| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 326515 = | 56 (0.930) | 3 (0.050) | 3/246 | NT | 5.4% | coding (1218/1668 nt) | PP_0269 | glutamate synthase large subunit |
| ? | NC_002947 | 326560 = | 52 (0.930) | coding (1173/1668 nt) | PP_0269 | glutamate synthase large subunit | |||||
TCAGCGACAACATGGGCGTGCCGATGCGCGAAGGCTTGATGTTCGTGCACAACACGTTGGTCGGCCTGAACCTGCGCTCCAGCATCCGCATTGGTGCGGCGGGCAAGATCGTCAGCGCCTTCGACATTGCCAGCGTATTGGCCATCGGCGCTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/326669‑326515‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgctgacGATCTTGCCCGCCGCACCAATGCGGATGCTGGAGCGCAGGTTCAGGCCGACCAACGTGTTGTGCACGAACATCAAGCCTTCGCGCATCGGCACGCCCATGTTGTCGCTGAACTCGCGAGGTGCCGCGCCGGTGCCGCCTTCCTTGCC > NC_002947/326560‑326706 TCAGCGACAACATGGGCGTGCCGATGCGCGAAGGCTTGATGTTCGTGCACAACACGTTGGTCGGCCTGAACCTGCGCTCCAGCATCCGCATTGGTGCGGCGGGCAAGATCGTCAGCGCCTTCGACATTGCCAGCGTATTGGCCATCGGC > 7:310887/1‑149 CAGCGACAACATGGGCGTGCCGATGCGCGAAGGCTTGATGTTCGTGCACAACACGTTGGTCGGCCTGAACCTGCGCTCCAGCATCCGCATTGGTGCGGCGGGCAAGATCGTCAGCGCCTTCGACATTGCCAGCGTATTGGCCATCGGCG > 6:296436/1‑149 CGACAACATGGGCGTGCCGATGCGCGAAGGCTTGATGTTCGTGCACAACACGTTGGTCGGCCTGAACCTGCGCTCCAGCATCCGCATTGGTGCGGCGGGCAAGATCGTCAGCGCCTTCGACATTGCCAGCGTATTGGCCATCGGCGCT > 3:305245/1‑148 GACAACATGGGCGTGCCGATGCGCGAAGGCTTGATGTTCGTGCACAACACGTTGGTCGGCCTGAACCTGCGCTCCAGCATCCGCATTGGTGCGGCGGGCAAGATCGTCAGCGCCTTCGACATTGCCAGCGTATTGGCCATCGGCGCTGA < 8:163431/149‑1 TCGTCAGCGCCTTCGACATTGCCAGCGTATTGGCCATCGGCGCTGACGATCTTGCCCGCCGCACCAATGCGGATGCTGGAGCGCAGGTTCAGGCCGACCAACGTGTTGTGCACGAACATCAAGCCTTCGCGCATCGGCACGCCC < 5:342487/144‑1 TCGTCAGCGCCTTCGACATTGCCAGCGTATTGGCCATCGGCGCTGACGATCTTGCCCGCCGCACCAATGCGGATGCTGGAGCGCAGGTTCAGGCCGACCAACGTGTTGTGCACGAACATCAAGCCTTCGCGCATCGGCACGCCC > 6:342487/1‑144 TCAGCGCCTTCGACATTGCCAGCGTATTGGCCATCGGCGCTGACGATCTTGCCCGCCGCACCAATGCGGATGCTGGAGCGCAGGTTCAGGCCGACCAACGTGTTGTGCACGAACATCAAGCCTTCGCGCATCGGCACGCCCATGTTGTC > 5:128381/1‑149 GCTGACGATCTTGCCCGCCGCACCAATGCGGATGCTGGAGCGCAGGTTCAGGCCGACCAACGTGTTGTGCACGAACATCAAGCCTTCGCGCATCGGCACGCCCATGTTGTCGCTGAACTCGCGAGGTGCCGCGCCGGTGCCGCCTTCCT < 4:22085/149‑1 GCTGACGATCTTGCCCGCCGCACCAATGCGGATGCTGGAGCGCAGGTTCAGGCCGACCAACGTGTTGTGCACGAACATCAAGCCTTCGCGCATCGGCACGCCCATGTTGTCGCTGAACTCGCGAGGTGCCGCGCCGGTGCCGCCTTCCT > 6:252597/1‑149 TGACGATCTTGCCCGCCGCACCAATGCGGATGCTGGAGCGCAGGTTCAGGCCGACCAACGTGTTGTGCACGAACATCAAGCCTTCGCGCATCGGCACGCCCATGTTGTCGCTGACCTCGCGAGGTGCCGCGCCGGTGCCGCCTTCCTTG > 2:87291/1‑149 ACGATCTTGCCCGCCGCACCAATGCGGATGCTGGAGCGCAGGTTCAGGCCGACCAACGTGTTGTGCACGAACATCAAGCCTTCGCGCATCGGCACGCCCATGTTGTCGCTGAACTCGCGAGGTGCCGCGCCGGTGCCGCCTTCCTTGCC < 6:128381/149‑1 TCAGCGACAACATGGGCGTGCCGATGCGCGAAGGCTTGATGTTCGTGCACAACACGTTGGTCGGCCTGAACCTGCGCTCCAGCATCCGCATTGGTGCGGCGGGCAAGATCGTCAGCGCCTTCGACATTGCCAGCGTATTGGCCATCGGCGCTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/326669‑326515‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgctgacGATCTTGCCCGCCGCACCAATGCGGATGCTGGAGCGCAGGTTCAGGCCGACCAACGTGTTGTGCACGAACATCAAGCCTTCGCGCATCGGCACGCCCATGTTGTCGCTGAACTCGCGAGGTGCCGCGCCGGTGCCGCCTTCCTTGCC > NC_002947/326560‑326706 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |