New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 273552 = | 58 (0.960) | 3 (0.050) | 3/250 | NT | 5.6% | coding (216/1110 nt) | metNB | methionine ABC transporter ATP‑binding protein |
? | NC_002947 | 273628 = | 47 (0.820) | coding (140/1110 nt) | metNB | methionine ABC transporter ATP‑binding protein |
CAGGCCCTGCGCCCCGACGTCAATGAAGCCCACGTGCGCTTCATCGGCCTGGGCAAGACCTACCCCGGCCAGGCGCAACCGGCGTTGCAAGGCATCGACCTGAACATCCGCCATGGCGAGATCTTCGGCATCATCGGCCGCAGCGGCGCCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/273704‑273552 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccggtTGCGCCTGGCCGGGGTAGGTCTTGCCCAGGCCGATGAAGCGCACGTGGGCTTCATTGACGTCGGGGCGCAGGGCCTGTTCCCTGGCCATTGGCGGCAGTGCTTGGGGTGTAGGCGCCCTGAGCGCGCTGGCCTGGCTCATTTCAG > NC_002947/273628‑273772 CAGGCCCTGCGCCCCGACGTCAATGAAGCCCACGTGCGCTTCATCGGCCTGGGCAAGACCTACCCCGGCCAGGCGCAACCGGCGTTGCAAGGCATCGACCTGAACATCCGCCATGGCGAGATCTTCGGCATCATCGGCCGCAGCGGCGC < 1:178952/149‑1 GCCCTGCGCCCCGACGTCAATGAAGCCCACGTGCGCTTCATCGGCCTGGGCTAGACCTACCCCGGCCAGGCGCAACCGGCGTTGCAAGGCATCGACCTGAACATCCGCCATGTCGAGATCTTCGGCATCATCGGCCGCAGCGGCGCCGG < 7:243404/149‑1 GCCCTGCGCCCCGACGTCAATGAAGCCCACGTGCGCTTCATCGGCCTGGGCAAGACCTACCCCGGCCAGGCGCAACCGGCGTTGCAAGGCATCGACCTGAACATCCGCCATGGCGAGATCTTCGGCATCATCGGCCGCAGCGGCGCCGG > 5:206564/1‑149 GCCCTGCGCCCCGACGTCAATGAAGCCCACGTGCGCTTCATCGGCCTGGGCAAGACCTACCCCGGCCAGGCGCAACCGGCGTTGCAAGGCATCGACCTGAACATCCGCCATGGCGAGATCTTCGGCATCATCGGCCGCAGCGGCGCCGG > 8:173618/1‑149 CAACCGGCGTTGCAAGGCATCGACCTGAACATCCGCCATGGCGAGATCTTCGGCATCATCGGCCGCAGCGGCGCCGGTTGCGCCTGGCCGGGGTAGGTCTTGCCCAGGCCGATGAAGCGCACGTGGGCTTCATTGACGTCGGGGCGCAG > 2:111498/1‑149 CCGGCGTTGCAAGGCATCGACCTGAACATCCGCCATGGCGAGATCTTCGGCATCATCGGCCGCAGCGGCGCCGGTTGCGCCTGGCCGGGGTAGGTCTTGCCCAGGCCGATGAAGCGCACGTGGGCTTCATTGACGTCGGGGCGCAGGGC > 3:344740/1‑149 CGTTGCAAGGCATCGACCTGAACATCCGCCATGGCGAGATCTTCGGCATCATCGGCCGCAGCGGCGCCGGTTGCGCCTGGCCGGGGTAGGTCTTGCCCAGGCCGATGAAGCGCACGTGGGCTTCATTGACGTCGGGGCGCAGGGCCTGT < 3:35708/149‑1 CCGGTTGCGCCTGGCCGGGGTAGGTCTTGCCCAGGCCGATGAAGCGCACGTGGGCTTCATTGACGTCGGGGCGCAGGGCCTGTTCCCTGGCCATTGGCGGCAGTGCTTGGGGTGTAGGCGCCCTGAGCGCGCTGGCCTGGCTCATTTCA < 5:71911/149‑1 CGGTTGCGCCTGGCCGGGGTAGGTCTTGCCCAGGCCGATGAAGCGCACGTGGGCTTCATTGACGTCGGGGCGCAGGGCCTGTTCCCTGGCCATTGGCGGCAGTGCTTGGGGTGTAGGCGCCCTGAGCGCGCTGGCCTGGCTCATTTCAG > 4:40085/1‑149 CAGGCCCTGCGCCCCGACGTCAATGAAGCCCACGTGCGCTTCATCGGCCTGGGCAAGACCTACCCCGGCCAGGCGCAACCGGCGTTGCAAGGCATCGACCTGAACATCCGCCATGGCGAGATCTTCGGCATCATCGGCCGCAGCGGCGCCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/273704‑273552 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccggtTGCGCCTGGCCGGGGTAGGTCTTGCCCAGGCCGATGAAGCGCACGTGGGCTTCATTGACGTCGGGGCGCAGGGCCTGTTCCCTGGCCATTGGCGGCAGTGCTTGGGGTGTAGGCGCCCTGAGCGCGCTGGCCTGGCTCATTTCAG > NC_002947/273628‑273772 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |