New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	524240 =	46 (0.760)	4 (0.100) +TGCAGCGCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACA	3/172	NT	8.5%	intergenic (+107/‑709)	tyrS/PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
	?	NC_002947	= 697255	86 (1.430)					intergenic (+182/‑569)	mmsA‑I/PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA

GCAAGGGTTGTGGCGGACACATCTCACCGCCAACACCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/524278‑524240 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCAGCGCCTGTGAGACCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCACTG  <  NC_002947/697255‑697200                                        ||||||||||||||||||||||||||||||||||||||||||||||                                                         GCAAGGGTTGTGGCGGACACATCTCACCGCCAACACCCTTGCAGCGCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTG  >  3:68113/1‑141 GCAAGGGTTGTGGCGGACACATCTCACCGCCAACACCCTTGCAGCGCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTG  <  4:68113/141‑1  CAAGGGTTGTGGCGGACACATCTCACCGCCAACACCCTTGCAGCGCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCAt          >  1:142827/1‑131  CAAGGGTTGTGGCGGACACATCTCACCGCCAACACCCTTGCAGCGCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCAt          <  2:142827/132‑2                                        ||||||||||||||||||||||||||||||||||||||||||||||                                                         GCAAGGGTTGTGGCGGACACATCTCACCGCCAACACCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/524278‑524240 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCAGCGCCTGTGAGACCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCACTG  <  NC_002947/697255‑697200

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.