGACGAAGACCAGGTGTTCGAAAACCATGGCGTCAAGGTGATCATCGATc > 4:15932/1‑149 (MQ=255) c‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGACGAAGACCAGGTGTTCGAAAACCATGGCGTCAAGGTGATCATCGATcc > 4:21867/1‑149 (MQ=255) tCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGACGAAGACCAGGTGTTCGAAAACCATGGCGTCAAGGTGATCATCGATcc > 5:380766/1‑148 (MQ=255) gACGGGCGCGTCAAAGGTGAGGGCATTCTCCTGTGCGTGCTCACCACCGGTTGCTCTGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGACGAAGACCAGGTGTTCGAAAACCATGGCGTCAAGGTGATCATCGATccc < 3:281800/147‑1 (MQ=255) gACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGACGAAGACCAGGTGTTCGAAAACCATGGCGTCAAGGTGATCATCGATccc < 5:165552/147‑1 (MQ=255) | GGTACTCGCCGAAGATGCCATCAAGGCAGCCGTACGCGACTACAAGCAGAAGAAAGGCTTGATCTAAGTCGCCTGTTGCAAGGTAAGGAGTTCTGATGGCTATCAGCATGACAGAAGCCGCCGC‑CAACCACATTCGCCGCTCCC‑TCGACGGGCGCGGCAAAGGTGAGGGCATTCGCCTGGGCGTGCGCACCACCGGTTGCTCGGGTCTGGCCTACGTGCTGGAATTCGTCGACGAACTGGCGGACGAAGACCAGGTGTTCGAAAACCATGGCGTCAAGGTGATCATCGATCCC > NC_002947/980132‑980424 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |