| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,802,073 | Δ1 bp | 5.3% | coding (2057/3525 nt) | dnaEA → | DNA polymerase III subunit alpha |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,802,073 | 0 | T | . | 5.3% | 238.2 / 6.5 | 75 | coding (2057/3525 nt) | dnaEA | DNA polymerase III subunit alpha |
| Reads supporting (aligned to +/- strand): ref base T (27/44); new base . (2/2); total (29/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.38e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTGCGTTGTTCCGCCCGGGCCCGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTCATCGAAGGTTGCGTGGC > NC_002947/1801926‑1802220 | ttGCGTTGTTCCGACCGGTCCCGCTGCAATCGTGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCatcatc < 2:278486/149‑1 (MQ=255) gttgttCCGCCCGGGCCCGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTg > 3:33862/1‑148 (MQ=255) ttCCGCCTGGGCCCGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGACCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGACTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTAc > 3:53173/1‑147 (MQ=255) ttCCGCCCGGGCCCGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCCGCCAACCTACGGCATCATCCTGTAc < 1:196163/148‑1 (MQ=255) ttCCGCCCGGGCCCGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTAcc < 3:47999/148‑1 (MQ=255) ttCCGCCCGGGCCCGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTAc > 4:146869/1‑147 (MQ=255) ttCCGCCCGGGCCCGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCA‑CCTGTTcctg > 2:256839/1‑147 (MQ=255) ccGCCCGGGCCCGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAg < 5:144135/148‑1 (MQ=255) ccGCCCGGGCCCGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAg < 1:235668/148‑1 (MQ=255) ccGCCCGGGCCCGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAg < 1:240953/148‑1 (MQ=255) gCCCGGGCCCGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGa > 8:229330/1‑148 (MQ=255) gCCCGGGCCCGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCT‑GCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAAc < 6:341217/149‑1 (MQ=255) cccGGGCCCGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGaa > 8:320348/1‑148 (MQ=255) ccGGGCCCGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCAAGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGaa > 8:21358/1‑147 (MQ=255) cGGGCCCGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAg < 1:368353/149‑1 (MQ=255) cccGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGa < 2:296427/149‑1 (MQ=255) ccGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAgg > 2:140963/1‑145 (MQ=255) ccGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAgg < 1:140963/145‑1 (MQ=255) cGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATg < 7:229330/149‑1 (MQ=255) cGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATg < 5:142296/149‑1 (MQ=255) gCTGCAATCGGGGATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGc < 3:283175/149‑1 (MQ=255) gCTGCAATCGGGCATGGTGGTCGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCA‑GCTGTTCCTGGTACAGGATGATGc < 2:380351/149‑1 (MQ=255) gCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATg > 6:41426/1‑148 (MQ=255) gCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCA‑CCTGTTCCTGGTACAGGATGATGc < 1:256839/149‑1 (MQ=255) gCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTAAGGAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATg > 7:197812/1‑148 (MQ=255) cAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATg > 2:100767/1‑144 (MQ=255) cAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGa < 1:42414/148‑1 (MQ=255) aaTCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATc < 1:158773/149‑1 (MQ=255) ggCATGGTGGACGACTTCATCAAGCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCa < 4:267589/149‑1 (MQ=255) aTGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGt < 4:33862/149‑1 (MQ=255) ggtggACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGa > 1:300874/1‑149 (MQ=255) acgacTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCa < 1:209548/149‑1 (MQ=255) cgacTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAg < 8:211864/149‑1 (MQ=255) gacTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAgg < 2:300874/149‑1 (MQ=255) ttCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTta > 5:248769/1‑149 (MQ=255) tcaACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATAcc > 5:68580/1‑149 (MQ=255) aaCCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAgg < 7:110936/140‑1 (MQ=255) aaCCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAgg > 8:110936/1‑140 (MQ=255) aCCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTg > 5:136215/1‑149 (MQ=255) ccGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTgg > 2:242204/1‑149 (MQ=255) gCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGt > 3:140809/1‑149 (MQ=255) gCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGt < 7:320348/149‑1 (MQ=255) cAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTg < 4:4203/149‑1 (MQ=255) ggCCGCGCCGAGCTGGCCTACCCGCTCTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCGTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGa < 7:224950/149‑1 (MQ=255) ggCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGc < 8:89222/106‑1 (MQ=255) gcgcCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACAt > 2:210423/1‑148 (MQ=255) cGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACAtgctgc < 2:140059/149‑1 (MQ=255) gCCTACCCGCACTCCGACTACCCGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGc < 7:21358/149‑1 (MQ=255) gCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGGGCCGGGc > 5:357500/1‑149 (MQ=255) gCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCgg < 1:100767/147‑1 (MQ=255) cTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCa > 3:307886/1‑149 (MQ=255) cccGCACTCCGACTAGCAGTTCGATGGCCTCTAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATgg < 4:53173/149‑1 (MQ=255) cccGCACTCCGACTACCAGTACGACGGCCGCAAGCCGTTACTGG‑CGCCAACCTACGCCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATgg < 4:185934/149‑1 (MQ=255) cccGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCAt < 8:2955/147‑1 (MQ=255) cccGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATgg < 6:136215/149‑1 (MQ=255) ccGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGaaa < 7:29291/149‑1 (MQ=255) cGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGaaa > 3:335316/1‑148 (MQ=255) ccAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGccc > 1:140247/1‑148 (MQ=255) cAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCCACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGa < 5:359548/149‑1 (MQ=255) aGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGc < 5:120811/144‑1 (MQ=255) aGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGc > 6:120811/1‑144 (MQ=255) tACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCTGTGCATGGATGGTTATACCGTGGGTGGGGCCGACATGCGCCCCCGGGCCATGGGTAAGAAAAAGccggggg > 2:224984/1‑143 (MQ=255) gAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAAt < 4:322282/149‑1 (MQ=255) aGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATga > 5:339606/1‑148 (MQ=255) aaGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAag < 3:146869/147‑1 (MQ=255) gCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAagcagc < 2:6789/149‑1 (MQ=255) ccGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGt < 6:13875/87‑1 (MQ=255) cTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCggtgg < 4:140809/149‑1 (MQ=255) cTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCggtg < 1:210423/148‑1 (MQ=255) g‑cgcCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGGGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCggtggt < 6:357500/147‑1 (MQ=255) gcCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTCa > 3:93842/1‑149 (MQ=255) ccAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTCAt < 2:140247/149‑1 (MQ=255) ccAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTCAt < 8:197812/149‑1 (MQ=255) gcgatctgCATCA‑CCTGTTCCTGGTACAGGATGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGTGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTCATCg > 3:184230/8‑148 (MQ=38) ccTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTCATCGaa < 6:248769/149‑1 (MQ=255) tACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTCATCGAAgg > 7:91994/1‑149 (MQ=255) catcatCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTCATCGAAGGTTGCg > 6:183420/1‑149 (MQ=255) catcCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTCATCGAAGGTTGCGTgg > 7:34549/1‑149 (MQ=255) atcCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTCATCGAAGGTTGCGTGGc > 1:328043/1‑149 (MQ=255) atcCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTCATCGAAGGTTGCGTGGc < 8:34549/149‑1 (MQ=255) atcCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGACCAAGCAGCGCGGTGGTTTCATCGAAGGTTGCGTgg < 6:339606/148‑1 (MQ=255) tcCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTCATCGAAGGTTGCGTGGc > 3:4831/1‑148 (MQ=255) | TTGCGTTGTTCCGCCCGGGCCCGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCGCGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGG‑CGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTCATCGAAGGTTGCGTGGC > NC_002947/1801926‑1802220 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |