New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 100443 = | 54 (0.900) | 3 (0.060) | 3/230 | NT | 5.7% | intergenic (‑35/+87) | PP_0094/PP_0095 | 5'‑nucleotidase/hypothetical protein |
? | NC_002947 | 100525 = | 53 (1.010) | intergenic (‑117/+5) | PP_0094/PP_0095 | 5'‑nucleotidase/hypothetical protein |
TTTTCTCCTACAGCGCCGGCAACTACGTGAAGCTCAAGGACCAGCACCTGGCCGAAGGCTACGATCAACCTGAATGACCGCATTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/100606‑100443 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcatgcccgcgaaTGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAATGCGCGCTCCTTGTCGTTCAGCAGCCGGGCCTGTTTCACCGGACTGCCCATGTACAGGTAGC > NC_002947/100525‑100669 TTTTCTCCTACAGCGCCGGCAACTACGTGAAGCTCAAGGACCAGCACCTGGCCGAAGGCTACGATCAACCTGAATGACCGCATTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGC > 5:208831/1‑149 TCTCCTACAGCGCCGGCAACTACGTGAAGCTCAAGGACCAGCACCTGGCCGAAGGCTACGATCAACCTGAATGACCGCATTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGG < 7:344895/148‑1 CTACAGCGCCGGCAACTACGTGAAGCTCAAGGACCAGCACCTGGCCGAAGGCTACGATCAACCTGAATGACCGCATTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCAT < 6:357930/148‑1 CTACAGCGCCGGCAACTACGTGAAGCTCAAGGACCAGCACCTGGCCGAAGGCTACGATCAACCTGAATGACCGCATTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCAT < 5:342533/148‑1 ACAGCGCCGGCAACTACGTGAAGCTCAAGGACCAGCACCTGGCCGAAGGCTACGATCAACCTGAATGACCGCATTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCC < 3:98981/149‑1 CAGCGCCGGCAACTACGTGAAGCTCAAGGACCAGCACCTGGCCGAAGGCTACGATCAACCTGAATGACCGCATTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGC < 6:33610/147‑1 GCGCCGGCAACTACGTGAAGCTCAAGGACCAGCACCTGGCCGAAGGCTACGATCAACCTGAATGACCGCATTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGC > 5:205232/1‑149 GCGCCGGCAACTACGTGAAGCTCAAGGACCAGCACCTGGCCGAAGGCTACGATCAACCTGAATGACCGCATTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGC < 5:71986/149‑1 CGCCGGCAACTACGTGAAGCTCAAGGACCAGCACCTGGCCGAAGGCTACGATCAACCTGAATGACCGCATTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCG > 4:261574/1‑149 GGACCAGCACCTGGCCGAAGGCTACGATCAACCTGAATGACCGCATTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGG > 5:242496/1‑114 GGACCAGCACCTGGCCGAAGGCTACGATCAACCTGAATGACCGCATTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGG < 6:242496/114‑1 CATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTA < 2:298858/133‑1 CATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTA > 1:298858/1‑133 ATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGGTTCACGTAGTTGCCGGCGCTGTAGG > 7:251064/1‑149 ATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAATGCGCGCTCCTTGTCGTTCAGCAGCCGGGCCTGTTTCACCGGACTGCCCATGTAC < 8:94261/149‑1 ATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAATGCGCGCTCCTTGTCGTTCAGCAGCCGGGCCTGTTTCACCGGACTGCCCATGTA > 7:2030/1‑148 CGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAATGCGCGCTCCTTGTCGTTCAGCAGCCGGGCCTGTTTCACCGGACTGCCCATGTACAGGTA < 5:295688/149‑1 CGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAATGCGCGCTCCTTGTCGTTCAGCAGCCGGGCCTGTTTCACCGGACTGCCCATGTACAGG > 8:267163/1‑147 CGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAATGCGCGCTCCTTGTCGTTCAGCAGCCGGGCCTGTTTCACCGGACTGCCCATGTACAGGTAGC < 6:71986/149‑1 TTTTCTCCTACAGCGCCGGCAACTACGTGAAGCTCAAGGACCAGCACCTGGCCGAAGGCTACGATCAACCTGAATGACCGCATTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/100606‑100443 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcatgcccgcgaaTGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAATGCGCGCTCCTTGTCGTTCAGCAGCCGGGCCTGTTTCACCGGACTGCCCATGTACAGGTAGC > NC_002947/100525‑100669 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |