| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,251,603 | Δ1 bp | 6.2% | coding (239/603 nt) | PP_1094 ← | electron transport complex protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,251,603 | 0 | C | . | 6.2% | 260.3 / 10.4 | 81 | coding (239/603 nt) | PP_1094 | electron transport complex protein |
| Reads supporting (aligned to +/- strand): ref base C (38/38); new base . (2/3); total (40/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.60e-01 | |||||||||||
CTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCGCCGGCGATGACCG > NC_002947/1251465‑1251750 | cTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACCGTGCCACTATGGCA‑GGTAAgccaa < 2:331647/149‑3 (MQ=255) tCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCa < 1:299083/148‑1 (MQ=255) tCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCa < 2:280764/148‑1 (MQ=255) cTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGa < 3:269505/149‑1 (MQ=255) tgttgtTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGa > 2:321103/1‑148 (MQ=255) gttgttCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGAGAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATa > 6:272513/1‑149 (MQ=255) ttgttCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACCGTGCCACTATGGCA‑GGTAAgccaa > 6:338872/1‑139 (MQ=255) ttgttCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACCGTGCCACTATGGCA‑GGTAAgccaa < 5:338872/141‑3 (MQ=255) gttCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACg < 2:68896/148‑1 (MQ=255) ttCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGc > 3:109042/1‑149 (MQ=255) tCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCGTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGc > 2:243139/1‑148 (MQ=255) cgaCCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTg > 6:206704/3‑149 (MQ=255) ccTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGc > 4:93310/1‑149 (MQ=255) ccTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGc < 4:358000/149‑1 (MQ=255) ccTGGCTGCCGATCAGCCGGCCCTCCGTGGTGATGGCGACGCGCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCACGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGc < 2:137724/149‑1 (MQ=255) tGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCct > 4:86904/1‑149 (MQ=255) gCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCctct > 3:46318/1‑149 (MQ=255) tGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCtgt > 2:43343/1‑149 (MQ=255) ccGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGAt < 5:363106/128‑1 (MQ=255) ccGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGAt > 6:363106/1‑128 (MQ=255) aTCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTgcggc > 3:365324/1‑149 (MQ=255) gccggccgTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGc > 3:78880/1‑149 (MQ=255) gccgTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTg > 5:207691/1‑149 (MQ=255) ccgtccgtGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTCgg < 4:365324/149‑1 (MQ=255) cgtGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCg > 5:241469/1‑149 (MQ=255) cgtGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCg > 5:236064/1‑149 (MQ=255) gtggtgATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCgg < 4:235921/149‑1 (MQ=255) gtggtgATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCgg > 3:196135/1‑149 (MQ=255) gtgATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCt < 3:56298/149‑1 (MQ=255) tgATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCtt < 2:234970/149‑1 (MQ=255) aTGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTc < 2:372409/149‑1 (MQ=255) gCGACGCTCAGCATGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCa < 1:321103/148‑1 (MQ=255) gACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCCCATTGCATACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGCTTCCGCGAATTGGCCGATGTGCGGGGGGCCTTGGCCGGGGGCTTTACAtgg > 1:98566/1‑149 (MQ=255) cTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTg < 7:42522/149‑1 (MQ=255) gCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTg < 4:78880/149‑1 (MQ=255) cACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTg > 5:137820/1‑148 (MQ=255) cACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGt > 8:347755/1‑149 (MQ=255) cACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGt < 4:196135/149‑1 (MQ=255) cGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCa < 2:111059/149‑1 (MQ=255) cGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCa < 4:46318/149‑1 (MQ=255) gATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCAt < 6:137820/149‑1 (MQ=255) gATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCAt < 2:170924/149‑1 (MQ=255) gATCGGCCCGGCATACCCCTGGGCCTGTGTGAGCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCa > 5:118835/1‑148 (MQ=255) ggCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGt > 3:266033/1‑149 (MQ=255) gCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATa > 1:244662/1‑140 (MQ=255) gCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATa < 2:244662/140‑1 (MQ=255) aTACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCgg < 4:109042/149‑1 (MQ=255) tACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCggg < 1:5934/149‑1 (MQ=255) ccccTGCGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGgca < 2:254186/149‑1 (MQ=255) cccTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATa < 6:286151/134‑1 (MQ=255) cccTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATa > 5:286151/1‑134 (MQ=255) cccTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGgcag > 6:193694/1‑149 (MQ=255) cTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCGTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGt < 4:252782/140‑1 (MQ=255) cTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGt > 3:252782/1‑140 (MQ=255) ccTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGcc < 5:378699/149‑1 (MQ=255) gATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCt > 1:25996/1‑149 (MQ=255) aTCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACCGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTg > 6:279138/1‑149 (MQ=255) cAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGgc > 6:92007/1‑130 (MQ=255) cAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTggc > 1:368971/1‑149 (MQ=255) aGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTgtcg < 4:266033/149‑1 (MQ=255) aTAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTACCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCt > 8:248217/1‑149 (MQ=255) tAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCtt > 3:201785/1‑149 (MQ=255) aTGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTg < 2:98566/149‑1 (MQ=255) ggcggCTTACCGTGCCACTATGGCA‑GGTAAGCCACCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAgg > 6:295421/4‑90 (MQ=21) ggcggCTTACCGTGCCACTATGGCA‑GGTAAGCCACCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAgg < 5:295421/87‑1 (MQ=21) tGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCTTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAgctgc < 8:130715/148‑1 (MQ=255) ggCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCa < 5:11494/142‑1 (MQ=255) ggCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCa > 6:11494/1‑142 (MQ=255) aCC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCa < 3:93310/148‑1 (MQ=255) cctctcATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAgc < 7:344389/144‑1 (MQ=255) tGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAgcgc > 4:1575/1‑149 (MQ=255) gcaaTAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTTCAGCTGCTTTTCAGCGcc > 2:89911/4‑149 (MQ=255) gCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCGcc > 6:44089/1‑149 (MQ=255) gCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCGcc > 4:139890/1‑149 (MQ=255) cATATTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCGCCgg < 7:152269/149‑1 (MQ=255) cATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCGCCgg < 5:206704/149‑1 (MQ=255) aTAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCGCCGGc < 3:139890/149‑1 (MQ=255) gCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCGCCGGCGATgac < 1:43343/149‑1 (MQ=255) gCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAAGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCGCCGGCGATgac > 7:147738/1‑149 (MQ=255) aCGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCGCCGGCGATgaccg > 3:360725/1‑149 (MQ=255) aCGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCGCCGGCGATgaccg < 7:347755/149‑1 (MQ=255) | CTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCGCCGGCGATGACCG > NC_002947/1251465‑1251750 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |