New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 135265	79 (1.310)	6 (0.100)	4/254	NT	7.3%	coding (1161/1938 nt)	PP_0129	GGDEF domain‑containing protein
	?	NC_002947	= 135300	76 (1.310)					coding (1196/1938 nt)	PP_0129	GGDEF domain‑containing protein

TGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/135144‑135265 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcTCGCGGGCAGCGGTGCTATTGTCCGCGTGGCCGGCGCTGGCCTCGTGCAGGTGGCTCTGGAAACCTTCCAGGCGTTCATTGAGCTGCTGCAGGTAGGTTTCGAATTCGTGCTGCCCGCTGTCGGTGATCGCCAGCATGAGTACTGC  <  NC_002947/135300‑135155                                                                                                                                                                                                                                                                              TGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCTCGCGGGCAGCGGTGCTATTGTCCGCG                                                                                                                         >  7:70780/1‑149   GATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGC                                                                                                                                                        <  3:29054/116‑1   GATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGC                                                                                                                                                        >  4:29054/1‑116            GCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCTCGCGGGCAGCGGTGCTATTGTCCGCGTGGCCGGCGCT                                                                                                              >  3:113616/1‑149                TACTCATGCTGGCGATCACCGACAGCGGTCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCTCGCGGGCAGCGGTGCTATTGTCCGCGTGGCCGGCGCTGGCC                                                                                                          <  5:21188/149‑1                TACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCTCGCGGGCAGCGGTGCTATTGTCCGCGTGGCCGGCGCTGGCC                                                                                                          <  5:243555/149‑1                  CTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGGCACCTGCACGAGGCCAGCTCGCGGGCAGCGGTGCTATTGTCCGCGTGGCCGGCGCTGGCCTC                                                                                                        <  8:70780/149‑1                  CTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGCTCGCGGGCAGCGGTGCTATTGTCCGCGTGGCCGGCGCTGGCCTC                                                                                                        <  4:113616/149‑1                                                                                                                       CAGCTCGCGGGCAGCGGTGCTATTGTCCGCGTGGCCGGCGCTGGCCTCGTGCAGGTGGCTCTGGAAACCTTCCAGGCGTTCATTGAGCTGCTGCAGGTAGGTTTCGAATTCGTGCTGCCCGCTGTCGGTGATCGCCAGCATGAGTACTG   >  1:362492/1‑149                                                                                                                        AGCTCGCGGGCAGCGGTGCTATTGTCCGCGTGGCCGGCGCTGGCCTCGTGCAGGTGGCTCTGGAAACCTTCCAGGCGTTCATTGAGCTGCTGCAGGTAGGTTTCGAATTCGTGCTGCCCGCTGTCGGTGATCGCCAGCATGAGTACTGC  >  1:193016/1‑149                                                                                                                        AGCTCGCGGGCAGCGGTGCTATTGTCCGCGTGGCCGGCGCTGGCCTCGTGCAGGTGGCTCTGGAAACCTTCCAGGCGTTCATTGAGCTGCTGCAGGTAGGTTTCGAATTCGTGCTGCCCGCTGTCGGTG                      >  3:327382/1‑129                                                                                                                        AGCTCGCGGGCAGCGGTGCTATTGTCCGCGTGGCCGGCGCTGGCCTCGTGCAGGTGGCTCTGGAAACCTTCCAGGCGTTCATTGAGCTGCTGCAGGTAGGTTTCGAATTCGTGCTGCCCGCTGTCGGTG                      <  4:327382/129‑1                                                                                                                                                                                                                                                                              TGGATGACTTGGCAGTACTCATGCTGGCGATCACCGACAGCGGGCAGCACGAATTCGAAACCTACCTGCAGCAGCTCAATGAACGCCTGGAAGGTTTCCAGAGCCACCTGCACGAGGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/135144‑135265 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcTCGCGGGCAGCGGTGCTATTGTCCGCGTGGCCGGCGCTGGCCTCGTGCAGGTGGCTCTGGAAACCTTCCAGGCGTTCATTGAGCTGCTGCAGGTAGGTTTCGAATTCGTGCTGCCCGCTGTCGGTGATCGCCAGCATGAGTACTGC  <  NC_002947/135300‑135155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.