| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 476264 = | 76 (1.260) | 4 (0.070) | 4/248 | NT | 5.7% | coding (556/1026 nt) | tsaD | tRNA N6‑adenosine(37)‑threonylcarbamoyltransferase complex transferase subunit TsaD |
| ? | NC_002947 | 476325 = | 61 (1.080) | coding (617/1026 nt) | tsaD | tRNA N6‑adenosine(37)‑threonylcarbamoyltransferase complex transferase subunit TsaD | |||||
CAACGGGTTTGCTCACTGTCGTCGCCAGCATTCTTGCATTGCTGCCAGGTGTTCAGGGCGAAGGTCTTGAGGCCACTGAAGCTGAATTCCAGGCCTGGCCGATCGGTCATTGGCCGCGGGAACACGAAGCGCCCAGGCACACCTTGCTCGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/476418‑476264‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggccagGCCTGGAATTCAGCTTCAGTGGCCTCAAGACCTTCGCCCTGAACACCTGGCAGCAATGCAAGAATGCTGGCGACGACAGTGAGCAAACCCGTTGCGACCTGTCCCTGGCATTCCAGCAGGCGGTGGTGGAGACTTTGACCATCAAGT > NC_002947/476325‑476471 CAACGGGTTTGCTCACTGTCGTCGCCAGCATTCTTGCATTGCTGCCAGGTGTTCAGGGCGAAGGTCTTGAGGCCACTGAAGCTGAATTCCAGGCCTGGCCGATCGGTCATTGGCCGCGGGAACACGAAGCGCCCAGGCACACCTTGCTC > 3:164080/1‑149 GGTTTGCTCACTGTCGTCGCCAGCATTCTTGCATTGCTGCCAGGTGTTCAGGGCGAAGGTCTTGAGGCCACTGAAGCTGAATTCCAGGCCTGGCCGATCGGTCATTGGCCGCGGGAACACGAAGCGCCCAGGCACACCTTGCTCGGCCA < 7:3064/149‑1 CAGGCCTGGCCGATCGGTCATTGGCCGCGGGAACACGAAGCGCCCAGGCACACCTTGCTCGGCCAGGCCTGGAATTCAGCTTCAGTGGCCTCAAGACCTTCGCCCTGAACACCTGGCAGCAATGCAAGAATGCTGGCGACGACAGTGAG > 8:308976/1‑149 GCCTGGCCGATCGGTCATTGGCCGCGGGAACACGAAGCGCCCAGGCACACCTTGCTCGGCCAGGCCTGGAATTCAGCTTCAGTGGCCTCAAGACCTTCGCCCTGAACACCTGGCAGCAATGCAAGAATGCTGGCGACGACAGTGAGCA > 1:189872/1‑148 GGTCATTGGCCGCGGGAACACGAAGCGCCCAGGCACACCTTGCTCGGCCAGGCCTGGAATTCAGCTTCAGTGGCCTCAAGACCTTCGCCCTGAACACCTGGCAGCAATGCAAGAATGCTGGCGACGACAGTGAGCAAACCCGTTGCGAC < 2:189872/149‑1 GGTCATTGGCCGCGGGAACACGAAGCGCCCAGGCACACCTTGCTCGGCCAGGCCTGGAATTCAGCTTCAGTGGCCTCAAGACCTTCGCCCTGAACACCTGGCAGCAATGCAAGAATGCTGGCGACGACAGTGAGCAAACCCGTTGCGA < 7:308976/148‑1 TCATTGGCCGCGGGAACACGAAGCGCCCAGGCACACCTTGCTCGGCC > 1:322799/1‑47 TCATTGGCCGCGGGAACACGAAGCGCCCAGGCACACCTTGCTCGGCC < 2:322799/47‑1 GCCAGGCCTGGAATTCAGCTTCAGTGGCCTCAAGACCTTCGCCCTGAACACCTGGCAGCAATGCAAGAATGCTGTCGACGACAGTGAGCAAACCCGTTGCGACCTGTCCCTGGCATTCCAGCAGGCGGTGGTGGAGACTTTGACCATC > 5:306363/1‑148 GCCAGGCCTGGAATTCAGCTTCAGTGGCCTCAAGACCTTCGCCCTGAACACCTGGCAGCAATGCAAGAATGCTGGCGACGACAGTGAGCAAACCCGTTGCGACCTGTCCCTGGCATTCCAGCAGGCGGTGGTGGAGA > 5:253098/1‑137 GCCAGGCCTGGAATTCAGCTTCAGTGGCCTCAAGACCTTCGCCCTGAACACCTGGCAGCAATGCAAGAATGCTGGCGACGACAGTGAGCAAACCCGTTGCGACCTGTCCCTGGCATTCCAGCAGGCGGTGGTGGAGA < 6:253098/137‑1 AGGCCTGGAATTCAGCTTCAGTGGCCTCAAGACCTTCGCCCTGAACACCTGGCAGCAATGCAAGAATGCTGGCGACGACAGTGAGCAAACCCGTTGCGACCTGTCCCTGGCATTCCAGCAGGCGGTGGTGGAGACTTTGACCATCAAGT < 7:233164/149‑1 CAACGGGTTTGCTCACTGTCGTCGCCAGCATTCTTGCATTGCTGCCAGGTGTTCAGGGCGAAGGTCTTGAGGCCACTGAAGCTGAATTCCAGGCCTGGCCGATCGGTCATTGGCCGCGGGAACACGAAGCGCCCAGGCACACCTTGCTCGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/476418‑476264‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggccagGCCTGGAATTCAGCTTCAGTGGCCTCAAGACCTTCGCCCTGAACACCTGGCAGCAATGCAAGAATGCTGGCGACGACAGTGAGCAAACCCGTTGCGACCTGTCCCTGGCATTCCAGCAGGCGGTGGTGGAGACTTTGACCATCAAGT > NC_002947/476325‑476471 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |