| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 291317 | 79 (1.310) | 4 (0.070) | 4/250 | NT | 5.1% | coding (378/594 nt) | ssuE | NAD(P)H‑dependent FMN reductase subunit |
| ? | NC_002947 | = 291358 | 73 (1.280) | coding (419/594 nt) | ssuE | NAD(P)H‑dependent FMN reductase subunit | |||||
TACAAGGCTTCGTTTTCCGGTGCCCTGAAAACCTTGCTTGACCTGCTGCCCGAGCGCGCCCTGGCCCACAAGATCGTGTTGCCCATCGCCACTGGCGGCAGCATCGCCCACATGCTGGCGGTGGATTACGCATTGAAGCCGGTGCTGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/291168‑291317‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgtcgTCGGCAAAGATCCCTTGCAGGGTCTCTTGTGCCTTGAGTGCCGACAGCACCGGCTTCAATGCGTAATCCACCGCCAGCATGTGGGCGATGCTGCCGCCAGTGGCGATGGGCAACACGATCTTGTGGGCCAGGGCGCGCTCGGGCAGCA < NC_002947/291358‑291211 TACAAGGCTTCGTTTTCCGGTGCCCTGAAAACCTTGCTTGACCTGCTGCCCGAGCGCGCCCTGGCCCACAAGATCGTGTTGCCCATCGCCACTGGCGGCAGCATCGCCCACATGCTGGCGGTGGATTACGCATTGAAGCCGGTGCTGTC > 6:157969/1‑149TACAAGGCTTCGTTTTCCGGTGCCCTGAAAACCTTGCTTGACCTGCTGCCCGAGCGCGCCCTGGCCCACAAGATCGTGTTGCCCATCGCCACTGGCGGCAGCATCGCCCACATGCTGGCGGTGGATTACGCATTGAAGCCGGTGCTGTC > 4:119704/1‑149 ACAAGGCTTCGTTTTCCGGTGCCCTGAAAACCTTGCTTGACCTGCTGCCCGAGCGCGCCCTGGCCCACAAGATCGTGTTGCCCATCGCCACTGGCGGCAGCATCGCCCACATGCTGGCGGTGGATTACGCATTGAAGCCGGTGCTGTCG > 3:370403/1‑149 TGAAAACCTTGCTTGACCTGCTGCCCGAGCGCGCCCTGGCCCACAAGATCGTGTTGCCCATCGCCACTGGCGGCAGCATCGCCCACATGCTGGCGGTGGATTACGCATTGAAGCCGGTGCTGTCGTCGGCAAAGATCCCTTGCAGGGTC > 8:117900/1‑149 ACCTGCTGCCCGAGCGCGCCCTGGCCCACAAGATCGTGTTGCCCATCGCCACTGGCGGCAGCATCGCCCACATGCTGGCGGTGGATTACGCATTGAAGCCGGTGCTGTC < 3:128770/109‑1 ACCTGCTGCCCGAGCGCGCCCTGGCCCACAAGATCGTGTTGCCCATCGCCACTGGCGGCAGCATCGCCCACATGCTGGCGGTGGATTACGCATTGAAGCCGGTGCTGTC > 4:128770/1‑109 TGCCCGAGCGCGCCCTGGCCCACAAGATCGTGTTGCCCATCGCCACTGGCGGCAGCATCGCCCACATGCTGGCGGTGGATTACGCATTGAAGCCGGTGCTGTCGTCGGCAAAGATCCCTTGCAGGGTCTCTTGTGCCTTGAGTGCCGAC < 7:117900/149‑1 CGAGCGCGCCCTGGCCCACAAGATCGTGTTGCCCATCGCCACTGGCGGCAGCATCGCCCACATGCTGGCGGTGGATTACGCATTGAAGCCGGTGCTGTCGTCGGCAAAGATCCCTTGCAGGGTCTCTTGTGCCTTGAGTGCCGACAGCA < 7:233804/149‑1 AGCGCGCCCTGGCCCACAAGATCGTGTTGCCCATCGCCACTGGCGGCAGCATCGCCCACATGCTGGCGGTGGATTACGCATTGAAGCCGGTGCTGTCGTCGGCAAAGATCCCTTGCAGGGTCTCTTGTGCCTTGAGTGCCGACAGCACC < 7:290693/149‑1 GCTGTCGTCGGCAAAGATCCCTTGCAGGGTCTCTTGTGCCTTGAGTGCCGACAGCACCGGCTTCAATGCGTCATCCACCGCCAGCATGTGGGCGATGCTGCCGCCAGTGGCGATGGGCAACACGATCTTGTGGGCCAGGGCGCGCTC < 8:196708/147‑1 GCTGTCGTCGGCAAAGATCCCTTGCAGGGTCTCTTGTGCCTTGAGTGCCGACAGCACCGGCTTCAATGCGTAATCCACCGCCAGCATGTGGGCGATGCTGCCGCCAGTGGCGATGGGCAACACGATCTTGTGGGCCAGGGCGCGCTCGG < 6:34333/149‑1 GCTGTCGTCGGCAAAGATCCCTTGCAGGGTCTCTTGTGCCTTGAGTGCCGACAGCACCGGCTTCAATGCGTAATCCACCGCCAGCATGTGGGCGATGCTGCCGCCAGTGGCGATGGGCAACACGATCTTGTGGGCCAGGGCGCGCTCGG < 1:62222/149‑1 CTGTCGTCGGCAAAGATCCCTTGCAGGGTCTCTTGTGCCTTGAGTGCCGACAGCACCGGCTTCAATGCGTAATCCACCGCCAGCATGTGGGCGATGCTGCCGCCAGTGGCGATGGGCAACACGATCTTGTGGGCCAGGGCGCGCTCGGG < 5:198158/149‑1 CTGTCGTCGGCAAAGATCCCTTGCAGGGTCTCTTGTGCCTTGAGTGCCGACAGCACCGGCTTCAATGCGTAATCCACCGCCAGCATGTGGGCGATGCTGCCGCCAGTGGCGATGGGCAACACGATCTTGTGGGCCAGGGCGCGCTCGGG < 6:327925/149‑1 TGTCGTCGGCAAAGATCCCTTGCAGGGTCTCTTGTGCCTTGAGTGCCGACAGCACCGGCTTCAATGCGTAATCCACCGCCAGCATGTGGGCGATGCTGCCGCCAGTGGCGATGGGCAACACGATCTTGTGGGCCAGGGCGCGCTCGGG > 3:254802/1‑148 TGTCGTCGGCAAAGATCCCTTGCAGGGTCTCTTGTGCCTTGAGTGCCGACAGCACCGGCTTCAATGCGTAATCCACCGCCAGCATGTGGGCGATGCTGCCGCCAGTGGCGATGGGCAACACGATCTTGTGGGCCA > 7:240621/1‑135 TGTCGTCGGCAAAGATCCCTTGCAGGGTCTCTTGTGCCTTGAGTGCCGACAGCACCGGCTTCAATGCGTAATCCACCGCCAGCATGTGGGCGATGCTGCCGCCAGTGGCGATGGGCAACACGATCTTGTGGGCCA < 8:240621/135‑1 TGTCGTCGGCAAAGATCCCTTGCAGGGTCTCTTGTGCCTTGAGTGCCGACAGCACCGGCTTCAATGCGTAATCCACCGCCAGCATGTGGGCGATGCTGCCGCCAGTGGCGATGG < 5:155820/114‑1 TGTCGTCGGCAAAGATCCCTTGCAGGGTCTCTTGTGCCTTGAGTGCCGACAGCACCGGCTTCAATGCGTAATCCACCGCCAGCATGTGGGCGATGCTGCCGCCAGTGGCGATGG > 6:155820/1‑114 GTCGGCAAAGATCCCTTGCAGGGTCTCTTGTGCCTTGAGTGCCGACAGCACCGGCTTCAATGCGTAATCCACCGCCAGCATGTGGGCGATGCTGCCGCCAGTGGCGATGGGCAACACGATCTTGTGGGCCAGGGCGCGCTCGGGCAGCA < 7:266738/149‑1 GTCGGCAAAGATCCCTTGCAGGGTCTCTTGTGCCTTGAGTGCCGACAGCACCGGCTTCAATGCGTAATCCACCGCCAGCATGTGGGCGATGCTGCCGCCAGTGGCGATGGGCAACACGATCTTGTGGGCCAGGGCGCGCTCGGGCAG > 3:267034/1‑147 TACAAGGCTTCGTTTTCCGGTGCCCTGAAAACCTTGCTTGACCTGCTGCCCGAGCGCGCCCTGGCCCACAAGATCGTGTTGCCCATCGCCACTGGCGGCAGCATCGCCCACATGCTGGCGGTGGATTACGCATTGAAGCCGGTGCTGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/291168‑291317‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgtcgTCGGCAAAGATCCCTTGCAGGGTCTCTTGTGCCTTGAGTGCCGACAGCACCGGCTTCAATGCGTAATCCACCGCCAGCATGTGGGCGATGCTGCCGCCAGTGGCGATGGGCAACACGATCTTGTGGGCCAGGGCGCGCTCGGGCAGCA < NC_002947/291358‑291211 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |