| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 239803 | 46 (0.760) | 3 (0.050) | 3/250 | NT | 5.3% | coding (98/1128 nt) | PP_0188 | uroporphyrin‑III C‑methyltransferase |
| ? | NC_002947 | = 239861 | 64 (1.120) | coding (156/1128 nt) | PP_0188 | uroporphyrin‑III C‑methyltransferase | |||||
TGGCAGCCGTGCAGCGTAGCGCTGCACCTGCCTCTTAAGGCGCTAAGCTGAATGCGGTGCGCCCCCATGCAAAGGATGGATACGTGAGCGAGACTGTCTTGTCCAATAACGATAAACCGTCGGCGCAGGCGCCTGCGGAACCCGTTACCACCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/239650‑239803‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccccGGCCGCACCAAGCAGCAAGGCCA‑GCGCTGCCAGGCCACTGCCGGAGCGCTTGGCAGGTGGGGTGGTAACGGGTTCCGCAGGCGCCTGCGCCGACGGTTTATCGTTATTGGACAAGACAGTCTCGCTCACGTATCCATCCTTTGCATG < NC_002947/239861‑239715 TGGCAGCCGTGCAGCGTAGCGCTGCACCTGCCTCTTAAGGCGCTAAGCTGAATGCGGTGCGCCCCCATGCAAAGGATGGATACGTGAGCGAGACTGTCTTGTCCAATAACGATAAACCGTCGGCGCAGGCGCCTGCGGAACCCGTTAC > 6:45659/1‑148TGGCAGCCGTGCAGCGTAGCGCTGCACCTGCCTCTTAAGGCGCTAAGCTGAATGCGGTGCGCCCCCATGCAAAGGATGGATACGTGAGCGAGACTGTCTTGTCCAATAACGATAAACCGTCGGCGCAGGCGCCTGCGGAACCCGTTAC > 2:154846/1‑148 GCAGCCGTGCAGCGTAGCGCTGCACCTGCCTCTTAAGGCGCTAAGCTGAATGCGGTGCGCCCCCATGCAAAGGATGGATACGTGAGCGAGACTGTCTTGTCCAATAACGATAAACCGTCGGCGCAGGCGCCTGCGGAACCCGTTACCAC > 1:6510/1‑149 GCAGCCGTGCAGCGTAGCGCTGCACCTGCCTCTTAAGGCGCTAAGCTGAATGCGGTGCGCCCCCATGCAAAGGATGGATACGTGAGCGAGACTGTCTTGTCCAATAACGATAAACCGTCGGCGCAGGCGCCTGCGGAACCCGTTACCAC < 2:49425/149‑1 AGCCGTGCAGCGTAGCGCTGCACCTGCCTCTTAAGGCGCTAAGCTGAATGCGGTGCGCCCCCATGCAAAGGATGGATACGTGAGCGAGACTGTCTTGTCCAATAACGATAAACCGTCGGCGCAGGCGCCTGCGGAACCCGTTACCACCC < 8:46132/149‑1 AGCCGTGCAGCGTAGCGCTGCACCTGCCTCTTAAGGCGCTAAGCTGAATGCGGTGCGCCCCCATGCAAAGGATGGATACGTGAGCGAGACTGTCTTGTCCAATAACGATAAACCGTCGGCGCAGGCGCCTGCGGAACCCGTTACCACCC > 3:318292/1‑149 GTGCAGCGTAGCGCTGCACCTGCCTCTTAAGGCGCTAAGCTGAATGCGGTGCGCCCCCATGCAAAGGATGGATACGTGAGCGAGACTGTCTTGTCCAATAACGATAAACCGTCGGCGCAGGCGCCTGCGGAACCCGTTACCACCCCcc > 6:283187/1‑146 GCGCTAAGCTGAATGCGGTGCGCCCCCATGCAAAGGATGGATACGTGAGCGAGACTGTCTTGTCCAATAACGATAAACCGTCGGCGCAGGCGCCTGCGGAACCCGTTACCACCCCGGCCGCACCAAGCAGCAAGGCCA‑GCGCTGCCAGG > 3:143460/1‑149 GGATGGATACGTGAGCGAGACTGTCTTGTCCAATAACGATAAACCGTCGGCGCAGGCGCCTGCGGAACCCGTTACCACCCCGGCCGCACCAAGCAGCAAGGCCA‑GCGCTGACAGGCCACTGCCGGAGCGCTTGGCAGGTGGGGTGGTAA < 8:165812/149‑1 ATGGATACGTGAGCGAGACTGTCTTGTCCAATAACGATAAACCGTCGGCGCAGGCGCCTGCGGAACCCGTTACCACCCCGGCCGCACCAAGCAGCAAGGCCA‑GCGCTGCCAGGCCACTGCCGGAGCGCTTGGCAGGTGGGGTGGTAACG < 4:143460/149‑1 AGACTGTCTTGTCCAATAACGATAAACCGTCGGCGCAGGCGCCTGCGGAACCCGTTACCACC < 2:59872/62‑1 AGACTGTCTTGTCCAATAACGATAAACCGTCGGCGCAGGCGCCTGCGGAACCCGTTACCACC > 1:59872/1‑62 CCACCCCGGCCGCACCAAGCAGCAAGGCCA‑GCGCTGCCAGGCCACTGCCGGAGCGCTTGGCAGGTGGGGTGGTAACGGGTTCCGCAGGCGCCTGCGCCGACGGTGTATCGTTATTGGACAAGACAGTCTCGCTCACGTCTCCATCCTTT > 6:242701/1‑149 CACCCCGGCCGCACCAAGCAGCAAGGCCA‑GCGCTGCCAGGCCACTGCCGGAGCGCTTGGCAGGTGGGGTGGTAACGGGTTCCGCAGGCGCCTGCGCCGACGGTTTATCGTTATTGGACAAGACAGTCTCGCTCACGTATCCATCCTTTG > 5:261339/1‑149 ACCCCGGCCGCACCCAGCAGCAAGGCCA‑GCGCTGCCAGGCCACTGCCGGAGCGCTTGGCAGGTGGGGTGGTAACGGGTGCCGCCGGCGCCTGCGCCGACGGTTTATCGTTATTGGACAAGACAGTCTCGCTCACGTATCCATCCTTTGC < 6:89893/149‑1 ACCCCGGCCGCACCAAGCAGCAAGGCCAGGCGCTGCCAGGCCACTGCCGGAGCGCTTGGCAGGTGGGGTGGTAACGGGTTCCGCAGGCGCCTGCGCCGACGGTTTATCGTTATTGGACAAGACAGTCTCGCTCACGTATCCATCCTTTG > 1:28090/1‑149 ACCCCGGCCGCACCAAGCAGCAAGGCCA‑GCGCTGCCAGGCCACTGCCGGAGCGCTTGGCAGGTGGGGTGGTAACGGGTTCCGCAGGCGCCTGCGCCGACGGTTTATCGTTATTGGACAAGACAGTCTCGCTCACGTATCCATCCTTTG > 6:270771/1‑148 ACCCCGGCCGCACCAAGCAGCAAGGCCA‑GCGCTGCCAGGCCACTGCCGGAGCGCTTGGCAGGTGGGGTGGTAACGGGTTCCGCAGGCGCCTGCGCCGACGGTTTATCGTTATTGGACAAGACAGTCTCGCTCACGTATCCATACTTTG > 4:64473/1‑148 CCCGGCCGCACCAAGCAGCAAGGCCA‑GCGCTGCCAGGCCACTGCCGGAGGGCTTGGCAGGGGGGGTGGTAACGGGTTCCGCTGGCGCCTGCGCCGACGGTTTATCGTTATTGGACAAGACAGTCTCGCTCACGTATCCATCCTTTGCAT < 4:185045/149‑1 CCCGGCCGCACCAAGCAGCAAGGCCA‑GCGCTGCCAGGCCACTGCCGGAGCGCTTGGCAGGTGGGGTGGTAACGGGTTCCGCAGGCGCCTGCGCCGACGGTTTATCGTTATTGGACAAGACAGTCTCGCTCACGGATCCATCCTTTGCAT > 1:366297/1‑149 CCGGCCGCACCAAGCAGCAAGGCCA‑GCGCTGCCAGGCCACTGCCGGAGCGCTTGGCAGGTGGGGTGGTAACGGGTTCCGCAGGCGCCTGCGCCGACGGTTTATCGTTATTGGACAAGACAGTCTCGCTCACGTATCCATCCTTTGCATG > 8:28956/1‑149 TGGCAGCCGTGCAGCGTAGCGCTGCACCTGCCTCTTAAGGCGCTAAGCTGAATGCGGTGCGCCCCCATGCAAAGGATGGATACGTGAGCGAGACTGTCTTGTCCAATAACGATAAACCGTCGGCGCAGGCGCCTGCGGAACCCGTTACCACCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/239650‑239803‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccccGGCCGCACCAAGCAGCAAGGCCA‑GCGCTGCCAGGCCACTGCCGGAGCGCTTGGCAGGTGGGGTGGTAACGGGTTCCGCAGGCGCCTGCGCCGACGGTTTATCGTTATTGGACAAGACAGTCTCGCTCACGTATCCATCCTTTGCATG < NC_002947/239861‑239715 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |