New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	324733 =	67 (1.110)	7 (0.120)	6/250	NT	9.6%	coding (19/1320 nt)	oprQ	outer‑membrane porin D
	?	NC_002947	324772 =	69 (1.210)					coding (58/1320 nt)	oprQ	outer‑membrane porin D

GATCTGGTCGTCGGTGCCATGCTTCTTGTCACGGTTGATGTAGGCGTTGCGCAGAAGGACGTTGGCGTGACTGTCCTCGATGAAGCCCTTGCTGTCAGCCTGGTCATTGGCCTGAGCCTGGGTCGCGGCGATCATCGCCAGGGCGA‑CCAGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/324885‑324733 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggctCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGACAAGAAGCATGGCACCGACGACCAGATCGAATGGGGCCAGGCGTTCATCGCCAACTTC  >  NC_002947/324772‑324915                                                                                                                                                                                                                                                                                                            GATCTGGTCGTCGGTGCCATGCTTCTTGTCACGGTTGATGTAGGCGTTGCGCAGAAGGACGTTGGCGTGACTGTCCTCGATGAAGCCCTTGCTGTCAGCCTGGTCATTGGCCTGAGCCTGGGTCGCGGCGATCATCGCCAGGGCGA‑C                                                                                                                                                        >  8:263733/1‑147     TGGTCGTCGGTGCCATGCTTCTTGTCACGGTTGATGTAGGCGTTGCGCAGAAGGACGTTGGCGTGACTGTCCTCGATGAAGCCCTTGCTGTCAGCCTGGTCATTGGCCTGAGCCTGGGTCGCGGCGATCATCGCCAGGGCGA‑CCAGGCT                                                                                                                                                  >  7:307211/1‑149       GTCGTCGGTGCCATGCTTCTTGTCACGGTTGATGTAGGCGTTGCGCAGAAGGACGTTGGCGTGACTGTCCTCGATGAAGCCCTTGCTGTCAGCCTGGTCATTGGCCTGAGCCTGGGTCGCGGCGATCATCGCCAGGGCGA‑CCAGGC                                                                                                                                                   <  8:97146/146‑1       GTCGTCGGTGCCATGCTTCTTGTCACGGTTGATGTAGGCGTTGCGCAGAAGGACGTTGGCGTGACTGTCCTCGATGAAGCCCTTGCTGTCAGCCTGGTCATTGGCCTGAGCCTGGGTCGCGGCGATCATCGCCAGGGCGA‑CCAGG                                                                                                                                                    <  6:64204/145‑1                  CATGCTTCTTGTCACGGTTGATGTAGGCGTTGCGCAGAAGGACGTTGGCGTGACTGTCCTCGATGAAGCCCTTGCTGTCAGCCTGGTCATTGGCCTGAGCCTGGGTCGCGGCGATCATCGCCAGGGCGA‑CCAGG                                                                                                                                                    <  1:335236/134‑1                  CATGCTTCTTGTCACGGTTGATGTAGGCGTTGCGCAGAAGGACGTTGGCGTGACTGTCCTCGATGAAGCCCTTGCTGTCAGCCTGGTCATTGGCCTGAGCCTGGGTCGCGGCGATCATCGCCAGGGCGA‑CCAGG                                                                                                                                                    >  2:335236/1‑134                                       TGTAGGCGTTGCGCAGAAGGACGTTGGCGTGACTGTCCTCGATGAAGCCCTTGCTGTCAGCCTGGTCATTGGCCTGAGCCTGGGTCGCGGCGATCATCGCCAGGGCGA‑CCAGG                                                                                                                                                    >  3:332116/1‑113                                       TGTAGGCGTTGCGCAGAAGGACGTTGGCGTGACTGTCCTCGATGAAGCCCTTGCTGTCAGCCTGGTCATTGGCCTGAGCCTGGGTCGCGGCGATCATCGCCAGGGCGA‑CCAGG                                                                                                                                                    <  4:332116/113‑1                                                                                                                     CCTGGGTCGCGGCGATCATCGCCAGGGCGA‑CCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGAC                                                           <  1:341843/124‑1                                                                                                                     CCTGGGTCGCGGCGATCATCGCCAGGGCGA‑CCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGAC                                                           >  2:341843/1‑124                                                                                                                      CTGGGTCGCGGCGATCATCGCCAGGGCGA‑CCAGGCTCAGGCCAATGACCCGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGACAAGAAGCATGGCACCGACGAC                                      >  6:264492/1‑144                                                                                                                      CTGGGTCGCGGCGATCATCGCCAGGGCGA‑CCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGT                                                              >  4:142198/1‑120                                                                                                                      CTGGGTCGCGGCGATCATCGCCAGGGCGA‑CCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGT                                                              <  3:142198/120‑1                                                                                                                       TGGGTCGCGGCGATCATCGCCAGGGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGACAAGAAGCATGGCACCGACGAC                                      >  8:217960/1‑144                                                                                                                          GTCGCGGCGATCATCGCCAGGGCGA‑CCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGACAAGAAGCATGGCACCGACGACCAGATCGAA                             >  1:73901/1‑149                                                                                                                                              GGCGA‑CCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGACAAGAAGCATGGCACCGACGACCAGATCGAATGGGGCCAGGCGTTCATCGC         <  2:73901/149‑1                                                                                                                                                      AGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGACAAGAAGCATGGCACCGACGACCAGATCGAATGGGGCCAGGCGTTCATCGCCAACTTC  >  8:114864/1‑149                                                                                                                                                                                                                                                                                                            GATCTGGTCGTCGGTGCCATGCTTCTTGTCACGGTTGATGTAGGCGTTGCGCAGAAGGACGTTGGCGTGACTGTCCTCGATGAAGCCCTTGCTGTCAGCCTGGTCATTGGCCTGAGCCTGGGTCGCGGCGATCATCGCCAGGGCGA‑CCAGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/324885‑324733 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggctCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGACAAGAAGCATGGCACCGACGACCAGATCGAATGGGGCCAGGCGTTCATCGCCAACTTC  >  NC_002947/324772‑324915

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.